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The map label for this gene is rimK1

Identifier: 119774436

GI number: 119774436

Start: 1584817

End: 1585722

Strand: Direct

Name: rimK1

Synonym: Sama_1299

Alternate gene names: 119774436

Gene position: 1584817-1585722 (Clockwise)

Preceding gene: 119774435

Following gene: 119774437

Centisome position: 36.8

GC content: 55.96

Gene sequence:

>906_bases
ATGCGGATCGCTGTTTTATCTCAGGGGCCAGAACTCTATTCCACCCGTCGTTTGGTGGAGGCCGCCAAAGAGCGGGGTCA
TGAGGTCAGGGTCATTAACCCCCTTGAGTGTTATATGAACATCAATATGCGGGCGTCCAGCATTCACATTGCCGGGGAAG
AGCTGCCTATTTTCGATGCCGTGATCCCCCGCATCGGCTCGGCCATCACCTTTTACGGCTGTGCCGTGCTGAGGCAATTT
GAAATGATGGGGGTGTATACCCTAAATGAATCTGTTGCCGTTACCCGCTCCCGCGATAAGCTACGTTCAATGCAGCTGAT
GTCTCGTCGCGGTATAGGGTTGCCCATCACCGGATTTGCCAACAAGCCGTCGGACATTCCTGACTTGATTGAGATGGTTG
GTGGTGCCCCGCTGGTGATTAAGTTGCTGGAAGGCACCCAGGGCATAGGTGTGGTGCTTGCCGAGACCCGCAAAGCGGCA
GAGAGTGTGATTGAAGCCTTTATGGGCCTTAAGGCCAACATCATGGTGCAGGAATATATCCGCGAGGCCAATGGCGCCGA
TATTCGCTGTTTTGTGTTGGGTGACAAGGTGGTGGCGGCCATGAAGCGTCAGGCGGCGCCTGGCGAGTTTCGCTCCAATT
TGCACCGCGGTGGCAGTGCGACTCTCGTTAAGCTGACACCGGAAGAGCGCTCTGTCGCCGTCCGTGCCGCCAAGACCATG
GGACTGAATGTGGCTGGCGTCGATTTGCTGCGTTCAAACCACGGCCCGCTGGTGATGGAAGTCAACTCATCTCCCGGACT
CGAAGGCATAGAAGGCGCTACCGGCAAGGATGTTGCCGGTGCCATCATTGCCTTTATTGAGAAAGCCGCCCATAAGAAAC
CCAAGCAAACGGGTGCCCGAGGTTAA

Upstream 100 bases:

>100_bases
CGCTATAGTTATTGGCACCGGCCACAGCGGCAATTGGCCGAGATTGCTTTTATACAAAAGGCGCGTATGATGCGCGAGTT
TTTCATTATCGGAGTCATGA

Downstream 100 bases:

>100_bases
GGACATTTTGTGATCCAGGATGGATTTTAAGGTTAACTCTTTGTAAGCCCATAAGAACTTTGATCGCCGTCAAACTCGCC
ATTGTCCATGGGCGTAAGCT

Product: ribosomal protein S6 modification protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MRIAVLSQGPELYSTRRLVEAAKERGHEVRVINPLECYMNINMRASSIHIAGEELPIFDAVIPRIGSAITFYGCAVLRQF
EMMGVYTLNESVAVTRSRDKLRSMQLMSRRGIGLPITGFANKPSDIPDLIEMVGGAPLVIKLLEGTQGIGVVLAETRKAA
ESVIEAFMGLKANIMVQEYIREANGADIRCFVLGDKVVAAMKRQAAPGEFRSNLHRGGSATLVKLTPEERSVAVRAAKTM
GLNVAGVDLLRSNHGPLVMEVNSSPGLEGIEGATGKDVAGAIIAFIEKAAHKKPKQTGARG

Sequences:

>Translated_301_residues
MRIAVLSQGPELYSTRRLVEAAKERGHEVRVINPLECYMNINMRASSIHIAGEELPIFDAVIPRIGSAITFYGCAVLRQF
EMMGVYTLNESVAVTRSRDKLRSMQLMSRRGIGLPITGFANKPSDIPDLIEMVGGAPLVIKLLEGTQGIGVVLAETRKAA
ESVIEAFMGLKANIMVQEYIREANGADIRCFVLGDKVVAAMKRQAAPGEFRSNLHRGGSATLVKLTPEERSVAVRAAKTM
GLNVAGVDLLRSNHGPLVMEVNSSPGLEGIEGATGKDVAGAIIAFIEKAAHKKPKQTGARG
>Mature_301_residues
MRIAVLSQGPELYSTRRLVEAAKERGHEVRVINPLECYMNINMRASSIHIAGEELPIFDAVIPRIGSAITFYGCAVLRQF
EMMGVYTLNESVAVTRSRDKLRSMQLMSRRGIGLPITGFANKPSDIPDLIEMVGGAPLVIKLLEGTQGIGVVLAETRKAA
ESVIEAFMGLKANIMVQEYIREANGADIRCFVLGDKVVAAMKRQAAPGEFRSNLHRGGSATLVKLTPEERSVAVRAAKTM
GLNVAGVDLLRSNHGPLVMEVNSSPGLEGIEGATGKDVAGAIIAFIEKAAHKKPKQTGARG

Specific function: Responsible for the addition of glutamate residues to the C-terminus of ribosomal protein S6

COG id: COG0189

COG function: function code HJ; Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-grasp domain

Homologues:

Organism=Homo sapiens, GI164663810, Length=214, Percent_Identity=26.6355140186916, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI134254462, Length=218, Percent_Identity=29.3577981651376, Blast_Score=83, Evalue=3e-16,
Organism=Escherichia coli, GI1787076, Length=290, Percent_Identity=67.9310344827586, Blast_Score=416, Evalue=1e-118,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIMK1_SHEAM (A1S550)

Other databases:

- EMBL:   CP000507
- RefSeq:   YP_927176.1
- STRING:   A1S550
- GeneID:   4603551
- GenomeReviews:   CP000507_GR
- KEGG:   saz:Sama_1299
- NMPDR:   fig|326297.7.peg.1226
- eggNOG:   COG0189
- HOGENOM:   HBG679591
- OMA:   CREPRLY
- PhylomeDB:   A1S550
- ProtClustDB:   CLSK906665
- GO:   GO:0006412
- HAMAP:   MF_01552
- InterPro:   IPR011761
- InterPro:   IPR013651
- InterPro:   IPR013815
- InterPro:   IPR013816
- InterPro:   IPR004666
- Gene3D:   G3DSA:3.30.1490.20
- Gene3D:   G3DSA:3.30.470.20
- TIGRFAMs:   TIGR00768

Pfam domain/function: PF08443 RimK

EC number: NA

Molecular weight: Translated: 32363; Mature: 32363

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: PS50975 ATP_GRASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIAVLSQGPELYSTRRLVEAAKERGHEVRVINPLECYMNINMRASSIHIAGEELPIFDA
CEEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCEEEEEECCEEEEEEEECCCCCCHHHH
VIPRIGSAITFYGCAVLRQFEMMGVYTLNESVAVTRSRDKLRSMQLMSRRGIGLPITGFA
HHHHHCCHHHHHHHHHHHHHHHHEEEEECCCEEEECCHHHHHHHHHHHHCCCCCEECCCC
NKPSDIPDLIEMVGGAPLVIKLLEGTQGIGVVLAETRKAAESVIEAFMGLKANIMVQEYI
CCCCCHHHHHHHHCCCCEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHH
REANGADIRCFVLGDKVVAAMKRQAAPGEFRSNLHRGGSATLVKLTPEERSVAVRAAKTM
HHCCCCEEEEEEECHHHHHHHHHCCCCHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHH
GLNVAGVDLLRSNHGPLVMEVNSSPGLEGIEGATGKDVAGAIIAFIEKAAHKKPKQTGAR
CCCEEHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
G
C
>Mature Secondary Structure
MRIAVLSQGPELYSTRRLVEAAKERGHEVRVINPLECYMNINMRASSIHIAGEELPIFDA
CEEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCEEEEEECCEEEEEEEECCCCCCHHHH
VIPRIGSAITFYGCAVLRQFEMMGVYTLNESVAVTRSRDKLRSMQLMSRRGIGLPITGFA
HHHHHCCHHHHHHHHHHHHHHHHEEEEECCCEEEECCHHHHHHHHHHHHCCCCCEECCCC
NKPSDIPDLIEMVGGAPLVIKLLEGTQGIGVVLAETRKAAESVIEAFMGLKANIMVQEYI
CCCCCHHHHHHHHCCCCEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHH
REANGADIRCFVLGDKVVAAMKRQAAPGEFRSNLHRGGSATLVKLTPEERSVAVRAAKTM
HHCCCCEEEEEEECHHHHHHHHHCCCCHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHH
GLNVAGVDLLRSNHGPLVMEVNSSPGLEGIEGATGKDVAGAIIAFIEKAAHKKPKQTGAR
CCCEEHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Glu; Ribosomal protein S6 [C]

Specific reaction: Catalyzes the addition of glutamic acids to the carboxyl end of ribosomal protein S6 [C]

General reaction: Ligases; Forming Carbon-Nitrogen Bonds; Acid-D-Amino-Acid Ligases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA