The gene/protein map for NC_008700 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

Click here to switch to the map view.

The map label for this gene is 119774589

Identifier: 119774589

GI number: 119774589

Start: 1763626

End: 1763889

Strand: Direct

Name: 119774589

Synonym: Sama_1452

Alternate gene names: NA

Gene position: 1763626-1763889 (Clockwise)

Preceding gene: 119774588

Following gene: 119774590

Centisome position: 40.96

GC content: 53.03

Gene sequence:

>264_bases
ATGATGAAACTCACCGCTGAAATCAGCATGTATCCGCTGCATGATAACTACCTCGAGCCTATTCGCTGGTTTATCAGCAG
GCTCGACAGCTATCCGCAAATCGTCCGTCGCACCAACGCCATGGCAACTCAGGTACAGGGCGACTATGCAGAGCTGATGG
CGATGCTGGCCACCGAAATGCAGGCGGCACACGAAAAATTCGGCAAGGCTGTGTTTGTCTGCAAGTTTATCGGCGGCGAA
CTTAACCTGTCCCACTCGGAGTAA

Upstream 100 bases:

>100_bases
CGCGCCTTTGGCCTGACCCTGGATGTGCGTTTTCTGTAATTGACATGATTGGCGCCGGGCGTGCGTGCAAGCGCGCCCGC
GACGCTTGATGAGGAACCTA

Downstream 100 bases:

>100_bases
CCCATGCAGGCGGATTTTTGGGGCTGGCTTGGCGGCGCCTTTCACAGTGCCTTTGGTGAAATGCAGGTGCTGTCGGCCTG
GGAAGGGGTTGCCGTGATAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 87; Mature: 87

Protein sequence:

>87_residues
MMKLTAEISMYPLHDNYLEPIRWFISRLDSYPQIVRRTNAMATQVQGDYAELMAMLATEMQAAHEKFGKAVFVCKFIGGE
LNLSHSE

Sequences:

>Translated_87_residues
MMKLTAEISMYPLHDNYLEPIRWFISRLDSYPQIVRRTNAMATQVQGDYAELMAMLATEMQAAHEKFGKAVFVCKFIGGE
LNLSHSE
>Mature_87_residues
MMKLTAEISMYPLHDNYLEPIRWFISRLDSYPQIVRRTNAMATQVQGDYAELMAMLATEMQAAHEKFGKAVFVCKFIGGE
LNLSHSE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9987; Mature: 9987

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
8.0 %Met     (Translated Protein)
9.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
8.0 %Met     (Mature Protein)
9.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKLTAEISMYPLHDNYLEPIRWFISRLDSYPQIVRRTNAMATQVQGDYAELMAMLATEM
CCEEECCEEEECCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
QAAHEKFGKAVFVCKFIGGELNLSHSE
HHHHHHHCCHHHHEEECCCCCCCCCCC
>Mature Secondary Structure
MMKLTAEISMYPLHDNYLEPIRWFISRLDSYPQIVRRTNAMATQVQGDYAELMAMLATEM
CCEEECCEEEECCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
QAAHEKFGKAVFVCKFIGGELNLSHSE
HHHHHHHCCHHHHEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA