Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119774603

Identifier: 119774603

GI number: 119774603

Start: 1775777

End: 1776190

Strand: Direct

Name: 119774603

Synonym: Sama_1466

Alternate gene names: NA

Gene position: 1775777-1776190 (Clockwise)

Preceding gene: 119774602

Following gene: 119774604

Centisome position: 41.24

GC content: 55.8

Gene sequence:

>414_bases
ATGGCTTCAATGCGCGTTACATTTTCCCGTCTTTTAGTCTCCCTCGGCCTGACGGCAGCCATCAGTGTGCCCGCGCTGGC
AGGCGAAGCCGAAAAAGCCCTGGCAGGTGAGCTGCTGGAATGTGCGGCCTATTATCAAATCAGCTCAGAGGCCATTGCCG
CCATGAATGCCCCCCAAATGCAGGCCGTGGGCGAGCGTCTTAAGGCCTCTGCCGATGAAAGTTTGGCACTGGCAGGCAAA
TATTATGAAGGCGATGTGGATGCGGCGCTCAAAGATACCCGCGACAGGCAGATAGCGTCCATGGCGGGCTCCTCCAGTCT
TGGTAACCTGATGGCCAAGTACAAAGAAAGCTGCAAGACCTTGTTGGCAAATCCCAATGCCAGGCTCGAATACTGGCAGA
TGGCGACCATGTAA

Upstream 100 bases:

>100_bases
GGCAAATGGCGGTCTCAGGTAAGGCTTACGGCAATCAAGACTTGATTCTCGTCCACCGCTTCGTGTAGTTTTGCCAAAAA
CCTTGAAGGAAATCACAGTT

Downstream 100 bases:

>100_bases
CCCCATCGCCAATTCGTTTCCCCAAACGCCCGTAAGGGCGTTTTTTATGGGTTAGCGAAAGCCTTTACGCCCCGGCGCTG
TCTATATCGTTAAGACCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MASMRVTFSRLLVSLGLTAAISVPALAGEAEKALAGELLECAAYYQISSEAIAAMNAPQMQAVGERLKASADESLALAGK
YYEGDVDAALKDTRDRQIASMAGSSSLGNLMAKYKESCKTLLANPNARLEYWQMATM

Sequences:

>Translated_137_residues
MASMRVTFSRLLVSLGLTAAISVPALAGEAEKALAGELLECAAYYQISSEAIAAMNAPQMQAVGERLKASADESLALAGK
YYEGDVDAALKDTRDRQIASMAGSSSLGNLMAKYKESCKTLLANPNARLEYWQMATM
>Mature_136_residues
ASMRVTFSRLLVSLGLTAAISVPALAGEAEKALAGELLECAAYYQISSEAIAAMNAPQMQAVGERLKASADESLALAGKY
YEGDVDAALKDTRDRQIASMAGSSSLGNLMAKYKESCKTLLANPNARLEYWQMATM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14561; Mature: 14430

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASMRVTFSRLLVSLGLTAAISVPALAGEAEKALAGELLECAAYYQISSEAIAAMNAPQM
CCCHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
QAVGERLKASADESLALAGKYYEGDVDAALKDTRDRQIASMAGSSSLGNLMAKYKESCKT
HHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LLANPNARLEYWQMATM
HHCCCCCCEEHHEECCC
>Mature Secondary Structure 
ASMRVTFSRLLVSLGLTAAISVPALAGEAEKALAGELLECAAYYQISSEAIAAMNAPQM
CCHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
QAVGERLKASADESLALAGKYYEGDVDAALKDTRDRQIASMAGSSSLGNLMAKYKESCKT
HHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LLANPNARLEYWQMATM
HHCCCCCCEEHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA