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The map label for this gene is yfdV [C]

Identifier: 119774568

GI number: 119774568

Start: 1742800

End: 1743717

Strand: Direct

Name: yfdV [C]

Synonym: Sama_1431

Alternate gene names: 119774568

Gene position: 1742800-1743717 (Clockwise)

Preceding gene: 119774567

Following gene: 119774569

Centisome position: 40.47

GC content: 55.66

Gene sequence:

>918_bases
ATGTCCGTAATCGAAATCGTCTTCCCGCTGCTGTTTATCGCCGCGCTGGGCTATGGTGCCTGCCGCAGTGGCTGGTTTAG
CCGCGAGCATATCGCCGGCATAAGCAAGTTCGCCTTTTATGTGTGTATTCCCGCACTGCTGTTTTCCGCCATGCTGAAAG
TACCACTTAAAGAGAGTATCCGCTTACCGGTGCTGGCGGCCTTTTATATTCCAGTGGTGCTGAGCTTCGCCTTTACCTTG
TTGCTGGCCCACCAAACCCTTAAACGCCCATACCGAGACTGCGCCGTGCTTGCCCTCGGCGGCAGCTACTCCAACACCTT
GCTGGTGGGCTTGCCGGTGATCATGGCTGCCTTCGGCCCTGCGCAGATGGCAAGCGTGTTTTTAATTATTCCCTTTCACA
GTGCGGTGTTGTTTGGGCTCACTTTTGCGCTGTCTGATAATACGGAAGCCGAGGGTGGCAGCAGGGGCACACAGCTTATC
AAGGGGCTGCTGTTTAACCCTGTGGTGGCGAGTATCGGCCTTGGGCTTATCGGTAACGTCGCCGGGCTGAGCCTGCCGAC
AGCCCTTGGCACCAGCCTCGAAATGCTCGCCAAACCAGCCATTGCCTGTGCGCTCTTTGTGCTGGGTGCCAATTTGAATC
AATATCGCCTCTCCAGTGCCTTTGCTCTGACGGCGGTGTTAAGTGCGATTAAGCTTATGCTGCTGCCCCTGCTTATCCTG
ATTGCGGGTAAGCTGCTTGGGCTTACCTCACTGGAGCTTGCGGTAACAGTACTGCTTGGCGCATCGCCACTTGGGGTGAA
CGCCTACCTGATTGCGGCGCAGCTTAAGCGCGACAGCGACATCATTGCTGGCGCCGTGGTGCTGTCATCCATGCTTTGTA
TCCTCTCTGTGATCTTCTGGTTAACTGTGTTAACGTGA

Upstream 100 bases:

>100_bases
GGTAGAAAAAGGGCGCCTTCGGGCGCCCTTTTTTTGTGTGTATAGATGTATGTATAGAAGTAGGTATAGATATGTGTATT
GACTCATTGATAGGCGTGGC

Downstream 100 bases:

>100_bases
GGCCTCTTTTTGGGTTGAGGACTTTACTTTGTCTTTGGTTGAGGACTCTTTTTGGGTCGAGGACTCTTTTTGAGTTGAAG
ACTCTTTTGGGGGAGCTCTG

Product: auxin efflux carrier

Products: NA

Alternate protein names: Auxin Efflux Carrier Family Protein; Permease; Malonate Transporter; Membrane Transport Family; AEC Family Transporter; MdcF Malonate Transporter; Transporter AEC Family; Membrane Transport Family Protein; Malonate Transporter AEC Family; Transmembrane Permease Protein; Malonate Transporter MdcF AEC Family Protein

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MSVIEIVFPLLFIAALGYGACRSGWFSREHIAGISKFAFYVCIPALLFSAMLKVPLKESIRLPVLAAFYIPVVLSFAFTL
LLAHQTLKRPYRDCAVLALGGSYSNTLLVGLPVIMAAFGPAQMASVFLIIPFHSAVLFGLTFALSDNTEAEGGSRGTQLI
KGLLFNPVVASIGLGLIGNVAGLSLPTALGTSLEMLAKPAIACALFVLGANLNQYRLSSAFALTAVLSAIKLMLLPLLIL
IAGKLLGLTSLELAVTVLLGASPLGVNAYLIAAQLKRDSDIIAGAVVLSSMLCILSVIFWLTVLT

Sequences:

>Translated_305_residues
MSVIEIVFPLLFIAALGYGACRSGWFSREHIAGISKFAFYVCIPALLFSAMLKVPLKESIRLPVLAAFYIPVVLSFAFTL
LLAHQTLKRPYRDCAVLALGGSYSNTLLVGLPVIMAAFGPAQMASVFLIIPFHSAVLFGLTFALSDNTEAEGGSRGTQLI
KGLLFNPVVASIGLGLIGNVAGLSLPTALGTSLEMLAKPAIACALFVLGANLNQYRLSSAFALTAVLSAIKLMLLPLLIL
IAGKLLGLTSLELAVTVLLGASPLGVNAYLIAAQLKRDSDIIAGAVVLSSMLCILSVIFWLTVLT
>Mature_304_residues
SVIEIVFPLLFIAALGYGACRSGWFSREHIAGISKFAFYVCIPALLFSAMLKVPLKESIRLPVLAAFYIPVVLSFAFTLL
LAHQTLKRPYRDCAVLALGGSYSNTLLVGLPVIMAAFGPAQMASVFLIIPFHSAVLFGLTFALSDNTEAEGGSRGTQLIK
GLLFNPVVASIGLGLIGNVAGLSLPTALGTSLEMLAKPAIACALFVLGANLNQYRLSSAFALTAVLSAIKLMLLPLLILI
AGKLLGLTSLELAVTVLLGASPLGVNAYLIAAQLKRDSDIIAGAVVLSSMLCILSVIFWLTVLT

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Integral membrane protein (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32069; Mature: 31938

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVIEIVFPLLFIAALGYGACRSGWFSREHIAGISKFAFYVCIPALLFSAMLKVPLKESI
CHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCC
RLPVLAAFYIPVVLSFAFTLLLAHQTLKRPYRDCAVLALGGSYSNTLLVGLPVIMAAFGP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHEEEEECCCCCCHHHHHHHHHHHHCCH
AQMASVFLIIPFHSAVLFGLTFALSDNTEAEGGSRGTQLIKGLLFNPVVASIGLGLIGNV
HHHHHEEEEHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AGLSLPTALGTSLEMLAKPAIACALFVLGANLNQYRLSSAFALTAVLSAIKLMLLPLLIL
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAGKLLGLTSLELAVTVLLGASPLGVNAYLIAAQLKRDSDIIAGAVVLSSMLCILSVIFW
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LTVLT
HHHCC
>Mature Secondary Structure 
SVIEIVFPLLFIAALGYGACRSGWFSREHIAGISKFAFYVCIPALLFSAMLKVPLKESI
HHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCC
RLPVLAAFYIPVVLSFAFTLLLAHQTLKRPYRDCAVLALGGSYSNTLLVGLPVIMAAFGP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHEEEEECCCCCCHHHHHHHHHHHHCCH
AQMASVFLIIPFHSAVLFGLTFALSDNTEAEGGSRGTQLIKGLLFNPVVASIGLGLIGNV
HHHHHEEEEHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AGLSLPTALGTSLEMLAKPAIACALFVLGANLNQYRLSSAFALTAVLSAIKLMLLPLLIL
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAGKLLGLTSLELAVTVLLGASPLGVNAYLIAAQLKRDSDIIAGAVVLSSMLCILSVIFW
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LTVLT
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA