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The map label for this gene is yeeY [H]

Identifier: 119774707

GI number: 119774707

Start: 1914689

End: 1915603

Strand: Direct

Name: yeeY [H]

Synonym: Sama_1570

Alternate gene names: 119774707

Gene position: 1914689-1915603 (Clockwise)

Preceding gene: 119774702

Following gene: 119774708

Centisome position: 44.46

GC content: 55.3

Gene sequence:

>915_bases
ATGCGCATCGATGTGGATGCCTTTAAGGTATTGGAAGTGCTGGTAGAAGAGGGCAGCTTTGCCAAGGCGGCGGAGCGGCT
GCACAAGGCCCAGTCGGCGGTGAGTTACCAGATTAAAAAGCTTGAGCAGCATCTCGGCGTTAGCCTGTTATCCCGGGAGC
AATACCGCGCAGAGCTCACCGCCGAAGGGCGGGTAATCCTCGCGGAAGGCCAGCGGCTGTTGTCGCACCTCGCCAATATC
GAGCACCTGGCGAGCCGTTTCAGTGAGGGGTGGGAGCCCAAGCTGGAGCTGGTAATTGATGGCGCCTTGCCCATGGAGCC
GATCATGACGGCGCTTAAACGTATGGCCGAGCATCAAATTCCCACCAAAATTCAGCTCAATATGGAGTTCCTTGGCGGGG
TGCAGCACAGATTCGAGCGCGACAATGCCGATTTGATGCTGGTAAAAGACTATCGCACCGGCCCCTATTATTATGCCAAG
CCATTGCCCGCCATCACCAGCGTGTTGCTGGCGGCCCCTCATCATCCGCTGGCGGGGCGTAAAGCCCTTACCCTCACCGA
GCTGCAGCAACACGTAGAGCTGACCATTGAAGACTCATCGCCGGTCAAAACCTACCGTGATGAGCTGCAGTTTGGCGGTG
ACAAGGTATTTTATCTCTCTGGTTTTATTATGAAAAAGAACGCGCTGTTAAAAGGATTGGGTTTTGGTTGGATGCCCGAC
TTTTTGGTGCGCGATGAGCTTAAAGCGGGTCTGCTTACTGAAATCGACTTTGTGGGCGGTAGCCGTTACACCTTCGTGCC
GCAGTTGGTCTCTACGCTGGAACGCCCCCTGGGCCGCGCCGGCAGGCTATTTACAGAACTGATATTGGAAGAATTTGCCA
AAGAACCCATGGGGATACCAGAGGGGCTGGGTTAA

Upstream 100 bases:

>100_bases
GTACAAAAAAAAGAATAATTAATCGGTAATCATCATCTAAAAATTAGATGGTAAAGGTGGCGTTACGTTTTTGTTCATTG
TCTGACCCGGGAGAGCGCCG

Downstream 100 bases:

>100_bases
CACCTTACTTGAGTTGTTGACACAGTTGTTTACATTTCGGCTCTGACAAATGACATATTATGTCGTATGTTGAGCCACAT
CCGTAAAACGTCAGATGGGG

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MRIDVDAFKVLEVLVEEGSFAKAAERLHKAQSAVSYQIKKLEQHLGVSLLSREQYRAELTAEGRVILAEGQRLLSHLANI
EHLASRFSEGWEPKLELVIDGALPMEPIMTALKRMAEHQIPTKIQLNMEFLGGVQHRFERDNADLMLVKDYRTGPYYYAK
PLPAITSVLLAAPHHPLAGRKALTLTELQQHVELTIEDSSPVKTYRDELQFGGDKVFYLSGFIMKKNALLKGLGFGWMPD
FLVRDELKAGLLTEIDFVGGSRYTFVPQLVSTLERPLGRAGRLFTELILEEFAKEPMGIPEGLG

Sequences:

>Translated_304_residues
MRIDVDAFKVLEVLVEEGSFAKAAERLHKAQSAVSYQIKKLEQHLGVSLLSREQYRAELTAEGRVILAEGQRLLSHLANI
EHLASRFSEGWEPKLELVIDGALPMEPIMTALKRMAEHQIPTKIQLNMEFLGGVQHRFERDNADLMLVKDYRTGPYYYAK
PLPAITSVLLAAPHHPLAGRKALTLTELQQHVELTIEDSSPVKTYRDELQFGGDKVFYLSGFIMKKNALLKGLGFGWMPD
FLVRDELKAGLLTEIDFVGGSRYTFVPQLVSTLERPLGRAGRLFTELILEEFAKEPMGIPEGLG
>Mature_304_residues
MRIDVDAFKVLEVLVEEGSFAKAAERLHKAQSAVSYQIKKLEQHLGVSLLSREQYRAELTAEGRVILAEGQRLLSHLANI
EHLASRFSEGWEPKLELVIDGALPMEPIMTALKRMAEHQIPTKIQLNMEFLGGVQHRFERDNADLMLVKDYRTGPYYYAK
PLPAITSVLLAAPHHPLAGRKALTLTELQQHVELTIEDSSPVKTYRDELQFGGDKVFYLSGFIMKKNALLKGLGFGWMPD
FLVRDELKAGLLTEIDFVGGSRYTFVPQLVSTLERPLGRAGRLFTELILEEFAKEPMGIPEGLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082024, Length=296, Percent_Identity=26.3513513513513, Blast_Score=108, Evalue=6e-25,
Organism=Escherichia coli, GI1789492, Length=274, Percent_Identity=27.3722627737226, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1786713, Length=246, Percent_Identity=27.2357723577236, Blast_Score=85, Evalue=6e-18,
Organism=Escherichia coli, GI1786508, Length=240, Percent_Identity=27.9166666666667, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1787949, Length=247, Percent_Identity=23.4817813765182, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI1786401, Length=267, Percent_Identity=27.7153558052434, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1790262, Length=259, Percent_Identity=25.8687258687259, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI87082132, Length=306, Percent_Identity=24.1830065359477, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 34170; Mature: 34170

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIDVDAFKVLEVLVEEGSFAKAAERLHKAQSAVSYQIKKLEQHLGVSLLSREQYRAELT
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHC
AEGRVILAEGQRLLSHLANIEHLASRFSEGWEPKLELVIDGALPMEPIMTALKRMAEHQI
CCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCC
PTKIQLNMEFLGGVQHRFERDNADLMLVKDYRTGPYYYAKPLPAITSVLLAAPHHPLAGR
CCEEEECHHHHHHHHHHHCCCCCCEEEEEECCCCCEEECCCHHHHHHHHHHCCCCCCCCC
KALTLTELQQHVELTIEDSSPVKTYRDELQFGGDKVFYLSGFIMKKNALLKGLGFGWMPD
CHHHHHHHHHHHEEEECCCCCHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHCCCCCCCH
FLVRDELKAGLLTEIDFVGGSRYTFVPQLVSTLERPLGRAGRLFTELILEEFAKEPMGIP
HHHHHHHHCCHHHHEEECCCCCEEHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCC
EGLG
CCCC
>Mature Secondary Structure
MRIDVDAFKVLEVLVEEGSFAKAAERLHKAQSAVSYQIKKLEQHLGVSLLSREQYRAELT
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHC
AEGRVILAEGQRLLSHLANIEHLASRFSEGWEPKLELVIDGALPMEPIMTALKRMAEHQI
CCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCC
PTKIQLNMEFLGGVQHRFERDNADLMLVKDYRTGPYYYAKPLPAITSVLLAAPHHPLAGR
CCEEEECHHHHHHHHHHHCCCCCCEEEEEECCCCCEEECCCHHHHHHHHHHCCCCCCCCC
KALTLTELQQHVELTIEDSSPVKTYRDELQFGGDKVFYLSGFIMKKNALLKGLGFGWMPD
CHHHHHHHHHHHEEEECCCCCHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHCCCCCCCH
FLVRDELKAGLLTEIDFVGGSRYTFVPQLVSTLERPLGRAGRLFTELILEEFAKEPMGIP
HHHHHHHHCCHHHHEEECCCCCEEHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCC
EGLG
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]