Click here to switch to the map view.

The map label for this gene is 119774131

Identifier: 119774131

GI number: 119774131

Start: 1205023

End: 1206381

Strand: Reverse

Name: 119774131

Synonym: Sama_0994

Alternate gene names: NA

Gene position: 1206381-1205023 (Counterclockwise)

Preceding gene: 119774132

Following gene: 119774130

Centisome position: 28.02

GC content: 54.38

Gene sequence:

>1359_bases
GTGGCTTCAGAAAAACAAAATCACAACATCAAGACGATACTGACCTTTATCGTCCCCTCCCTGATAGGGCTTCTGCTGTT
TATGACGCCGGTCAGCTATCAGGATGCCATCACCATTCCCATCGCGATTATTTCAAAAGCCCTGCAACATGCGCTGAGTG
ATAAGGCGACAGCCATAGTGACGGCAGTCGTGGTTCTGACGACCCTGGTGTCTCTCATCACCAAGGTGGCAAAGCCCAAA
TTTATTACCGAAAACGGTTTTTTGAATGCGCTGTTTAACGTCAGCCCCATGTGGTTTTTCATCCGTATGTTGGGTGCGGC
CTTCATCCTGATGACCTTTGCCGGAGTGGGTCCAGAAGCCATTACGTCAGGCAACACCGGTGGTCTGGTGCTGAACGACC
TGTTGCCCGTGCTGCTCAGCGTGTTTATTTTTGCCGGTATGCTGCTGCCACTGCTGCTGAATTTTGGCCTGCTGGAGCTT
TTTGGTGCTCTGCTGACCAAAATCATGCGACCTGTGTTTAACCTGCCCGGCCGCTGTGCCATCGACTGTATGGCCTCCTG
GCTCGGTGATGGCAGTGTGGGGATCCTACTCACCAGCAAACAGTACGAAGGCCGTTTTTACACTGCCCGCGAAGCGGCGG
TCATTGGCACGACCTTCTCGGCGGTATCCATTACCTTCTCGCTGGTGGTGATCTCTCAGGTGAAGCTTGAGGCACTGTTT
GTACCCTTCTACCTGACGGTGTGTCTGGCCGGTATCGTGGCTGCCATTGTGGTGCCCAAGTTGCCACCGCTTTGCTGGAA
AAAAGACAACTACATCGACGGCACCCCGAGACATCCTGACGATGAAGTGGTCCCCGCCGGTCACAGTGTGTTTTCCTGGG
GCTATGACATGGCACTCGCCAAGGCAGCGGCCAGCGGCGGCGTCAAGGAGACCTTTACCGAAGGCGTGAAAAACGTCGCC
GATATGGTGCTGGGAATTTTGCCGGTGGTAATGGCCATAGGTACTGTGGCGCTGATGATTGCCGAATACACACCGATTTT
TGACTACCTCGGCATGCCCTTTATTCCGCTGCTTGAACTGCTGCAAATCCCGGAAGCCACCGCTGCCTCCAAAACTATCG
TTGTGGGCTTTGCAGACATGTTTATCCCATCGATTCTGGCAGCCAGCATCGAATCGGATATGACCCGCTTTGTGATTGCG
GCCCTGTCCGTGACCCAGCTGATTTACATGAGCGAAGTCGGCGCCCTGCTGATTGGTTCGCGCATTCCGGTCAACCTGCC
GGAGCTGTTCGTGATTTTCGTTCTGCGTACTCTGGTCACCCTGCCGGTCATCGCCGGTGTGGCTCACCTGATATTCTGA

Upstream 100 bases:

>100_bases
TGCATGGACATGCACTGGCCGCAAAACAGTTAAACTGCGACTCGACCACGGAATGTGGGGAAACAGAGCTTTATTAGCAA
CAGCTTAAGGTGCCAATACC

Downstream 100 bases:

>100_bases
GCCTGAACCTGAACATGACAAACCGGCGCCTGGCGCCGGTTTTTGTTTTCGGGCTCGCAACTTTGTCTTCAGCTTCTACA
CTTTAACTACTTAATCAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: ORF A [H]

Number of amino acids: Translated: 452; Mature: 451

Protein sequence:

>452_residues
MASEKQNHNIKTILTFIVPSLIGLLLFMTPVSYQDAITIPIAIISKALQHALSDKATAIVTAVVVLTTLVSLITKVAKPK
FITENGFLNALFNVSPMWFFIRMLGAAFILMTFAGVGPEAITSGNTGGLVLNDLLPVLLSVFIFAGMLLPLLLNFGLLEL
FGALLTKIMRPVFNLPGRCAIDCMASWLGDGSVGILLTSKQYEGRFYTAREAAVIGTTFSAVSITFSLVVISQVKLEALF
VPFYLTVCLAGIVAAIVVPKLPPLCWKKDNYIDGTPRHPDDEVVPAGHSVFSWGYDMALAKAAASGGVKETFTEGVKNVA
DMVLGILPVVMAIGTVALMIAEYTPIFDYLGMPFIPLLELLQIPEATAASKTIVVGFADMFIPSILAASIESDMTRFVIA
ALSVTQLIYMSEVGALLIGSRIPVNLPELFVIFVLRTLVTLPVIAGVAHLIF

Sequences:

>Translated_452_residues
MASEKQNHNIKTILTFIVPSLIGLLLFMTPVSYQDAITIPIAIISKALQHALSDKATAIVTAVVVLTTLVSLITKVAKPK
FITENGFLNALFNVSPMWFFIRMLGAAFILMTFAGVGPEAITSGNTGGLVLNDLLPVLLSVFIFAGMLLPLLLNFGLLEL
FGALLTKIMRPVFNLPGRCAIDCMASWLGDGSVGILLTSKQYEGRFYTAREAAVIGTTFSAVSITFSLVVISQVKLEALF
VPFYLTVCLAGIVAAIVVPKLPPLCWKKDNYIDGTPRHPDDEVVPAGHSVFSWGYDMALAKAAASGGVKETFTEGVKNVA
DMVLGILPVVMAIGTVALMIAEYTPIFDYLGMPFIPLLELLQIPEATAASKTIVVGFADMFIPSILAASIESDMTRFVIA
ALSVTQLIYMSEVGALLIGSRIPVNLPELFVIFVLRTLVTLPVIAGVAHLIF
>Mature_451_residues
ASEKQNHNIKTILTFIVPSLIGLLLFMTPVSYQDAITIPIAIISKALQHALSDKATAIVTAVVVLTTLVSLITKVAKPKF
ITENGFLNALFNVSPMWFFIRMLGAAFILMTFAGVGPEAITSGNTGGLVLNDLLPVLLSVFIFAGMLLPLLLNFGLLELF
GALLTKIMRPVFNLPGRCAIDCMASWLGDGSVGILLTSKQYEGRFYTAREAAVIGTTFSAVSITFSLVVISQVKLEALFV
PFYLTVCLAGIVAAIVVPKLPPLCWKKDNYIDGTPRHPDDEVVPAGHSVFSWGYDMALAKAAASGGVKETFTEGVKNVAD
MVLGILPVVMAIGTVALMIAEYTPIFDYLGMPFIPLLELLQIPEATAASKTIVVGFADMFIPSILAASIESDMTRFVIAA
LSVTQLIYMSEVGALLIGSRIPVNLPELFVIFVLRTLVTLPVIAGVAHLIF

Specific function: Unknown

COG id: COG3314

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011642 [H]

Pfam domain/function: PF07670 Gate [H]

EC number: NA

Molecular weight: Translated: 48474; Mature: 48342

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASEKQNHNIKTILTFIVPSLIGLLLFMTPVSYQDAITIPIAIISKALQHALSDKATAIV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHH
TAVVVLTTLVSLITKVAKPKFITENGFLNALFNVSPMWFFIRMLGAAFILMTFAGVGPEA
HHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHH
ITSGNTGGLVLNDLLPVLLSVFIFAGMLLPLLLNFGLLELFGALLTKIMRPVFNLPGRCA
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
IDCMASWLGDGSVGILLTSKQYEGRFYTAREAAVIGTTFSAVSITFSLVVISQVKLEALF
HHHHHHHHCCCCEEEEEECCCCCCCEEECCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
VPFYLTVCLAGIVAAIVVPKLPPLCWKKDNYIDGTPRHPDDEVVPAGHSVFSWGYDMALA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
KAAASGGVKETFTEGVKNVADMVLGILPVVMAIGTVALMIAEYTPIFDYLGMPFIPLLEL
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LQIPEATAASKTIVVGFADMFIPSILAASIESDMTRFVIAALSVTQLIYMSEVGALLIGS
HHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RIPVNLPELFVIFVLRTLVTLPVIAGVAHLIF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
ASEKQNHNIKTILTFIVPSLIGLLLFMTPVSYQDAITIPIAIISKALQHALSDKATAIV
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHH
TAVVVLTTLVSLITKVAKPKFITENGFLNALFNVSPMWFFIRMLGAAFILMTFAGVGPEA
HHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHH
ITSGNTGGLVLNDLLPVLLSVFIFAGMLLPLLLNFGLLELFGALLTKIMRPVFNLPGRCA
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
IDCMASWLGDGSVGILLTSKQYEGRFYTAREAAVIGTTFSAVSITFSLVVISQVKLEALF
HHHHHHHHCCCCEEEEEECCCCCCCEEECCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
VPFYLTVCLAGIVAAIVVPKLPPLCWKKDNYIDGTPRHPDDEVVPAGHSVFSWGYDMALA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
KAAASGGVKETFTEGVKNVADMVLGILPVVMAIGTVALMIAEYTPIFDYLGMPFIPLLEL
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LQIPEATAASKTIVVGFADMFIPSILAASIESDMTRFVIAALSVTQLIYMSEVGALLIGS
HHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RIPVNLPELFVIFVLRTLVTLPVIAGVAHLIF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA