| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is 119774604
Identifier: 119774604
GI number: 119774604
Start: 1776409
End: 1776789
Strand: Direct
Name: 119774604
Synonym: Sama_1467
Alternate gene names: NA
Gene position: 1776409-1776789 (Clockwise)
Preceding gene: 119774603
Following gene: 119774605
Centisome position: 41.25
GC content: 57.74
Gene sequence:
>381_bases ATGAACATGGGATTACTTGGGGTGGCGGTGCTTGCCATGGGCTATGTGGTCTGGCTTTGGCGCTGTGTCAGGACGGAATC TCCGGCTCTGCCTCAGGGCACGTTACACTCGGGCCTCGCCAGTGCCCTTGTCCTGCTGCTGACCTGCGTAAACTTGATGC TGCTCGGGGCTACGCTCAATCTCTTTTCGCCAACTCAGGCGATGATGCTCTGCTGCGTGTTTTCCCTCGTTTACGGAGTT CAAGCGGTGTGGCTTGCCGGACTCGCCTGGCTGGAGGAGTTACCCCAAATCATGGGGAGTCGCTGGCTGTGGTTGGGGAG TGGTGCGCTTTGCCTTGCCAGTTTGCTTGCCTGCGGCCTCTTCGATTCAATCTCTTTGTAA
Upstream 100 bases:
>100_bases TTGTTCCCAGCCAGACCCAGGGGCTCTGGAGAAAGGAATGTGTTGGGCTCATATCACAGTGAAGTGAAGGTAACAGTACA AGAGATAAAGGAGGTTGGGG
Downstream 100 bases:
>100_bases TGAAACGTAAATCTCTATTGCAAAGCGGGGGGATTTATAAGAAAACAGGGGCATTAAATCGAATACCATCACATAAACGT CCAGGATAGGACGTAAGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MNMGLLGVAVLAMGYVVWLWRCVRTESPALPQGTLHSGLASALVLLLTCVNLMLLGATLNLFSPTQAMMLCCVFSLVYGV QAVWLAGLAWLEELPQIMGSRWLWLGSGALCLASLLACGLFDSISL
Sequences:
>Translated_126_residues MNMGLLGVAVLAMGYVVWLWRCVRTESPALPQGTLHSGLASALVLLLTCVNLMLLGATLNLFSPTQAMMLCCVFSLVYGV QAVWLAGLAWLEELPQIMGSRWLWLGSGALCLASLLACGLFDSISL >Mature_126_residues MNMGLLGVAVLAMGYVVWLWRCVRTESPALPQGTLHSGLASALVLLLTCVNLMLLGATLNLFSPTQAMMLCCVFSLVYGV QAVWLAGLAWLEELPQIMGSRWLWLGSGALCLASLLACGLFDSISL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13489; Mature: 13489
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 10.3 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 10.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMGLLGVAVLAMGYVVWLWRCVRTESPALPQGTLHSGLASALVLLLTCVNLMLLGATLN CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFSPTQAMMLCCVFSLVYGVQAVWLAGLAWLEELPQIMGSRWLWLGSGALCLASLLACGL HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHH FDSISL HHHCCC >Mature Secondary Structure MNMGLLGVAVLAMGYVVWLWRCVRTESPALPQGTLHSGLASALVLLLTCVNLMLLGATLN CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFSPTQAMMLCCVFSLVYGVQAVWLAGLAWLEELPQIMGSRWLWLGSGALCLASLLACGL HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHH FDSISL HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA