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The map label for this gene is ucpA [C]

Identifier: 119774504

GI number: 119774504

Start: 1659088

End: 1659984

Strand: Direct

Name: ucpA [C]

Synonym: Sama_1367

Alternate gene names: 119774504

Gene position: 1659088-1659984 (Clockwise)

Preceding gene: 119774502

Following gene: 119774505

Centisome position: 38.53

GC content: 58.75

Gene sequence:

>897_bases
ATGCGATTCGATAACCAGACTGCCCTGATCTCCGGTGCCGCATCCGGTTTGGGACGCGCCTATGCGCTGGCACTGGCTGA
GCGTGGCGCCAGCGTCATGCTGATTGATTGCTTGCCCGAAGAGGCCGCAGAAGTACAAAGTCTGCTTAAGGCGCTCGACG
TCATGGGGGCCATGTCCCGCTATTGGTCCGTTGACGTGGGAGAACCCGACGCCATAGAGGCCTGGGCGGCGGCATTTGAA
GCCAGCGGGGCTGGTGTGGATTTGCTTATCAATAATGCCGGTATGCACACCCACGGCAGCTTTGAGCATCAGTCAATTAC
CGCCATCCGTCGCCAGTTGCAGGTGGACTTGCTCGGCAGCATCGCCCTGACACACGCGCTGTGGCCTGGAATGATGAACC
GGGGCTATGGCCGGGTTGTGATGTCCACCGGTGTCAGTGGTCTTTATGGCGATCTGCATCAAAGTGCCTTTGCCTGCAGC
AAAATGGCGCTCATAGGCCTGGTAAATGGCCTGGCCGCCGAAGGCCTGCCCCGCAATGTGATGGTGAACAGCCTCTGCCC
CCTTGCCCACACCGCCATGACAGACGCCCATTTGGCACCACAGGTCAAACCACTGTTCTCCAAGGAAATAGTGACGGCTT
CCATGCTGTTTTTGCTGAGCGCTCAGGCGCCCAGTGGGCGCCATTTGCTCGCCGGAGGCGGCAGTGTCAGTGAACTTTGC
ATTGCGGAGCACAGGTATTGTTATTTTGAATCTGATCTACGCACCCCCGAAGTGATTGCCGCCCATTGGTCCGATATCGC
CAACGCCTGGCCCATCCAAAAACACGCCAACGGTGAAGACCAGATCCTCGCCTTTGCCAGGCGTGCTGCCCACGAGCAGG
GCATTCGACTCGACTGA

Upstream 100 bases:

>100_bases
TGGGGCCTTCGGGTAAATTTGCCGTCAAGGTCAAAGTTTTACCGTTAACGCTGTGCTTTATTTAATCGGCTGTTTGATTT
TTGCGCCTAAGGAAAGCGAG

Downstream 100 bases:

>100_bases
GACTCGCCAGAGCATGGCGCTTTTTGTTACTCTCTTGGCAATTGACTTTAAATCAGAGAGATAACATGAGTCAGGTATTG
AACGATCTATTGTCACTGCT

Product: short chain dehydrogenase/reductase family oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MRFDNQTALISGAASGLGRAYALALAERGASVMLIDCLPEEAAEVQSLLKALDVMGAMSRYWSVDVGEPDAIEAWAAAFE
ASGAGVDLLINNAGMHTHGSFEHQSITAIRRQLQVDLLGSIALTHALWPGMMNRGYGRVVMSTGVSGLYGDLHQSAFACS
KMALIGLVNGLAAEGLPRNVMVNSLCPLAHTAMTDAHLAPQVKPLFSKEIVTASMLFLLSAQAPSGRHLLAGGGSVSELC
IAEHRYCYFESDLRTPEVIAAHWSDIANAWPIQKHANGEDQILAFARRAAHEQGIRLD

Sequences:

>Translated_298_residues
MRFDNQTALISGAASGLGRAYALALAERGASVMLIDCLPEEAAEVQSLLKALDVMGAMSRYWSVDVGEPDAIEAWAAAFE
ASGAGVDLLINNAGMHTHGSFEHQSITAIRRQLQVDLLGSIALTHALWPGMMNRGYGRVVMSTGVSGLYGDLHQSAFACS
KMALIGLVNGLAAEGLPRNVMVNSLCPLAHTAMTDAHLAPQVKPLFSKEIVTASMLFLLSAQAPSGRHLLAGGGSVSELC
IAEHRYCYFESDLRTPEVIAAHWSDIANAWPIQKHANGEDQILAFARRAAHEQGIRLD
>Mature_298_residues
MRFDNQTALISGAASGLGRAYALALAERGASVMLIDCLPEEAAEVQSLLKALDVMGAMSRYWSVDVGEPDAIEAWAAAFE
ASGAGVDLLINNAGMHTHGSFEHQSITAIRRQLQVDLLGSIALTHALWPGMMNRGYGRVVMSTGVSGLYGDLHQSAFACS
KMALIGLVNGLAAEGLPRNVMVNSLCPLAHTAMTDAHLAPQVKPLFSKEIVTASMLFLLSAQAPSGRHLLAGGGSVSELC
IAEHRYCYFESDLRTPEVIAAHWSDIANAWPIQKHANGEDQILAFARRAAHEQGIRLD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI4504505, Length=280, Percent_Identity=31.0714285714286, Blast_Score=122, Evalue=4e-28,
Organism=Homo sapiens, GI7657478, Length=183, Percent_Identity=28.4153005464481, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI157739938, Length=202, Percent_Identity=25.7425742574257, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI4503817, Length=186, Percent_Identity=27.9569892473118, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI40254992, Length=238, Percent_Identity=27.3109243697479, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI20149619, Length=189, Percent_Identity=28.042328042328, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI32483357, Length=252, Percent_Identity=27.7777777777778, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI210032110, Length=218, Percent_Identity=25.2293577981651, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI223718074, Length=202, Percent_Identity=30.1980198019802, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI7706318, Length=185, Percent_Identity=26.4864864864865, Blast_Score=68, Evalue=9e-12,
Organism=Escherichia coli, GI87082100, Length=213, Percent_Identity=30.5164319248826, Blast_Score=95, Evalue=6e-21,
Organism=Escherichia coli, GI1787335, Length=228, Percent_Identity=29.8245614035088, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI1787905, Length=254, Percent_Identity=26.7716535433071, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1788459, Length=243, Percent_Identity=25.9259259259259, Blast_Score=61, Evalue=1e-10,
Organism=Caenorhabditis elegans, GI17568967, Length=304, Percent_Identity=29.6052631578947, Blast_Score=120, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI17567345, Length=169, Percent_Identity=31.3609467455621, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI193203117, Length=221, Percent_Identity=28.0542986425339, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17570069, Length=181, Percent_Identity=29.8342541436464, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI193203115, Length=216, Percent_Identity=28.7037037037037, Blast_Score=82, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI71997402, Length=181, Percent_Identity=28.1767955801105, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17508895, Length=219, Percent_Identity=24.6575342465753, Blast_Score=67, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6322861, Length=281, Percent_Identity=30.6049822064057, Blast_Score=119, Evalue=4e-28,
Organism=Drosophila melanogaster, GI18859837, Length=281, Percent_Identity=29.5373665480427, Blast_Score=112, Evalue=3e-25,
Organism=Drosophila melanogaster, GI21358495, Length=191, Percent_Identity=30.8900523560209, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI21355631, Length=193, Percent_Identity=27.979274611399, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI281364892, Length=169, Percent_Identity=26.0355029585799, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI21357041, Length=189, Percent_Identity=25.9259259259259, Blast_Score=65, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 31804; Mature: 31804

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFDNQTALISGAASGLGRAYALALAERGASVMLIDCLPEEAAEVQSLLKALDVMGAMSR
CCCCCCHHEEEHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH
YWSVDVGEPDAIEAWAAAFEASGAGVDLLINNAGMHTHGSFEHQSITAIRRQLQVDLLGS
HEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH
IALTHALWPGMMNRGYGRVVMSTGVSGLYGDLHQSAFACSKMALIGLVNGLAAEGLPRNV
HHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
MVNSLCPLAHTAMTDAHLAPQVKPLFSKEIVTASMLFLLSAQAPSGRHLLAGGGSVSELC
HHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHH
IAEHRYCYFESDLRTPEVIAAHWSDIANAWPIQKHANGEDQILAFARRAAHEQGIRLD
HHHCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MRFDNQTALISGAASGLGRAYALALAERGASVMLIDCLPEEAAEVQSLLKALDVMGAMSR
CCCCCCHHEEEHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH
YWSVDVGEPDAIEAWAAAFEASGAGVDLLINNAGMHTHGSFEHQSITAIRRQLQVDLLGS
HEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH
IALTHALWPGMMNRGYGRVVMSTGVSGLYGDLHQSAFACSKMALIGLVNGLAAEGLPRNV
HHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
MVNSLCPLAHTAMTDAHLAPQVKPLFSKEIVTASMLFLLSAQAPSGRHLLAGGGSVSELC
HHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHH
IAEHRYCYFESDLRTPEVIAAHWSDIANAWPIQKHANGEDQILAFARRAAHEQGIRLD
HHHCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230 [H]