| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is pnuC [C]
Identifier: 119774590
GI number: 119774590
Start: 1763893
End: 1764540
Strand: Direct
Name: pnuC [C]
Synonym: Sama_1453
Alternate gene names: 119774590
Gene position: 1763893-1764540 (Clockwise)
Preceding gene: 119774589
Following gene: 119774591
Centisome position: 40.96
GC content: 55.09
Gene sequence:
>648_bases ATGCAGGCGGATTTTTGGGGCTGGCTTGGCGGCGCCTTTCACAGTGCCTTTGGTGAAATGCAGGTGCTGTCGGCCTGGGA AGGGGTTGCCGTGATACTGGCCATGGCCTACTTACTGCTGGCCATGAAACGAAGCCGCTGGTGCTGGGTGGCGGCCTTTG CCAGCACCGCCATTTACACTGTGCTTTTTTATGAAGTCGCGCTGCTGATGGAGTCGGCGCTGAATGTGTACTACATGGGC ATGGCCATTTACGGCTATTGGCTGTGGCGTCAGGATGGCCAGGATGAACTTAAAGTGCAGCGCTGGCCGCTTAAACTGCA TCTGGGCATCATTACGCTGACCTCTATCGCATCCCTTGCTGTGGGGCATTTGATGGCCACCTTTACTGAGGCCTCTTTCC CGTATCTCGATGCGGCAACCACCTGCTTTGCGGTGATGACCACTTTCCTGGTGGCTAAAAAGGTGTTGGAGAACTGGCTG TATTGGGTGGTGATAGATGTGGTGTCCATCTACCTCTACCTCAGTAAGGGATTGATGATGACATCCCTGCTGTTTGTGTT TTACGTGGGGCTGGCGGTGGCTGGTTATTTTGTATGGCGTGCTGCTGCGGCCGAGCAGCGTCCCCCTGAGCTGGCGCTTA ATTCATGA
Upstream 100 bases:
>100_bases GGCCACCGAAATGCAGGCGGCACACGAAAAATTCGGCAAGGCTGTGTTTGTCTGCAAGTTTATCGGCGGCGAACTTAACC TGTCCCACTCGGAGTAACCC
Downstream 100 bases:
>100_bases CAATCCCTCTGGAGATTGAGTCAAGGGAGGGATCCGGGATTAAATCGCTTCCGGGTGTTACCGAAGAGGTGCTGGCATTT ATCGCCGATACGGGGCTTTT
Product: transporter
Products: nicotinamide nucleotide [Cytoplasm] [C]
Alternate protein names: Nicotinamide Mononucleotide Transporter; Nicotinamide Mononucleotide Transporter Pnuc; Nucleoside/Purine/Pyrimidine Transporter PnuC; Nicotinamide Mononucleotide Transporter PnuC Subfamily; Nicotinamide Mononucleotide Transporter Family Protein; Transporter Protein; PnuC Family Transporter; PnuC Protein; Response Regulator Receiver Domain Protein; Nicotinamide Mononucleotide Transporter Protein PnuC; Protein PnuC; Membrane Transporter; Response Regulator Receiver Domain-Containing Protein; Nicotinamide Ribonucleoside Transporter PnuC; Nicotinamide Mononucleotide Transporter Protein; Transmembrane Protein; Conserved Transporter; Transporter Of Nicotinamide Mononucleotide PnuC; Nucleoside/Purine/Pyrimidine Transport Protein PnuC; Ribosyl Nicotinamide Transporter PnuC-Like Protein; Intergral Membrane NMN Transport Protein PnuC
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MQADFWGWLGGAFHSAFGEMQVLSAWEGVAVILAMAYLLLAMKRSRWCWVAAFASTAIYTVLFYEVALLMESALNVYYMG MAIYGYWLWRQDGQDELKVQRWPLKLHLGIITLTSIASLAVGHLMATFTEASFPYLDAATTCFAVMTTFLVAKKVLENWL YWVVIDVVSIYLYLSKGLMMTSLLFVFYVGLAVAGYFVWRAAAAEQRPPELALNS
Sequences:
>Translated_215_residues MQADFWGWLGGAFHSAFGEMQVLSAWEGVAVILAMAYLLLAMKRSRWCWVAAFASTAIYTVLFYEVALLMESALNVYYMG MAIYGYWLWRQDGQDELKVQRWPLKLHLGIITLTSIASLAVGHLMATFTEASFPYLDAATTCFAVMTTFLVAKKVLENWL YWVVIDVVSIYLYLSKGLMMTSLLFVFYVGLAVAGYFVWRAAAAEQRPPELALNS >Mature_215_residues MQADFWGWLGGAFHSAFGEMQVLSAWEGVAVILAMAYLLLAMKRSRWCWVAAFASTAIYTVLFYEVALLMESALNVYYMG MAIYGYWLWRQDGQDELKVQRWPLKLHLGIITLTSIASLAVGHLMATFTEASFPYLDAATTCFAVMTTFLVAKKVLENWL YWVVIDVVSIYLYLSKGLMMTSLLFVFYVGLAVAGYFVWRAAAAEQRPPELALNS
Specific function: Required For Nmn Transport Across The Cytoplasmic Membrane. [C]
COG id: COG3201
COG function: function code H; Nicotinamide mononucleotide transporter
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24272; Mature: 24272
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQADFWGWLGGAFHSAFGEMQVLSAWEGVAVILAMAYLLLAMKRSRWCWVAAFASTAIYT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH VLFYEVALLMESALNVYYMGMAIYGYWLWRQDGQDELKVQRWPLKLHLGIITLTSIASLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHH VGHLMATFTEASFPYLDAATTCFAVMTTFLVAKKVLENWLYWVVIDVVSIYLYLSKGLMM HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TSLLFVFYVGLAVAGYFVWRAAAAEQRPPELALNS HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MQADFWGWLGGAFHSAFGEMQVLSAWEGVAVILAMAYLLLAMKRSRWCWVAAFASTAIYT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH VLFYEVALLMESALNVYYMGMAIYGYWLWRQDGQDELKVQRWPLKLHLGIITLTSIASLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHH VGHLMATFTEASFPYLDAATTCFAVMTTFLVAKKVLENWLYWVVIDVVSIYLYLSKGLMM HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TSLLFVFYVGLAVAGYFVWRAAAAEQRPPELALNS HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: nicotinamide nucleotide [Periplasm] [C]
Specific reaction: nicotinamide nucleotide [Periplasm] = nicotinamide nucleotide [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA