The gene/protein map for NC_008700 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is gluP [H]

Identifier: 119774540

GI number: 119774540

Start: 1702793

End: 1704040

Strand: Direct

Name: gluP [H]

Synonym: Sama_1403

Alternate gene names: 119774540

Gene position: 1702793-1704040 (Clockwise)

Preceding gene: 119774534

Following gene: 119774541

Centisome position: 39.54

GC content: 57.45

Gene sequence:

>1248_bases
ATGGCAACTGTACCTATTGCCAACGCTAATCACGCAGGCGCTGCCGGCGCAGAGAACTATCGTTTTGCGCTCGGCTCACT
CACCACATTGTTTTTTATGTGGGGTTTTATCACCTGTCTTAACGACATCCTTATTCCGCATCTGAAAGCCGTCTTCAGCC
TGAACTATGCCCAGGCGATGTTAATTCAGTTTTGTTTCTTTGGTGCCTATTTTCTGGTGTCGGTACCGGCTGGTGTCCTG
GTCAAACGTCTCGGCTACCAAAAGGGCATAGTGGTTGGCTTGTTAACCGCAGCGCTGGGCTGTGGTCTCTTTTATCCGGC
GGCGGTATCGGCCACGTATGGCGTGTTTTTGGGGGCACTCTTTGTGCTTGCCAGCGGCATTACCGTGCTGCAGGTGGCGG
CCAATCCCTATGTGACGGCGCTGGGACCGGTGCAAACAGCCTCAAGCCGTCTGACCCTGACCCAGGCGTTTAACTCCCTG
GGTACCACCATAGCCCCGGCCTTTGGCTCTGTGCTTATCCTGTCGGTGGCCGTTGGCGCCTCTGCCGAGGCCGAAGCCGA
TGCGGTCAAGCTGCCCTATCTGCTGCTGTGTGGCATGTTGATTGTGCTGGCGGTGGTGTTTGCACTGCTGAAATTGCCCC
ATATCCATGACCAGGAAGATGAGGTGGCCGCGACTGGCCAGAGCGCGCTTGCCCATCGCCATCTGGTGCTCGGCGCCATA
GGCATATTCGTTTATGTGGGCGGTGAAGTGGCCATTGGCAGCTTTTTGGTGAACTTTTTGGGTGAATCCCATGTGGCGGG
CATGGCCGAGGCCGATGCAGCCCATTACATCGCCTTTTACTGGGGCGGTGCCATGGTGGGGCGTTTTATCGGTGCGGCCG
TGATGCAAAAAGTGGATGCCGGCAAGGTGCTGGGATTCAATGCCACCATGGCGGCCCTGCTGGTACTGGTTGCCATGAAC
AGCAGCGGCGCCCTGGCCATGTGGGCGATTCTGGCGGTGGGGCTGTTTAACTCCATTATGTTTCCGACCATCTTCAGTCT
GGCGCTGAAAAACCTGGGCCCGGCGACAGCCCAGGGCTCGGGTATTCTGTGTCTGGCGATTGTGGGTGGCGCCCTGGTGC
CTTTGCTGCAGGGGCTTCTGGCTGATTCTGTTGGCTTGTCTGCCTCATTCATTCTGCCGGTGCTCTGCTACGGCTACATC
CTCTTTTATGGCCTGAAGGGCTCTGTACCCCGGGAGGCTGGTCAATGA

Upstream 100 bases:

>100_bases
TTACATTAATCTAGTGGCAGAATAGCCAAAGGTCAATCGTCAAAGCGGTCGACACTGTAAATCCGAAAGAAGCAAACCCG
AAAATACAAGGGGAGAACTC

Downstream 100 bases:

>100_bases
AGTTTGCACTATCCAAAACTACGCTGGCCCTTGCCTGTGTCCTTGGTGGCGTCATGTCAGGCAAGGTGAGCGCAGCAGAA
TCCTCATCGCTGACCGAGCG

Product: glucose/galactose transporter

Products: Proton [Cytoplasm]; L-fucose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 414

Protein sequence:

>415_residues
MATVPIANANHAGAAGAENYRFALGSLTTLFFMWGFITCLNDILIPHLKAVFSLNYAQAMLIQFCFFGAYFLVSVPAGVL
VKRLGYQKGIVVGLLTAALGCGLFYPAAVSATYGVFLGALFVLASGITVLQVAANPYVTALGPVQTASSRLTLTQAFNSL
GTTIAPAFGSVLILSVAVGASAEAEADAVKLPYLLLCGMLIVLAVVFALLKLPHIHDQEDEVAATGQSALAHRHLVLGAI
GIFVYVGGEVAIGSFLVNFLGESHVAGMAEADAAHYIAFYWGGAMVGRFIGAAVMQKVDAGKVLGFNATMAALLVLVAMN
SSGALAMWAILAVGLFNSIMFPTIFSLALKNLGPATAQGSGILCLAIVGGALVPLLQGLLADSVGLSASFILPVLCYGYI
LFYGLKGSVPREAGQ

Sequences:

>Translated_415_residues
MATVPIANANHAGAAGAENYRFALGSLTTLFFMWGFITCLNDILIPHLKAVFSLNYAQAMLIQFCFFGAYFLVSVPAGVL
VKRLGYQKGIVVGLLTAALGCGLFYPAAVSATYGVFLGALFVLASGITVLQVAANPYVTALGPVQTASSRLTLTQAFNSL
GTTIAPAFGSVLILSVAVGASAEAEADAVKLPYLLLCGMLIVLAVVFALLKLPHIHDQEDEVAATGQSALAHRHLVLGAI
GIFVYVGGEVAIGSFLVNFLGESHVAGMAEADAAHYIAFYWGGAMVGRFIGAAVMQKVDAGKVLGFNATMAALLVLVAMN
SSGALAMWAILAVGLFNSIMFPTIFSLALKNLGPATAQGSGILCLAIVGGALVPLLQGLLADSVGLSASFILPVLCYGYI
LFYGLKGSVPREAGQ
>Mature_414_residues
ATVPIANANHAGAAGAENYRFALGSLTTLFFMWGFITCLNDILIPHLKAVFSLNYAQAMLIQFCFFGAYFLVSVPAGVLV
KRLGYQKGIVVGLLTAALGCGLFYPAAVSATYGVFLGALFVLASGITVLQVAANPYVTALGPVQTASSRLTLTQAFNSLG
TTIAPAFGSVLILSVAVGASAEAEADAVKLPYLLLCGMLIVLAVVFALLKLPHIHDQEDEVAATGQSALAHRHLVLGAIG
IFVYVGGEVAIGSFLVNFLGESHVAGMAEADAAHYIAFYWGGAMVGRFIGAAVMQKVDAGKVLGFNATMAALLVLVAMNS
SGALAMWAILAVGLFNSIMFPTIFSLALKNLGPATAQGSGILCLAIVGGALVPLLQGLLADSVGLSASFILPVLCYGYIL
FYGLKGSVPREAGQ

Specific function: Intake of glucose and galactose (Potential) [H]

COG id: COG0738

COG function: function code G; Fucose permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. FHS transporter (TC 2.A.1.7) family [H]

Homologues:

Organism=Escherichia coli, GI1789166, Length=422, Percent_Identity=34.8341232227488, Blast_Score=231, Evalue=8e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005964
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 42850; Mature: 42719

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATVPIANANHAGAAGAENYRFALGSLTTLFFMWGFITCLNDILIPHLKAVFSLNYAQAM
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIQFCFFGAYFLVSVPAGVLVKRLGYQKGIVVGLLTAALGCGLFYPAAVSATYGVFLGAL
HHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVLASGITVLQVAANPYVTALGPVQTASSRLTLTQAFNSLGTTIAPAFGSVLILSVAVGA
HHHHCCCCEEEEECCCCEEECCCHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
SAEAEADAVKLPYLLLCGMLIVLAVVFALLKLPHIHDQEDEVAATGQSALAHRHLVLGAI
CCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHH
GIFVYVGGEVAIGSFLVNFLGESHVAGMAEADAAHYIAFYWGGAMVGRFIGAAVMQKVDA
HHHHHCCCHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GKVLGFNATMAALLVLVAMNSSGALAMWAILAVGLFNSIMFPTIFSLALKNLGPATAQGS
CCEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GILCLAIVGGALVPLLQGLLADSVGLSASFILPVLCYGYILFYGLKGSVPREAGQ
CEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
ATVPIANANHAGAAGAENYRFALGSLTTLFFMWGFITCLNDILIPHLKAVFSLNYAQAM
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIQFCFFGAYFLVSVPAGVLVKRLGYQKGIVVGLLTAALGCGLFYPAAVSATYGVFLGAL
HHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVLASGITVLQVAANPYVTALGPVQTASSRLTLTQAFNSLGTTIAPAFGSVLILSVAVGA
HHHHCCCCEEEEECCCCEEECCCHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
SAEAEADAVKLPYLLLCGMLIVLAVVFALLKLPHIHDQEDEVAATGQSALAHRHLVLGAI
CCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHH
GIFVYVGGEVAIGSFLVNFLGESHVAGMAEADAAHYIAFYWGGAMVGRFIGAAVMQKVDA
HHHHHCCCHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GKVLGFNATMAALLVLVAMNSSGALAMWAILAVGLFNSIMFPTIFSLALKNLGPATAQGS
CCEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GILCLAIVGGALVPLLQGLLADSVGLSASFILPVLCYGYILFYGLKGSVPREAGQ
CEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; L-fucose [Periplasm] [C]

Specific reaction: Proton [Periplasm] + L-fucose [Periplasm] = Proton [Cytoplasm] + L-fucose [Cytoplasm] [C]

General reaction: Permease [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9168605 [H]