Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is bglX [H]

Identifier: 119774541

GI number: 119774541

Start: 1704037

End: 1706616

Strand: Direct

Name: bglX [H]

Synonym: Sama_1404

Alternate gene names: 119774541

Gene position: 1704037-1706616 (Clockwise)

Preceding gene: 119774540

Following gene: 119774542

Centisome position: 39.57

GC content: 58.14

Gene sequence:

>2580_bases
ATGAAGTTTGCACTATCCAAAACTACGCTGGCCCTTGCCTGTGTCCTTGGTGGCGTCATGTCAGGCAAGGTGAGCGCAGC
AGAATCCTCATCGCTGACCGAGCGGGATGTTAATCGCTGGCCAGAGGCCGTTTACCATACCCCAATTCAGGCGGATGTTG
AGGCAAAGGTTCATAAGCTGCTGGCCGCAATGACACTTGAGCAAAAAGTGGCGCAAATTATCCAGCCGGAAATTCGCGAC
TTTGGCGTTGAGGATATGCGTCGTTATGGCTTTGGCTCCTTCCTCAATGGTGGCGGTTCATTCCCCGGTAATAATAACAG
GGCAAAGGCGGCCGATTGGGTGGCGCTGGCAGACCAGATGTACCACGCCGCCATGGATGACAGTATCGATGGAATTGCCA
TTCCGCCCATGTGGGGCACAGATGCCGTTCACGGTCATGGCAATGTGTTTGGCGCCACCTTGTTCCCCCATAACATTGGC
TTGGGTGCAACGCAAAACCCCCAGCTGATTAAAGCCATCGCGGCGGCCACGGCCAAAGAAGTGCGCGCAACCGGGATCGA
CTGGGTGTTTGCGCCTACCGTTGCTCTGGTGGATAACCTGCGCTGGGGTCGAACTTATGAAGGCTATGCCCGGGATCCTG
AGCTGATTGAACGCTACGCCGAGGCCTTTGTCGATGGCATGCAGGGCGAGGGCAAAAGTTGGCTGGGTGACGATTACACC
CTGGCCACTGCCAAACACTTTATCGGCGATGGCGGCACTGATAATGGTGACGATCGCGGTGACACCAGGGTAGATGAAAA
CACTCTGATAGCCCGCCATGGTCAGGGTTACGTGGGTGCACTGGGTCATGGCGTGCAAACCGTGATGGCCTCTTTTAACA
GTTGGAACGGCGAAAAGCTCCACGGCAGCAAATACCTGCTCACCGATGTGCTCAAAGAGCGCATGGGATTTGATGGGGTT
GTGGTTGGCGATTGGCTCGGCCATGGCTTTGTACCGGGCTGCAGTTACGAGCACTGCGCTGAAGCCGTGAATGCCGGGGT
GGACATACTGATGGCCCCGGGGGACAGCTGGAAAGCACTGTACGCCAATACCATCGCGGATGTGAAATCCGGGGTCTTGC
CGCTTTCCCGTCTTGATGATGCGGTGAAGCGCGTGTTGCGGGTAAAGCTGCGTGCGGGTCTGTTTGATAACAAGGCGCCG
TCAGCGAACCCCTATGCCGGTAAACAGGAATGGATAGGGCATCCAGAGCACCGCGCCATTGCCCGTCAGGCGGTTGCCGA
GTCTTTGGTGCTGCTCAAAAACAACCGCCCAGCCAATGGGGCGCGCCCTGTGCTGCCCATTGCCGCCAATGCCAGGGTCT
TGGTGGTGGGCGAAGGCGCTGACAGCATTCCACAGCAGTCGGGTGGTTGGAGCATGACCTGGCAGGGGACCGAAGTCACC
AATGCGGACTTCCCCGGTGCCACCAGTATTTTTGCCGGCATCAAGGCAGCGCTGAACGCCGCTGGCGGTGATGCTCTCCT
GAGCTCCGATGGCACTATCCCCGTGGGATTCAAACCCGATGTGGTGATAGCCGTCTATGGTGAGCAACCCTACGCCGAAG
GCAACGGCGATTTGGATAACCTCGAGTATCAGCGCGGTGACAAGCGTTCTCTGGCCATGCTCAGCGCACTGAAGGCAACC
GGATTACCCCTGGTGTCCGTGGTTTTGTCCGGCAGACCCCTGTGGATGAACCCTGAAATCAACGTATCGGATGCCTTTGT
GGCCGCCTGGCTGCCCGGCAGCGAAGGTGCGGGTGTGGCAGATGTGCTGATTGGCGATAAAAACGCTCAGCCCCGAGCCG
ATTTCAAGGGGCGCATGCCATTCCCATGGCCCGCCACTCCATCAGCCGATGGTTTTGTGTCTGATACGGGCAGTGCAGGG
CAAGACCAGCCCAAGCCCCTGTTCAGCCTCTGGCAGGGCTTTGATTATCGGTCTGATGCCACGCTTGCCGCACTCAGCGA
GGACAACGGCAGCTCGGAGGCAGACAACCGACTGGCGATTTTCGATAAAGCCATCAAGGCGCCCTGGCATTTGGCGGTAG
GAGACGATAAGGGACTGCACCGTGTTGGTCCCGGTCTTTGGCAGCAGGGTCCATGGGCCGTGCGCAGTGTGAATCGCATT
GTGCAGGAAGATGCCCGCCGGTTTGAGTTCGGCGCCGCCGGTACCCTCAGCTTCCGTGATGATTTTACTTTGGACTTGCG
CCGCTTTGCGCCCGACTCATCACTGCTTTCTTTCGATATTGCCCTGACGGCCTTGCCCGGAAAGTTGCAACTGTCGATGG
TCTGTGAAGGCGGCTGTCGTCAAGCCGTGGAGTTGTCCGGGCAGTTAAAAGCCGATGGTCAGTGGCAGCGTGTTGAAGTG
CCGCTGTCATGTTTCGGAGTAACGGCTGATGAGCTGGCACGCACTTTCAGCCCCATGACCATGTCACTTCCTCAGGGGGG
CACCCTGACGCTGGCGAATGTCAGCCTCGAAGGAATGGTCCAACGGGATGCGTCTGCCAAGGCAGTGGAATGTGGATTGC
CGCCGGTCAGCGACAAATGA

Upstream 100 bases:

>100_bases
ATTCTGTTGGCTTGTCTGCCTCATTCATTCTGCCGGTGCTCTGCTACGGCTACATCCTCTTTTATGGCCTGAAGGGCTCT
GTACCCCGGGAGGCTGGTCA

Downstream 100 bases:

>100_bases
CAGCACTGAGCATGACCGCGACATGCCGCGCTGAGATGAAAAACACCATCAACATGGAGAATGAGATGTATCGCTCTGGG
ATTGATTTGGGCGGCACCAA

Product: beta-glucosidase

Products: NA

Alternate protein names: Beta-D-glucoside glucohydrolase; Cellobiase; Gentiobiase [H]

Number of amino acids: Translated: 859; Mature: 859

Protein sequence:

>859_residues
MKFALSKTTLALACVLGGVMSGKVSAAESSSLTERDVNRWPEAVYHTPIQADVEAKVHKLLAAMTLEQKVAQIIQPEIRD
FGVEDMRRYGFGSFLNGGGSFPGNNNRAKAADWVALADQMYHAAMDDSIDGIAIPPMWGTDAVHGHGNVFGATLFPHNIG
LGATQNPQLIKAIAAATAKEVRATGIDWVFAPTVALVDNLRWGRTYEGYARDPELIERYAEAFVDGMQGEGKSWLGDDYT
LATAKHFIGDGGTDNGDDRGDTRVDENTLIARHGQGYVGALGHGVQTVMASFNSWNGEKLHGSKYLLTDVLKERMGFDGV
VVGDWLGHGFVPGCSYEHCAEAVNAGVDILMAPGDSWKALYANTIADVKSGVLPLSRLDDAVKRVLRVKLRAGLFDNKAP
SANPYAGKQEWIGHPEHRAIARQAVAESLVLLKNNRPANGARPVLPIAANARVLVVGEGADSIPQQSGGWSMTWQGTEVT
NADFPGATSIFAGIKAALNAAGGDALLSSDGTIPVGFKPDVVIAVYGEQPYAEGNGDLDNLEYQRGDKRSLAMLSALKAT
GLPLVSVVLSGRPLWMNPEINVSDAFVAAWLPGSEGAGVADVLIGDKNAQPRADFKGRMPFPWPATPSADGFVSDTGSAG
QDQPKPLFSLWQGFDYRSDATLAALSEDNGSSEADNRLAIFDKAIKAPWHLAVGDDKGLHRVGPGLWQQGPWAVRSVNRI
VQEDARRFEFGAAGTLSFRDDFTLDLRRFAPDSSLLSFDIALTALPGKLQLSMVCEGGCRQAVELSGQLKADGQWQRVEV
PLSCFGVTADELARTFSPMTMSLPQGGTLTLANVSLEGMVQRDASAKAVECGLPPVSDK

Sequences:

>Translated_859_residues
MKFALSKTTLALACVLGGVMSGKVSAAESSSLTERDVNRWPEAVYHTPIQADVEAKVHKLLAAMTLEQKVAQIIQPEIRD
FGVEDMRRYGFGSFLNGGGSFPGNNNRAKAADWVALADQMYHAAMDDSIDGIAIPPMWGTDAVHGHGNVFGATLFPHNIG
LGATQNPQLIKAIAAATAKEVRATGIDWVFAPTVALVDNLRWGRTYEGYARDPELIERYAEAFVDGMQGEGKSWLGDDYT
LATAKHFIGDGGTDNGDDRGDTRVDENTLIARHGQGYVGALGHGVQTVMASFNSWNGEKLHGSKYLLTDVLKERMGFDGV
VVGDWLGHGFVPGCSYEHCAEAVNAGVDILMAPGDSWKALYANTIADVKSGVLPLSRLDDAVKRVLRVKLRAGLFDNKAP
SANPYAGKQEWIGHPEHRAIARQAVAESLVLLKNNRPANGARPVLPIAANARVLVVGEGADSIPQQSGGWSMTWQGTEVT
NADFPGATSIFAGIKAALNAAGGDALLSSDGTIPVGFKPDVVIAVYGEQPYAEGNGDLDNLEYQRGDKRSLAMLSALKAT
GLPLVSVVLSGRPLWMNPEINVSDAFVAAWLPGSEGAGVADVLIGDKNAQPRADFKGRMPFPWPATPSADGFVSDTGSAG
QDQPKPLFSLWQGFDYRSDATLAALSEDNGSSEADNRLAIFDKAIKAPWHLAVGDDKGLHRVGPGLWQQGPWAVRSVNRI
VQEDARRFEFGAAGTLSFRDDFTLDLRRFAPDSSLLSFDIALTALPGKLQLSMVCEGGCRQAVELSGQLKADGQWQRVEV
PLSCFGVTADELARTFSPMTMSLPQGGTLTLANVSLEGMVQRDASAKAVECGLPPVSDK
>Mature_859_residues
MKFALSKTTLALACVLGGVMSGKVSAAESSSLTERDVNRWPEAVYHTPIQADVEAKVHKLLAAMTLEQKVAQIIQPEIRD
FGVEDMRRYGFGSFLNGGGSFPGNNNRAKAADWVALADQMYHAAMDDSIDGIAIPPMWGTDAVHGHGNVFGATLFPHNIG
LGATQNPQLIKAIAAATAKEVRATGIDWVFAPTVALVDNLRWGRTYEGYARDPELIERYAEAFVDGMQGEGKSWLGDDYT
LATAKHFIGDGGTDNGDDRGDTRVDENTLIARHGQGYVGALGHGVQTVMASFNSWNGEKLHGSKYLLTDVLKERMGFDGV
VVGDWLGHGFVPGCSYEHCAEAVNAGVDILMAPGDSWKALYANTIADVKSGVLPLSRLDDAVKRVLRVKLRAGLFDNKAP
SANPYAGKQEWIGHPEHRAIARQAVAESLVLLKNNRPANGARPVLPIAANARVLVVGEGADSIPQQSGGWSMTWQGTEVT
NADFPGATSIFAGIKAALNAAGGDALLSSDGTIPVGFKPDVVIAVYGEQPYAEGNGDLDNLEYQRGDKRSLAMLSALKAT
GLPLVSVVLSGRPLWMNPEINVSDAFVAAWLPGSEGAGVADVLIGDKNAQPRADFKGRMPFPWPATPSADGFVSDTGSAG
QDQPKPLFSLWQGFDYRSDATLAALSEDNGSSEADNRLAIFDKAIKAPWHLAVGDDKGLHRVGPGLWQQGPWAVRSVNRI
VQEDARRFEFGAAGTLSFRDDFTLDLRRFAPDSSLLSFDIALTALPGKLQLSMVCEGGCRQAVELSGQLKADGQWQRVEV
PLSCFGVTADELARTFSPMTMSLPQGGTLTLANVSLEGMVQRDASAKAVECGLPPVSDK

Specific function: Unknown

COG id: COG1472

COG function: function code G; Beta-glucosidase-related glycosidases

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 3 family [H]

Homologues:

Organism=Escherichia coli, GI1788453, Length=622, Percent_Identity=28.2958199356913, Blast_Score=187, Evalue=3e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019800
- InterPro:   IPR002772
- InterPro:   IPR001764
- InterPro:   IPR017853 [H]

Pfam domain/function: PF00933 Glyco_hydro_3; PF01915 Glyco_hydro_3_C [H]

EC number: =3.2.1.21 [H]

Molecular weight: Translated: 91698; Mature: 91698

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFALSKTTLALACVLGGVMSGKVSAAESSSLTERDVNRWPEAVYHTPIQADVEAKVHKL
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCHHHCCCCCCCHHHHHHHHH
LAAMTLEQKVAQIIQPEIRDFGVEDMRRYGFGSFLNGGGSFPGNNNRAKAADWVALADQM
HHHHHHHHHHHHHHCHHHHHCCHHHHHHHCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHH
YHAAMDDSIDGIAIPPMWGTDAVHGHGNVFGATLFPHNIGLGATQNPQLIKAIAAATAKE
HHHHHCCCCCCEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH
VRATGIDWVFAPTVALVDNLRWGRTYEGYARDPELIERYAEAFVDGMQGEGKSWLGDDYT
HHHCCCCEEHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEE
LATAKHFIGDGGTDNGDDRGDTRVDENTLIARHGQGYVGALGHGVQTVMASFNSWNGEKL
HHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEE
HGSKYLLTDVLKERMGFDGVVVGDWLGHGFVPGCSYEHCAEAVNAGVDILMAPGDSWKAL
CCCHHHHHHHHHHHCCCCCEEEECHHCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCHHH
YANTIADVKSGVLPLSRLDDAVKRVLRVKLRAGLFDNKAPSANPYAGKQEWIGHPEHRAI
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCHHHHH
ARQAVAESLVLLKNNRPANGARPVLPIAANARVLVVGEGADSIPQQSGGWSMTWQGTEVT
HHHHHHHHHHEEECCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCEEEEECCCEEC
NADFPGATSIFAGIKAALNAAGGDALLSSDGTIPVGFKPDVVIAVYGEQPYAEGNGDLDN
CCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCEEECCCCCEEEEEECCCCCCCCCCCCCC
LEYQRGDKRSLAMLSALKATGLPLVSVVLSGRPLWMNPEINVSDAFVAAWLPGSEGAGVA
CHHCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCEEECCCCCCCCCEEEEECCCCCCCCEE
DVLIGDKNAQPRADFKGRMPFPWPATPSADGFVSDTGSAGQDQPKPLFSLWQGFDYRSDA
EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCC
TLAALSEDNGSSEADNRLAIFDKAIKAPWHLAVGDDKGLHRVGPGLWQQGPWAVRSVNRI
EEEEEECCCCCCCCCCEEEEHHHHHCCCEEEEECCCCCCHHCCCCCCCCCCHHHHHHHHH
