| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is 119774602
Identifier: 119774602
GI number: 119774602
Start: 1775050
End: 1775670
Strand: Direct
Name: 119774602
Synonym: Sama_1465
Alternate gene names: NA
Gene position: 1775050-1775670 (Clockwise)
Preceding gene: 119774598
Following gene: 119774603
Centisome position: 41.22
GC content: 57.0
Gene sequence:
>621_bases ATGTACCAAGGAACCCCAATGTTGAATGTCACTGCGCCGCAGCTATCCGGCGAGCTTGTCGTCCTGGAACCCCTCAGCCT AAATCATGTCCCGGCACTGCAATTGGCGGCCGCCGACGGCAAGCTGTGGGAGCTGTGGTTTACCAGTGTGCCTGACCCTG ATGGTGTAAAGGCGTACGTCGAGAAAGCGCTGGCGCAGCAAGCGCAGGGCAGTGCGATTCCCTTTGCCGTCAGGGCGCGT CATAGTGGCGAAGTGGTGGGCTGTACCCGTATTTGTAACCGGGTATTGGAGCACAGACGGGCGGAAATTGGTTACACCTG GTATGGCAAGAGTGTGCAGCGCAGTGGCATCAACACAGAGACCAAGTTGCTGCTGCTCGATTACTGCTTTAGCGAACTCG ATTGCATCGCCGTTGAGTTTCGAACTCACTGGCATAATCAGGCCTCCCGAGAGGCCATCGCCCGTTTGGGTGCGAGACAG GACGGTGTGCTGAGAAATCACCAAATCCTCAAAGACGGCACCTTGAGAGACACAGTGGTGTTTTCGCTGTTGGATTCAGA GTGGCCAGCAGCGCGCAAGCACTTGCGGTTTCGCCTGGCACGGCACGCCAGCGAGTTATAA
Upstream 100 bases:
>100_bases TCGGATTTACGAGGACATCAAGGGTATTGGATGAAGGGCATTTATTTTGGTCGTCTCTATGATTTCATCAGCTTTTTCTG ATAAAACAGGAAAGAATCTC
Downstream 100 bases:
>100_bases AGCGCTGGCAAATGGCGGTCTCAGGTAAGGCTTACGGCAATCAAGACTTGATTCTCGTCCACCGCTTCGTGTAGTTTTGC CAAAAACCTTGAAGGAAATC
Product: acetyltransferase
Products: NA
Alternate protein names: Acetyltransferase; GNAT Family Acetyltransferase; Acetyltransferase GNAT Family; Amino-Acid Acetyltransferase; Acetyltransferase Gnat Family; Gcn5-Related N-Acetyltransferase; GCN5-Like N-Acetyltransferase; Acetyltransferase/N-Acetylase; Acetyltransferase Protein; Amino-Acid Acetyltransferase Transmembrane Protein; Ribosomal Protein N-Acetylase-Like Protein; Acetyl Transferase; Ribosomal Protein N-Acetylase; Acetyltransferase GNAT Family Protein; GNAT Family xin-Antitoxin System Toxin Component; Ribosomal-Protein-Serine Acetyltransferase; Ribosomal-Protein-Alanine Acetyltransferase; Acyl-CoA Acyltransferase Domain-Containing Protein; N-Acetyltransferase; Ypothetical Protein SMU.
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MYQGTPMLNVTAPQLSGELVVLEPLSLNHVPALQLAAADGKLWELWFTSVPDPDGVKAYVEKALAQQAQGSAIPFAVRAR HSGEVVGCTRICNRVLEHRRAEIGYTWYGKSVQRSGINTETKLLLLDYCFSELDCIAVEFRTHWHNQASREAIARLGARQ DGVLRNHQILKDGTLRDTVVFSLLDSEWPAARKHLRFRLARHASEL
Sequences:
>Translated_206_residues MYQGTPMLNVTAPQLSGELVVLEPLSLNHVPALQLAAADGKLWELWFTSVPDPDGVKAYVEKALAQQAQGSAIPFAVRAR HSGEVVGCTRICNRVLEHRRAEIGYTWYGKSVQRSGINTETKLLLLDYCFSELDCIAVEFRTHWHNQASREAIARLGARQ DGVLRNHQILKDGTLRDTVVFSLLDSEWPAARKHLRFRLARHASEL >Mature_206_residues MYQGTPMLNVTAPQLSGELVVLEPLSLNHVPALQLAAADGKLWELWFTSVPDPDGVKAYVEKALAQQAQGSAIPFAVRAR HSGEVVGCTRICNRVLEHRRAEIGYTWYGKSVQRSGINTETKLLLLDYCFSELDCIAVEFRTHWHNQASREAIARLGARQ DGVLRNHQILKDGTLRDTVVFSLLDSEWPAARKHLRFRLARHASEL
Specific function: Unknown
COG id: COG1670
COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6322233, Length=182, Percent_Identity=28.021978021978, Blast_Score=69, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23112; Mature: 23112
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYQGTPMLNVTAPQLSGELVVLEPLSLNHVPALQLAAADGKLWELWFTSVPDPDGVKAYV CCCCCCEEEEECCCCCCCEEEECCCCCCCCCCEEEEECCCCEEEEEECCCCCCCHHHHHH EKALAQQAQGSAIPFAVRARHSGEVVGCTRICNRVLEHRRAEIGYTWYGKSVQRSGINTE HHHHHHHHCCCCCCEEEEECCCCCEEEHHHHHHHHHHHHHHHCCEEEECCCHHHCCCCCH TKLLLLDYCFSELDCIAVEFRTHWHNQASREAIARLGARQDGVLRNHQILKDGTLRDTVV HHHHHHHHHHCCHHEEEEEEHHHHCCHHHHHHHHHHCCCCCCCCCCCEECCCCCHHHHHH FSLLDSEWPAARKHLRFRLARHASEL HHHHCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MYQGTPMLNVTAPQLSGELVVLEPLSLNHVPALQLAAADGKLWELWFTSVPDPDGVKAYV CCCCCCEEEEECCCCCCCEEEECCCCCCCCCCEEEEECCCCEEEEEECCCCCCCHHHHHH EKALAQQAQGSAIPFAVRARHSGEVVGCTRICNRVLEHRRAEIGYTWYGKSVQRSGINTE HHHHHHHHCCCCCCEEEEECCCCCEEEHHHHHHHHHHHHHHHCCEEEECCCHHHCCCCCH TKLLLLDYCFSELDCIAVEFRTHWHNQASREAIARLGARQDGVLRNHQILKDGTLRDTVV HHHHHHHHHHCCHHEEEEEEHHHHCCHHHHHHHHHHCCCCCCCCCCCEECCCCCHHHHHH FSLLDSEWPAARKHLRFRLARHASEL HHHHCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA