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The map label for this gene is viuA [H]

Identifier: 119774588

GI number: 119774588

Start: 1761372

End: 1763564

Strand: Direct

Name: viuA [H]

Synonym: Sama_1451

Alternate gene names: 119774588

Gene position: 1761372-1763564 (Clockwise)

Preceding gene: 119774587

Following gene: 119774589

Centisome position: 40.9

GC content: 54.13

Gene sequence:

>2193_bases
ATGTTTACTAAATCCCGTATTCCCCTGTTTGCCCTGGCACCCGTGTCTTTGGCCGTATGTTCGTCGCTGGCCTTTGCCGC
TGACAACAAGGCTACTGCTGAAGAAAACCCCATGGAAGTAATGCTGGTGACGGCCGATTTTCGGGGGCTCTCGGTTGAAA
AAATTCCCTCCAGCGTTACCGTGATTGATGCCCAGAAGATAGAAGACGAAGGCGCCCGGCACTTTGAAGATATTTTGGGT
TCTGTGGCCAATTTCAACTGGTCCGGTGGTACCTCCAGGCCCCGATATTTCCAGATCCGTGGGGTAGGCGAGCAGGAGGA
CTACAAGGGCGCGCCCAATTCCTCCGTTGGCTATTTGATTGACGATATCGACCTGTCAGGGCTGGGCATGGTGTCCAGCA
TGTACGATCTGCAGCAAGTGGAAGTGCTGCGTGGTCCTCAGGGTACCCGCTACGGCGCCAACGCGCTGGCAGGCCTGATT
TATCTTAAGAGCAACGACCCCACTGAGCAGTTTGAACACGGTGCCCGGCTGAGTCTTGGCAATGATAATCTTAAAACCTT
CGCCGGTTTCAGCTCAGGTCCCATGATGGAGTCTGGGGAACTGCTGTACCGTGTTGCCATTGAGCAGCACCGTCAGGACG
GTTTTCGTGACAACCTGTACCTTGACCGTTCAGACACCAACAAGCGTGATGAACTGAGTTTCAGAACCAAGGTGCGCTGG
TATGCCAACGACCATACCCAGGTAGACTTCACCCTGATGCACGCAGACTTTGACAATGGTTACGATGCCTGGACTCTGGA
TAACAATGGCTTTGATACCCTGACCGACATGCCGGGCACTGATGCCCAGCGCACCACGGGTGTGGGATTGAAGCTGTTGT
ACGATGGCTTCGATAAGGCCGAGTTGACCTCACTGACCAGCTTTGCCGGGACTGACCATCATCACGGTTACGATGGCGAC
TGGGCTAACCCCGAATATTGGGCCGCACGCCAGTGCACCGATGATTATGATGTCAACGGTAATGGCGACTATGCTGACCT
TTTACCCTGCGAATACGATTACACCTGGGACAAGCGTGGCGATCGCAGCACCGTATCCCAGGAGTTCCGTTTGGCCAGCA
ACGAGGCGGGCAAGATTTGGGGTGGCAGCACCGCCTGGCTCGTTGGCCTGTATGGTATGCAGCTTAAAGAAGACAACGAC
CTGGCTTCTTTTTACAACGGTTGGCCAGATGAAACACTACGCTCCAGCTACGAAGCGACCAACCTCGCCATCTTCGGTCA
GCTCGACAGCGACCTGGGGCAGGAGATAAACCTGTCGGTGGGCCTGCGTCTTGAGCGTCGTGATGCCGATTACAGCGATG
ATGCAGGGGATGCCTTTGACCCATCTGAAACCATGTGGGGGGGCCATATTGCCATCGGCAAACAGCTGAATGAGCAGCAT
AATCTCTATGGCCGCATTGCCCGCGGTTACAAAGCGGGCGGTTTTAACATGTCGCTGCCTGCTGAGTTTGCCGATAAGAA
GGAGTTCGATACTGAAGTCCTCTACAACTACGAAATTGGCCTTAAGTCCAGCTTCCTTGAAGGCAACTTCGACACCAATC
TGGCGCTGTTCTTTATGGACAGACAAGATCAGCAGGTATCGGCATCCCAACAGGATCCTGCCAAACCCCAGCGTTTCGTT
CTTTTTACCGAAAATGCCGGCAGTTCAACCAATTACGGTGCCGAGCTTGATCTGAACTGGTACGCCACCGATAACCTGCA
CTTCTACGGCAGCCTGGGCTATCTCAAGGCCGAGTACGGTGACTACAGCTATCAGGATAAATATGGCGGCCTGGTTGACC
TCTCTGGCCGTGAGCTGGCCCATGCACCCAATTGGACCTGGTCACTGGGCACCACCTGGCGTGCCGACTCAGGCTTTTTT
GTCAACCTCAATGCCAATGGCAAGAGCAAGTTCTACTATTCAGACTCCAATGACTCAGTTTCCAAAGACTATGGGGTGCT
CAATGCCCGAGCGGGCTTCGAGGGCGATATCTGGTCTGTCTATGTTTGGGGCCGCAATCTGCTGGATGAAGAATACGGTG
TGCGGGGCTTTTATTTCGGCAATGAGCCGGACAATGGCTGGGCGGACAAGCAATATATTCGCTTTGGCGATCCCCGCGCC
TTTGGCCTGACCCTGGATGTGCGTTTTCTGTAA

Upstream 100 bases:

>100_bases
AACCTGATCCGGCTGATACCGGCGTAGGAATGGGCTGATACTGCAAATTTATTGCCACTCCGAGCTTGCCGGATCTCATA
CAAATTTTGTTGAGGTCCAA

Downstream 100 bases:

>100_bases
TTGACATGATTGGCGCCGGGCGTGCGTGCAAGCGCGCCCGCGACGCTTGATGAGGAACCTAATGATGAAACTCACCGCTG
AAATCAGCATGTATCCGCTG

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 730; Mature: 730

Protein sequence:

>730_residues
MFTKSRIPLFALAPVSLAVCSSLAFAADNKATAEENPMEVMLVTADFRGLSVEKIPSSVTVIDAQKIEDEGARHFEDILG
SVANFNWSGGTSRPRYFQIRGVGEQEDYKGAPNSSVGYLIDDIDLSGLGMVSSMYDLQQVEVLRGPQGTRYGANALAGLI
YLKSNDPTEQFEHGARLSLGNDNLKTFAGFSSGPMMESGELLYRVAIEQHRQDGFRDNLYLDRSDTNKRDELSFRTKVRW
YANDHTQVDFTLMHADFDNGYDAWTLDNNGFDTLTDMPGTDAQRTTGVGLKLLYDGFDKAELTSLTSFAGTDHHHGYDGD
WANPEYWAARQCTDDYDVNGNGDYADLLPCEYDYTWDKRGDRSTVSQEFRLASNEAGKIWGGSTAWLVGLYGMQLKEDND
LASFYNGWPDETLRSSYEATNLAIFGQLDSDLGQEINLSVGLRLERRDADYSDDAGDAFDPSETMWGGHIAIGKQLNEQH
NLYGRIARGYKAGGFNMSLPAEFADKKEFDTEVLYNYEIGLKSSFLEGNFDTNLALFFMDRQDQQVSASQQDPAKPQRFV
LFTENAGSSTNYGAELDLNWYATDNLHFYGSLGYLKAEYGDYSYQDKYGGLVDLSGRELAHAPNWTWSLGTTWRADSGFF
VNLNANGKSKFYYSDSNDSVSKDYGVLNARAGFEGDIWSVYVWGRNLLDEEYGVRGFYFGNEPDNGWADKQYIRFGDPRA
FGLTLDVRFL

Sequences:

>Translated_730_residues
MFTKSRIPLFALAPVSLAVCSSLAFAADNKATAEENPMEVMLVTADFRGLSVEKIPSSVTVIDAQKIEDEGARHFEDILG
SVANFNWSGGTSRPRYFQIRGVGEQEDYKGAPNSSVGYLIDDIDLSGLGMVSSMYDLQQVEVLRGPQGTRYGANALAGLI
YLKSNDPTEQFEHGARLSLGNDNLKTFAGFSSGPMMESGELLYRVAIEQHRQDGFRDNLYLDRSDTNKRDELSFRTKVRW
YANDHTQVDFTLMHADFDNGYDAWTLDNNGFDTLTDMPGTDAQRTTGVGLKLLYDGFDKAELTSLTSFAGTDHHHGYDGD
WANPEYWAARQCTDDYDVNGNGDYADLLPCEYDYTWDKRGDRSTVSQEFRLASNEAGKIWGGSTAWLVGLYGMQLKEDND
LASFYNGWPDETLRSSYEATNLAIFGQLDSDLGQEINLSVGLRLERRDADYSDDAGDAFDPSETMWGGHIAIGKQLNEQH
NLYGRIARGYKAGGFNMSLPAEFADKKEFDTEVLYNYEIGLKSSFLEGNFDTNLALFFMDRQDQQVSASQQDPAKPQRFV
LFTENAGSSTNYGAELDLNWYATDNLHFYGSLGYLKAEYGDYSYQDKYGGLVDLSGRELAHAPNWTWSLGTTWRADSGFF
VNLNANGKSKFYYSDSNDSVSKDYGVLNARAGFEGDIWSVYVWGRNLLDEEYGVRGFYFGNEPDNGWADKQYIRFGDPRA
FGLTLDVRFL
>Mature_730_residues
MFTKSRIPLFALAPVSLAVCSSLAFAADNKATAEENPMEVMLVTADFRGLSVEKIPSSVTVIDAQKIEDEGARHFEDILG
SVANFNWSGGTSRPRYFQIRGVGEQEDYKGAPNSSVGYLIDDIDLSGLGMVSSMYDLQQVEVLRGPQGTRYGANALAGLI
YLKSNDPTEQFEHGARLSLGNDNLKTFAGFSSGPMMESGELLYRVAIEQHRQDGFRDNLYLDRSDTNKRDELSFRTKVRW
YANDHTQVDFTLMHADFDNGYDAWTLDNNGFDTLTDMPGTDAQRTTGVGLKLLYDGFDKAELTSLTSFAGTDHHHGYDGD
WANPEYWAARQCTDDYDVNGNGDYADLLPCEYDYTWDKRGDRSTVSQEFRLASNEAGKIWGGSTAWLVGLYGMQLKEDND
LASFYNGWPDETLRSSYEATNLAIFGQLDSDLGQEINLSVGLRLERRDADYSDDAGDAFDPSETMWGGHIAIGKQLNEQH
NLYGRIARGYKAGGFNMSLPAEFADKKEFDTEVLYNYEIGLKSSFLEGNFDTNLALFFMDRQDQQVSASQQDPAKPQRFV
LFTENAGSSTNYGAELDLNWYATDNLHFYGSLGYLKAEYGDYSYQDKYGGLVDLSGRELAHAPNWTWSLGTTWRADSGFF
VNLNANGKSKFYYSDSNDSVSKDYGVLNARAGFEGDIWSVYVWGRNLLDEEYGVRGFYFGNEPDNGWADKQYIRFGDPRA
FGLTLDVRFL

Specific function: Receptor for ferric vibriobactin [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug [H]

EC number: NA

Molecular weight: Translated: 81788; Mature: 81788

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: PS00105 AA_TRANSFER_CLASS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTKSRIPLFALAPVSLAVCSSLAFAADNKATAEENPMEVMLVTADFRGLSVEKIPSSVT
CCCCCCCCEEEECHHHHHHHHHHHEECCCCCCCCCCCEEEEEEEECCCCCCHHHCCCEEE
VIDAQKIEDEGARHFEDILGSVANFNWSGGTSRPRYFQIRGVGEQEDYKGAPNSSVGYLI
EEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCHHCCCCCCCCCCEEE
DDIDLSGLGMVSSMYDLQQVEVLRGPQGTRYGANALAGLIYLKSNDPTEQFEHGARLSLG
ECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCHHHHHCCCEEEEC
NDNLKTFAGFSSGPMMESGELLYRVAIEQHRQDGFRDNLYLDRSDTNKRDELSFRTKVRW
CCCCEEEECCCCCCCCCCCCEEEEHHHHHHHCCCCCCCEEEECCCCCCCCCEEEEEEEEE
YANDHTQVDFTLMHADFDNGYDAWTLDNNGFDTLTDMPGTDAQRTTGVGLKLLYDGFDKA
EECCCCEEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCH
ELTSLTSFAGTDHHHGYDGDWANPEYWAARQCTDDYDVNGNGDYADLLPCEYDYTWDKRG
HHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DRSTVSQEFRLASNEAGKIWGGSTAWLVGLYGMQLKEDNDLASFYNGWPDETLRSSYEAT
CHHHHHHHHHCCCCCCCEEECCCCEEEEEEECCEEECCCCHHHHHCCCCCHHHHHCCCCC
NLAIFGQLDSDLGQEINLSVGLRLERRDADYSDDAGDAFDPSETMWGGHIAIGKQLNEQH
EEEEEECCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHH
NLYGRIARGYKAGGFNMSLPAEFADKKEFDTEVLYNYEIGLKSSFLEGNFDTNLALFFMD
HHHHHHHCCEECCCCCCCCCHHHCCCCCCCCEEEEEEEECCCCEEECCCCCCCEEEEEEC
RQDQQVSASQQDPAKPQRFVLFTENAGSSTNYGAELDLNWYATDNLHFYGSLGYLKAEYG
CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEEEECCEEEEEECCEEEEECC
DYSYQDKYGGLVDLSGRELAHAPNWTWSLGTTWRADSGFFVNLNANGKSKFYYSDSNDSV
CCCCCCCCCCEEEECCCCCCCCCCCEEECCCEEECCCCEEEEEECCCCEEEEECCCCCCC
SKDYGVLNARAGFEGDIWSVYVWGRNLLDEEYGVRGFYFGNEPDNGWADKQYIRFGDPRA
CCCCCEEEECCCCCCCEEEEEEECCHHCCHHCCCEEEECCCCCCCCCCCCCEEEECCCEE
FGLTLDVRFL
EEEEEEEEEC
>Mature Secondary Structure
MFTKSRIPLFALAPVSLAVCSSLAFAADNKATAEENPMEVMLVTADFRGLSVEKIPSSVT
CCCCCCCCEEEECHHHHHHHHHHHEECCCCCCCCCCCEEEEEEEECCCCCCHHHCCCEEE
VIDAQKIEDEGARHFEDILGSVANFNWSGGTSRPRYFQIRGVGEQEDYKGAPNSSVGYLI
EEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCHHCCCCCCCCCCEEE
DDIDLSGLGMVSSMYDLQQVEVLRGPQGTRYGANALAGLIYLKSNDPTEQFEHGARLSLG
ECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCHHHHHCCCEEEEC
NDNLKTFAGFSSGPMMESGELLYRVAIEQHRQDGFRDNLYLDRSDTNKRDELSFRTKVRW
CCCCEEEECCCCCCCCCCCCEEEEHHHHHHHCCCCCCCEEEECCCCCCCCCEEEEEEEEE
YANDHTQVDFTLMHADFDNGYDAWTLDNNGFDTLTDMPGTDAQRTTGVGLKLLYDGFDKA
EECCCCEEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCH
ELTSLTSFAGTDHHHGYDGDWANPEYWAARQCTDDYDVNGNGDYADLLPCEYDYTWDKRG
HHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DRSTVSQEFRLASNEAGKIWGGSTAWLVGLYGMQLKEDNDLASFYNGWPDETLRSSYEAT
CHHHHHHHHHCCCCCCCEEECCCCEEEEEEECCEEECCCCHHHHHCCCCCHHHHHCCCCC
NLAIFGQLDSDLGQEINLSVGLRLERRDADYSDDAGDAFDPSETMWGGHIAIGKQLNEQH
EEEEEECCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHH
NLYGRIARGYKAGGFNMSLPAEFADKKEFDTEVLYNYEIGLKSSFLEGNFDTNLALFFMD
HHHHHHHCCEECCCCCCCCCHHHCCCCCCCCEEEEEEEECCCCEEECCCCCCCEEEEEEC
RQDQQVSASQQDPAKPQRFVLFTENAGSSTNYGAELDLNWYATDNLHFYGSLGYLKAEYG
CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEEEECCEEEEEECCEEEEECC
DYSYQDKYGGLVDLSGRELAHAPNWTWSLGTTWRADSGFFVNLNANGKSKFYYSDSNDSV
CCCCCCCCCCEEEECCCCCCCCCCCEEECCCEEECCCCEEEEEECCCCEEEEECCCCCCC
SKDYGVLNARAGFEGDIWSVYVWGRNLLDEEYGVRGFYFGNEPDNGWADKQYIRFGDPRA
CCCCCEEEECCCCCCCEEEEEEECCHHCCHHCCCEEEECCCCCCCCCCCCCEEEECCCEE
FGLTLDVRFL
EEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1317381 [H]