VQEDARRFEFGAAGTLSFRDDFTLDLRRFAPDSSLLSFDIALTALPGKLQLSMVCEGGCR
HHHHHHHEECCCCEEEECCCCCEEHHHHCCCCCCEEEEEEEEEECCCCEEEEEEECCCCH
QAVELSGQLKADGQWQRVEVPLSCFGVTADELARTFSPMTMSLPQGGTLTLANVSLEGMV
HHHHCCCCCCCCCCEEEEECCHHHCCCCHHHHHHHCCCCEEECCCCCEEEEEECCCHHHH
QRDASAKAVECGLPPVSDK
HCCCCCCEEECCCCCCCCC
>Mature Secondary Structure
MKFALSKTTLALACVLGGVMSGKVSAAESSSLTERDVNRWPEAVYHTPIQADVEAKVHKL
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCHHHCCCCCCCHHHHHHHHH
LAAMTLEQKVAQIIQPEIRDFGVEDMRRYGFGSFLNGGGSFPGNNNRAKAADWVALADQM
HHHHHHHHHHHHHHCHHHHHCCHHHHHHHCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHH
YHAAMDDSIDGIAIPPMWGTDAVHGHGNVFGATLFPHNIGLGATQNPQLIKAIAAATAKE
HHHHHCCCCCCEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH
VRATGIDWVFAPTVALVDNLRWGRTYEGYARDPELIERYAEAFVDGMQGEGKSWLGDDYT
HHHCCCCEEHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEE
LATAKHFIGDGGTDNGDDRGDTRVDENTLIARHGQGYVGALGHGVQTVMASFNSWNGEKL
HHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEE
HGSKYLLTDVLKERMGFDGVVVGDWLGHGFVPGCSYEHCAEAVNAGVDILMAPGDSWKAL
CCCHHHHHHHHHHHCCCCCEEEECHHCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCHHH
YANTIADVKSGVLPLSRLDDAVKRVLRVKLRAGLFDNKAPSANPYAGKQEWIGHPEHRAI
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCHHHHH
ARQAVAESLVLLKNNRPANGARPVLPIAANARVLVVGEGADSIPQQSGGWSMTWQGTEVT
HHHHHHHHHHEEECCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCEEEEECCCEEC
NADFPGATSIFAGIKAALNAAGGDALLSSDGTIPVGFKPDVVIAVYGEQPYAEGNGDLDN
CCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCEEECCCCCEEEEEECCCCCCCCCCCCCC
LEYQRGDKRSLAMLSALKATGLPLVSVVLSGRPLWMNPEINVSDAFVAAWLPGSEGAGVA
CHHCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCEEECCCCCCCCCEEEEECCCCCCCCEE
DVLIGDKNAQPRADFKGRMPFPWPATPSADGFVSDTGSAGQDQPKPLFSLWQGFDYRSDA
EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCC
TLAALSEDNGSSEADNRLAIFDKAIKAPWHLAVGDDKGLHRVGPGLWQQGPWAVRSVNRI
EEEEEECCCCCCCCCCEEEEHHHHHCCCEEEEECCCCCCHHCCCCCCCCCCHHHHHHHHH
VQEDARRFEFGAAGTLSFRDDFTLDLRRFAPDSSLLSFDIALTALPGKLQLSMVCEGGCR
HHHHHHHEECCCCEEEECCCCCEEHHHHCCCCCCEEEEEEEEEECCCCEEEEEEECCCCH
QAVELSGQLKADGQWQRVEVPLSCFGVTADELARTFSPMTMSLPQGGTLTLANVSLEGMV
HHHHCCCCCCCCCCEEEEECCHHHCCCCHHHHHHHCCCCEEECCCCCEEEEEECCCHHHH
QRDASAKAVECGLPPVSDK
HCCCCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]