| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is adk
Identifier: 119774452
GI number: 119774452
Start: 1599152
End: 1599796
Strand: Direct
Name: adk
Synonym: Sama_1315
Alternate gene names: 119774452
Gene position: 1599152-1599796 (Clockwise)
Preceding gene: 119774451
Following gene: 119774453
Centisome position: 37.14
GC content: 54.88
Gene sequence:
>645_bases ATGCGCATTATCCTATTGGGCGCCCCAGGTGCCGGTAAAGGTACCCAGGCTCAGTTCATCATGGAACACTACGGAATCCC CCAGATTTCTACCGGCGACATGCTGCGTGCAGCGGTCAAAGCCGGTACGCCCCTGGGTTTGGAAGCCAAGAAAGTGATGG ACGCAGGTCAGCTGGTTTCTGATGAACTGATCATCGGTCTGGTGAAGGAGCGCATTGCTCAGGACGACTGCGCCAACGGT TTCCTGCTGGACGGTTTCCCACGCACCATTCCTCAGGCCGATGCCATGGCTGCCAATGGCATCAGCATCGATCACGTGAT TGAAATTGACGTGCCTGATGAAGAAATTGTGAACCGCATGAGCGGTCGCCGCGTACATCCAGGCTCAGGCCGTGTTTATC ACGTTGTGTTCAATCCACCCAAGGTGGAAGGCAAGGATGACGTGACCGGTGAAGATCTGGTTATCCGTCCGGATGATGAA GAGAGCACAGTGCGTAAGCGTCTGGGTATTTACCACGAGCAAACCAAGCCATTGGTTGATTACTATGGCAAGGTTGCCGC CGAAGGTAACACCAAGTACACCAAGTTTGACGGTACCCAGAGCGTGGCCGAGGTCAGCAAGTTGATCCAGGCTGCCCTGA GCTGA
Upstream 100 bases:
>100_bases GAGGCTAAAGTCGAAAGAGCAGGCCTTCTAAAGCGCGGGTTTATGTGCGAAGATCGCCGCCCTAAGAAGAATATCGATGC GAATTTAAGAGGACTCCCCG
Downstream 100 bases:
>100_bases TAGCCAGAGATCGCACTTTGTAGAAAAGCCTGTGAAAACAGGCTTTTTTGTTTTTTGGCCTATGATAGGCTAAACCAAAG TTTGCCAATTTGAGGTGAGA
Product: adenylate kinase
Products: NA
Alternate protein names: AK; ATP-AMP transphosphorylase
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MRIILLGAPGAGKGTQAQFIMEHYGIPQISTGDMLRAAVKAGTPLGLEAKKVMDAGQLVSDELIIGLVKERIAQDDCANG FLLDGFPRTIPQADAMAANGISIDHVIEIDVPDEEIVNRMSGRRVHPGSGRVYHVVFNPPKVEGKDDVTGEDLVIRPDDE ESTVRKRLGIYHEQTKPLVDYYGKVAAEGNTKYTKFDGTQSVAEVSKLIQAALS
Sequences:
>Translated_214_residues MRIILLGAPGAGKGTQAQFIMEHYGIPQISTGDMLRAAVKAGTPLGLEAKKVMDAGQLVSDELIIGLVKERIAQDDCANG FLLDGFPRTIPQADAMAANGISIDHVIEIDVPDEEIVNRMSGRRVHPGSGRVYHVVFNPPKVEGKDDVTGEDLVIRPDDE ESTVRKRLGIYHEQTKPLVDYYGKVAAEGNTKYTKFDGTQSVAEVSKLIQAALS >Mature_214_residues MRIILLGAPGAGKGTQAQFIMEHYGIPQISTGDMLRAAVKAGTPLGLEAKKVMDAGQLVSDELIIGLVKERIAQDDCANG FLLDGFPRTIPQADAMAANGISIDHVIEIDVPDEEIVNRMSGRRVHPGSGRVYHVVFNPPKVEGKDDVTGEDLVIRPDDE ESTVRKRLGIYHEQTKPLVDYYGKVAAEGNTKYTKFDGTQSVAEVSKLIQAALS
Specific function: Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. This small ubiquitous enzyme involved in the energy metabolism and nucleotide synthesis, is essential for maintenance and cell growth
COG id: COG0563
COG function: function code F; Adenylate kinase and related kinases
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenylate kinase family
Homologues:
Organism=Homo sapiens, GI7524346, Length=218, Percent_Identity=46.7889908256881, Blast_Score=201, Evalue=4e-52, Organism=Homo sapiens, GI4502013, Length=218, Percent_Identity=46.7889908256881, Blast_Score=201, Evalue=5e-52, Organism=Homo sapiens, GI19923437, Length=184, Percent_Identity=45.1086956521739, Blast_Score=170, Evalue=8e-43, Organism=Homo sapiens, GI310110345, Length=182, Percent_Identity=41.7582417582418, Blast_Score=145, Evalue=2e-35, Organism=Homo sapiens, GI53832003, Length=182, Percent_Identity=41.7582417582418, Blast_Score=145, Evalue=2e-35, Organism=Homo sapiens, GI8051579, Length=182, Percent_Identity=41.7582417582418, Blast_Score=145, Evalue=2e-35, Organism=Homo sapiens, GI53832001, Length=182, Percent_Identity=41.7582417582418, Blast_Score=145, Evalue=2e-35, Organism=Homo sapiens, GI4502011, Length=195, Percent_Identity=30.7692307692308, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI22749187, Length=206, Percent_Identity=27.6699029126214, Blast_Score=99, Evalue=3e-21, Organism=Homo sapiens, GI7706497, Length=213, Percent_Identity=29.5774647887324, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI28144899, Length=195, Percent_Identity=27.6923076923077, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI28144897, Length=195, Percent_Identity=27.6923076923077, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI21450759, Length=139, Percent_Identity=26.6187050359712, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI237858799, Length=138, Percent_Identity=26.8115942028986, Blast_Score=65, Evalue=4e-11, Organism=Escherichia coli, GI1786680, Length=213, Percent_Identity=73.2394366197183, Blast_Score=320, Evalue=4e-89, Organism=Caenorhabditis elegans, GI17552384, Length=188, Percent_Identity=47.8723404255319, Blast_Score=186, Evalue=8e-48, Organism=Caenorhabditis elegans, GI17537943, Length=213, Percent_Identity=33.3333333333333, Blast_Score=126, Evalue=8e-30, Organism=Caenorhabditis elegans, GI17567503, Length=213, Percent_Identity=30.9859154929577, Blast_Score=105, Evalue=1e-23, Organism=Caenorhabditis elegans, GI17550688, Length=187, Percent_Identity=26.7379679144385, Blast_Score=72, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6320432, Length=210, Percent_Identity=48.0952380952381, Blast_Score=207, Evalue=1e-54, Organism=Saccharomyces cerevisiae, GI6321018, Length=188, Percent_Identity=43.6170212765958, Blast_Score=146, Evalue=2e-36, Organism=Saccharomyces cerevisiae, GI6322828, Length=214, Percent_Identity=28.0373831775701, Blast_Score=94, Evalue=2e-20, Organism=Drosophila melanogaster, GI22026816, Length=184, Percent_Identity=51.6304347826087, Blast_Score=197, Evalue=4e-51, Organism=Drosophila melanogaster, GI17737899, Length=184, Percent_Identity=44.5652173913043, Blast_Score=155, Evalue=2e-38, Organism=Drosophila melanogaster, GI24645822, Length=184, Percent_Identity=44.5652173913043, Blast_Score=155, Evalue=2e-38, Organism=Drosophila melanogaster, GI24663208, Length=181, Percent_Identity=29.8342541436464, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI17647141, Length=181, Percent_Identity=29.8342541436464, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI221459597, Length=207, Percent_Identity=25.1207729468599, Blast_Score=67, Evalue=7e-12, Organism=Drosophila melanogaster, GI21356893, Length=207, Percent_Identity=25.1207729468599, Blast_Score=67, Evalue=7e-12,
Paralogues:
None
Copy number: 1640 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 847 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): KAD_SHEAM (A1S566)
Other databases:
- EMBL: CP000507 - RefSeq: YP_927192.1 - ProteinModelPortal: A1S566 - SMR: A1S566 - STRING: A1S566 - GeneID: 4603567 - GenomeReviews: CP000507_GR - KEGG: saz:Sama_1315 - NMPDR: fig|326297.7.peg.1242 - eggNOG: COG0563 - HOGENOM: HBG630208 - OMA: RTYHVKY - PhylomeDB: A1S566 - ProtClustDB: PRK00279 - GO: GO:0005737 - HAMAP: MF_00235 - InterPro: IPR006259 - InterPro: IPR000850 - InterPro: IPR007862 - PANTHER: PTHR23359 - PRINTS: PR00094 - TIGRFAMs: TIGR01351
Pfam domain/function: PF00406 ADK; PF05191 ADK_lid
EC number: =2.7.4.3
Molecular weight: Translated: 23155; Mature: 23155
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: PS00113 ADENYLATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIILLGAPGAGKGTQAQFIMEHYGIPQISTGDMLRAAVKAGTPLGLEAKKVMDAGQLVS CEEEEEECCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHH DELIIGLVKERIAQDDCANGFLLDGFPRTIPQADAMAANGISIDHVIEIDVPDEEIVNRM HHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCHHHHCCCCCEEEEEEEECCHHHHHHHH SGRRVHPGSGRVYHVVFNPPKVEGKDDVTGEDLVIRPDDEESTVRKRLGIYHEQTKPLVD CCCEECCCCCCEEEEEECCCCCCCCCCCCCCCEEECCCCHHHHHHHHHCCHHHCCCCHHH YYGKVAAEGNTKYTKFDGTQSVAEVSKLIQAALS HHHHEEECCCCEEEEECCHHHHHHHHHHHHHHCC >Mature Secondary Structure MRIILLGAPGAGKGTQAQFIMEHYGIPQISTGDMLRAAVKAGTPLGLEAKKVMDAGQLVS CEEEEEECCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHH DELIIGLVKERIAQDDCANGFLLDGFPRTIPQADAMAANGISIDHVIEIDVPDEEIVNRM HHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCHHHHCCCCCEEEEEEEECCHHHHHHHH SGRRVHPGSGRVYHVVFNPPKVEGKDDVTGEDLVIRPDDEESTVRKRLGIYHEQTKPLVD CCCEECCCCCCEEEEEECCCCCCCCCCCCCCCEEECCCCHHHHHHHHHCCHHHCCCCHHH YYGKVAAEGNTKYTKFDGTQSVAEVSKLIQAALS HHHHEEECCCCEEEEECCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA