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The map label for this gene is ycaR [C]

Identifier: 119774476

GI number: 119774476

Start: 1632573

End: 1632758

Strand: Direct

Name: ycaR [C]

Synonym: Sama_1339

Alternate gene names: 119774476

Gene position: 1632573-1632758 (Clockwise)

Preceding gene: 119774475

Following gene: 119774477

Centisome position: 37.91

GC content: 55.91

Gene sequence:

>186_bases
ATGGCCTTTGATAAAAAACTCCTGGAAATCGTTGCTTGCCCCGTGTGCAAGGGCAAGCTGGAATACGACAAGGCGGCAGA
GCAGCTGATCTGTAAGTTCGACCGACTGGCCTATCCCATCACCGAGGGGATCCCGGTACTGTTGGAAAACCGTGCCACGC
CCTGGCAGGAGCAAACTGCCGAGTGA

Upstream 100 bases:

>100_bases
TGGTGGTATCTCGCGGTTGATGCGAATCTACCGCCAACATTTTCAACCAGGCTGCTCGATGCCCTGAACCGGGCGGCCAC
AGCCAAGCAAGGAAACACCC

Downstream 100 bases:

>100_bases
GCTTTAACGCCTTAAAAAGCCTCCCATCGGGAGGCTTTTTTTATGCTGATTGTGGCTGCGTCCCGTACCCGCGAGCCATT
TCTCGATGACAGATTTACCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 61; Mature: 60

Protein sequence:

>61_residues
MAFDKKLLEIVACPVCKGKLEYDKAAEQLICKFDRLAYPITEGIPVLLENRATPWQEQTAE

Sequences:

>Translated_61_residues
MAFDKKLLEIVACPVCKGKLEYDKAAEQLICKFDRLAYPITEGIPVLLENRATPWQEQTAE
>Mature_60_residues
AFDKKLLEIVACPVCKGKLEYDKAAEQLICKFDRLAYPITEGIPVLLENRATPWQEQTAE

Specific function: Unknown

COG id: COG2835

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0434 family

Homologues:

Organism=Escherichia coli, GI1787146, Length=50, Percent_Identity=60, Blast_Score=70, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1339_SHEAM (A1S590)

Other databases:

- EMBL:   CP000507
- RefSeq:   YP_927216.1
- ProteinModelPortal:   A1S590
- SMR:   A1S590
- STRING:   A1S590
- GeneID:   4603591
- GenomeReviews:   CP000507_GR
- KEGG:   saz:Sama_1339
- NMPDR:   fig|326297.7.peg.1266
- eggNOG:   COG2835
- HOGENOM:   HBG713593
- OMA:   YDSENEQ
- PhylomeDB:   A1S590
- HAMAP:   MF_01187
- InterPro:   IPR005651

Pfam domain/function: PF03966 Trm112p

EC number: NA

Molecular weight: Translated: 6940; Mature: 6809

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFDKKLLEIVACPVCKGKLEYDKAAEQLICKFDRLAYPITEGIPVLLENRATPWQEQTA
CCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCC
E
C
>Mature Secondary Structure 
AFDKKLLEIVACPVCKGKLEYDKAAEQLICKFDRLAYPITEGIPVLLENRATPWQEQTA
CCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCC
E
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA