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The map label for this gene is fdx [H]

Identifier: 119774435

GI number: 119774435

Start: 1584324

End: 1584659

Strand: Direct

Name: fdx [H]

Synonym: Sama_1298

Alternate gene names: 119774435

Gene position: 1584324-1584659 (Clockwise)

Preceding gene: 119774434

Following gene: 119774436

Centisome position: 36.79

GC content: 52.68

Gene sequence:

>336_bases
ATGCCGCAAATCGTATTTTTGCCTCACGAAGAACTCTGTCCTGATGGTGCCGTGGTTGAGGCCAAGGTGGGTGAGTCCAT
ATTGGATGTGGCCTTAAGAAACGGGATCCACATTGAACATGCCTGTGAAAAATCCTGTGCCTGCACCACCTGCCACGTGG
TGGTACGTGAAGGCTTTGATGAGCTCGAGCCATCGGACGAACTGGAAGATGATATGCTCGACAAAGCCTGGGGACTGGAG
CCGGAAAGCCGCCTCTCTTGTCAGGCCAAGGTTGTGGATTGTGACCTGGTGGTCGACATTCCCAAGTACACCATCAACAT
GGTCAGTGAAGGCTAA

Upstream 100 bases:

>100_bases
GACTGGACAACCAAACCCAGGAGTTTGCCGCCAAACGTATGGACAATTCTATCCGCAATGCCCTCAAGGGCCAGTCGGTC
GACACTATATAGGTAACAAC

Downstream 100 bases:

>100_bases
TCAGCGCCTTTCGATGATGAAAGCCAGTCTTATGACTGGCTTTTTTTTCGGCCGTCTCGCTATAGTTATTGGCACCGGCC
ACAGCGGCAATTGGCCGAGA

Product: ferredoxin, 2Fe-2S

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MPQIVFLPHEELCPDGAVVEAKVGESILDVALRNGIHIEHACEKSCACTTCHVVVREGFDELEPSDELEDDMLDKAWGLE
PESRLSCQAKVVDCDLVVDIPKYTINMVSEG

Sequences:

>Translated_111_residues
MPQIVFLPHEELCPDGAVVEAKVGESILDVALRNGIHIEHACEKSCACTTCHVVVREGFDELEPSDELEDDMLDKAWGLE
PESRLSCQAKVVDCDLVVDIPKYTINMVSEG
>Mature_110_residues
PQIVFLPHEELCPDGAVVEAKVGESILDVALRNGIHIEHACEKSCACTTCHVVVREGFDELEPSDELEDDMLDKAWGLEP
ESRLSCQAKVVDCDLVVDIPKYTINMVSEG

Specific function: Ferredoxin are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI72534754, Length=97, Percent_Identity=45.360824742268, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1788874, Length=110, Percent_Identity=77.2727272727273, Blast_Score=177, Evalue=1e-46,
Organism=Caenorhabditis elegans, GI17544202, Length=97, Percent_Identity=42.2680412371134, Blast_Score=65, Evalue=5e-12,
Organism=Saccharomyces cerevisiae, GI6325004, Length=88, Percent_Identity=48.8636363636364, Blast_Score=69, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24661503, Length=96, Percent_Identity=42.7083333333333, Blast_Score=72, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001055
- InterPro:   IPR018298
- InterPro:   IPR012675
- InterPro:   IPR011536
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 12226; Mature: 12095

Theoretical pI: Translated: 4.04; Mature: 4.04

Prosite motif: PS51085 2FE2S_FER_2 ; PS00814 ADX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
9.0 %Cys+Met (Translated Protein)
6.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQIVFLPHEELCPDGAVVEAKVGESILDVALRNGIHIEHACEKSCACTTCHVVVREGFD
CCEEEECCCHHHCCCCCEEEHHHCHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHCCCC
ELEPSDELEDDMLDKAWGLEPESRLSCQAKVVDCDLVVDIPKYTINMVSEG
CCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEECCCCEEEEECCC
>Mature Secondary Structure 
PQIVFLPHEELCPDGAVVEAKVGESILDVALRNGIHIEHACEKSCACTTCHVVVREGFD
CEEEECCCHHHCCCCCEEEHHHCHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHCCCC
ELEPSDELEDDMLDKAWGLEPESRLSCQAKVVDCDLVVDIPKYTINMVSEG
CCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEECCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: 2Fe-2S Cluster. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8809750; 10984043 [H]