| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is mak [H]
Identifier: 119774542
GI number: 119774542
Start: 1706682
End: 1707614
Strand: Direct
Name: mak [H]
Synonym: Sama_1405
Alternate gene names: 119774542
Gene position: 1706682-1707614 (Clockwise)
Preceding gene: 119774541
Following gene: 119774543
Centisome position: 39.63
GC content: 57.88
Gene sequence:
>933_bases ATGTATCGCTCTGGGATTGATTTGGGCGGCACCAAGATTGAATTGGTGACCTTGAATGAAAAGGGGGAGGAGGTATTTCG CAAGCGTGTACCTACGCCCAAGGACTACCGTGCGACCCTCGAGGCGGTTGCTGGCCTGGTGCATGACTCTGAAAAGGAAA CCGGACAGGTGTCCAGTGTCGGGATTGGTATTCCCGGTGTGGTGTCTGCGGTCACCGGCAGGGTAAAGAACTCCAATGCC GTGTGGCTGAATGGACAGCCGATGGATAAGGATCTCGGTGCCATGCTGGGCCGGGAGGTGCGTATTGCCAACGATGCCAA TTGCTTTGCAGTGTCTGAGTCTGTGGATGGCGGCGGCGCCGGTAAAACCCTGGTATTTGGTGCCATTCTGGGCACCGGCT GCGGCGCAGGTATTGCGATTAACCACAAGGTACATGGCGGTGGTAACGGCATTGGCGGTGAATGGGGCCATAACCCGCTG CCGTGGATGACGGCAGATGAGTTTAACTCCACCCGCTGCTTCTGCGGCAACGCCGATTGCATCGAAACCTTTGTTTCGGG CACAGGCTTTGTGCGGGACTTTCGTGCCCATGGTGGCGAGGCGGCAAGCGGTATTGAAATTGTGGCGCTGATGGGCAAGG GCGAACCCTTGGCTGAAGCCGCCTTTGGCCGCTTTATCGACCGTTTGGCCAGAGCGCTGGCGCACGTTATCAATCTGCTC GACCCGGACGTGATAGTCCTTGGCGGCGGTGTGTCCAATATCGATGAGATTTACGAGTATCTGCCCGCCTTGCTGCCCAA GTACGTGTTGGGCGGCGAGTGTGCCACCAAGGTGGTGAAAAACCATCATGGAGCGTCCTCAGGGGTACGGGGTGCAGCTT GGCTGTGGGCACCCGGTGAACAGGCTGCCTTGCCTGGTCTGCAGGAATTGTAA
Upstream 100 bases:
>100_bases TGGAATGTGGATTGCCGCCGGTCAGCGACAAATGACAGCACTGAGCATGACCGCGACATGCCGCGCTGAGATGAAAAACA CCATCAACATGGAGAATGAG
Downstream 100 bases:
>100_bases TTAAGGGGGCTGTTAACTCCGAATAGGTGGGCAGTGTTGGTGCTGCCACATGAAATAGGTTTGTTGCTTATCCCTCATGG ATGAGGGCTTTTATGTGCTT
Product: fructokinase
Products: NA
Alternate protein names: D-fructose kinase; Manno(fructo)kinase [H]
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MYRSGIDLGGTKIELVTLNEKGEEVFRKRVPTPKDYRATLEAVAGLVHDSEKETGQVSSVGIGIPGVVSAVTGRVKNSNA VWLNGQPMDKDLGAMLGREVRIANDANCFAVSESVDGGGAGKTLVFGAILGTGCGAGIAINHKVHGGGNGIGGEWGHNPL PWMTADEFNSTRCFCGNADCIETFVSGTGFVRDFRAHGGEAASGIEIVALMGKGEPLAEAAFGRFIDRLARALAHVINLL DPDVIVLGGGVSNIDEIYEYLPALLPKYVLGGECATKVVKNHHGASSGVRGAAWLWAPGEQAALPGLQEL
Sequences:
>Translated_310_residues MYRSGIDLGGTKIELVTLNEKGEEVFRKRVPTPKDYRATLEAVAGLVHDSEKETGQVSSVGIGIPGVVSAVTGRVKNSNA VWLNGQPMDKDLGAMLGREVRIANDANCFAVSESVDGGGAGKTLVFGAILGTGCGAGIAINHKVHGGGNGIGGEWGHNPL PWMTADEFNSTRCFCGNADCIETFVSGTGFVRDFRAHGGEAASGIEIVALMGKGEPLAEAAFGRFIDRLARALAHVINLL DPDVIVLGGGVSNIDEIYEYLPALLPKYVLGGECATKVVKNHHGASSGVRGAAWLWAPGEQAALPGLQEL >Mature_310_residues MYRSGIDLGGTKIELVTLNEKGEEVFRKRVPTPKDYRATLEAVAGLVHDSEKETGQVSSVGIGIPGVVSAVTGRVKNSNA VWLNGQPMDKDLGAMLGREVRIANDANCFAVSESVDGGGAGKTLVFGAILGTGCGAGIAINHKVHGGGNGIGGEWGHNPL PWMTADEFNSTRCFCGNADCIETFVSGTGFVRDFRAHGGEAASGIEIVALMGKGEPLAEAAFGRFIDRLARALAHVINLL DPDVIVLGGGVSNIDEIYEYLPALLPKYVLGGECATKVVKNHHGASSGVRGAAWLWAPGEQAALPGLQEL
Specific function: Catalyzes the phosphorylation of fructose to fructose-6- P. Has also low level glucokinase activity in vitro. Is not able to phosphorylate D-ribose, D-mannitol, D-sorbitol, inositol, and L-threonine [H]
COG id: COG1940
COG function: function code KG; Transcriptional regulator/sugar kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ROK (nagC/xylR) family [H]
Homologues:
Organism=Escherichia coli, GI87081733, Length=298, Percent_Identity=58.7248322147651, Blast_Score=365, Evalue=1e-102, Organism=Escherichia coli, GI1787363, Length=300, Percent_Identity=40.3333333333333, Blast_Score=206, Evalue=1e-54, Organism=Escherichia coli, GI1790522, Length=309, Percent_Identity=27.5080906148867, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1786891, Length=274, Percent_Identity=21.8978102189781, Blast_Score=65, Evalue=4e-12,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000600 [H]
Pfam domain/function: PF00480 ROK [H]
EC number: =2.7.1.4 [H]
Molecular weight: Translated: 32319; Mature: 32319
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: PS01125 ROK
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRSGIDLGGTKIELVTLNEKGEEVFRKRVPTPKDYRATLEAVAGLVHDSEKETGQVSSV CCCCCCCCCCCEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEE GIGIPGVVSAVTGRVKNSNAVWLNGQPMDKDLGAMLGREVRIANDANCFAVSESVDGGGA CCCCHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHCCEEEEECCCCEEEEECCCCCCCC GKTLVFGAILGTGCGAGIAINHKVHGGGNGIGGEWGHNPLPWMTADEFNSTRCFCGNADC CHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHH IETFVSGTGFVRDFRAHGGEAASGIEIVALMGKGEPLAEAAFGRFIDRLARALAHVINLL HHHHHCCCCHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHC DPDVIVLGGGVSNIDEIYEYLPALLPKYVLGGECATKVVKNHHGASSGVRGAAWLWAPGE CCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCEEEEECCCC QAALPGLQEL HHHCCCHHCC >Mature Secondary Structure MYRSGIDLGGTKIELVTLNEKGEEVFRKRVPTPKDYRATLEAVAGLVHDSEKETGQVSSV CCCCCCCCCCCEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEE GIGIPGVVSAVTGRVKNSNAVWLNGQPMDKDLGAMLGREVRIANDANCFAVSESVDGGGA CCCCHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHCCEEEEECCCCEEEEECCCCCCCC GKTLVFGAILGTGCGAGIAINHKVHGGGNGIGGEWGHNPLPWMTADEFNSTRCFCGNADC CHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHH IETFVSGTGFVRDFRAHGGEAASGIEIVALMGKGEPLAEAAFGRFIDRLARALAHVINLL HHHHHCCCCHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHC DPDVIVLGGGVSNIDEIYEYLPALLPKYVLGGECATKVVKNHHGASSGVRGAAWLWAPGE CCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCEEEEECCCC QAALPGLQEL HHHCCCHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8807285; 9278503; 1744033 [H]