Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
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Accession | NC_008700 |
Length | 4,306,142 |
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The map label for this gene is yoaA [H]
Identifier: 119774569
GI number: 119774569
Start: 1743844
End: 1744347
Strand: Direct
Name: yoaA [H]
Synonym: Sama_1432
Alternate gene names: 119774569
Gene position: 1743844-1744347 (Clockwise)
Preceding gene: 119774568
Following gene: 119774570
Centisome position: 40.5
GC content: 49.01
Gene sequence:
>504_bases ATGATAATTACAACAACAGACAGATTGATTTTACGGCATTTCAACGAAGGCGATATAGAAGCGCTGTTTTTAATGAACAG TATCCCGGAAATATTGACCTATATCCCCATCGAACCTTTTACGGACATGGCCCAGGCCGAGAAATTGCTCCATGAGGTGA TTTTCGAAGACTATCGCAGCCGCGGTTTCGGTCGCTGGGCGGTCGAGCATAAGGCCAGTGGCAAGGTGATTGGTTTTTGT GGTCCCAAGTTTATTCCTGAGTACGACAAAGTAGAGCTGGGTTACCGTTACCTGCCCGAATATTGGGGGCAGGGGATTGG CAGTGAGGCAGCATCAGCCGCCATTGCCGAATTCAAACCCAGGCTTGGCATAGACGAAGCTATAGCGCTCATTCTTGATG GTAATTTCGGTTCCATGGGCGTTGCCAGGCACATCGGCATGGAGCCGCAGCAGCGTGATAAATTTATGGAGCATGATGTG ACTGTGTTCCATAAGTGGCTGTAA
Upstream 100 bases:
>100_bases CTTTGTCTTTGGTTGAGGACTCTTTTTGGGTCGAGGACTCTTTTTGAGTTGAAGACTCTTTTGGGGGAGCTCTGAGAAGG GCAGTGCAGGAGCGCATTTT
Downstream 100 bases:
>100_bases TTACACCCCGACAGCCGCAAATTCCGTCTTCATCGCTGGCATTTGGCGATAAGGCGGGGTAGAGTCTCCTTTGGTGACTC TGGTCAGACTCTTAAGCAAG
Product: GCN5-related N-acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MIITTTDRLILRHFNEGDIEALFLMNSIPEILTYIPIEPFTDMAQAEKLLHEVIFEDYRSRGFGRWAVEHKASGKVIGFC GPKFIPEYDKVELGYRYLPEYWGQGIGSEAASAAIAEFKPRLGIDEAIALILDGNFGSMGVARHIGMEPQQRDKFMEHDV TVFHKWL
Sequences:
>Translated_167_residues MIITTTDRLILRHFNEGDIEALFLMNSIPEILTYIPIEPFTDMAQAEKLLHEVIFEDYRSRGFGRWAVEHKASGKVIGFC GPKFIPEYDKVELGYRYLPEYWGQGIGSEAASAAIAEFKPRLGIDEAIALILDGNFGSMGVARHIGMEPQQRDKFMEHDV TVFHKWL >Mature_167_residues MIITTTDRLILRHFNEGDIEALFLMNSIPEILTYIPIEPFTDMAQAEKLLHEVIFEDYRSRGFGRWAVEHKASGKVIGFC GPKFIPEYDKVELGYRYLPEYWGQGIGSEAASAAIAEFKPRLGIDEAIALILDGNFGSMGVARHIGMEPQQRDKFMEHDV TVFHKWL
Specific function: Unknown
COG id: COG1670
COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: NA
Molecular weight: Translated: 19050; Mature: 19050
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIITTTDRLILRHFNEGDIEALFLMNSIPEILTYIPIEPFTDMAQAEKLLHEVIFEDYRS CEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH RGFGRWAVEHKASGKVIGFCGPKFIPEYDKVELGYRYLPEYWGQGIGSEAASAAIAEFKP CCCCCEEEEECCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC RLGIDEAIALILDGNFGSMGVARHIGMEPQQRDKFMEHDVTVFHKWL CCCCCHHEEEEECCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIITTTDRLILRHFNEGDIEALFLMNSIPEILTYIPIEPFTDMAQAEKLLHEVIFEDYRS CEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH RGFGRWAVEHKASGKVIGFCGPKFIPEYDKVELGYRYLPEYWGQGIGSEAASAAIAEFKP CCCCCEEEEECCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC RLGIDEAIALILDGNFGSMGVARHIGMEPQQRDKFMEHDVTVFHKWL CCCCCHHEEEEECCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]