| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is 119773938
Identifier: 119773938
GI number: 119773938
Start: 984758
End: 985237
Strand: Reverse
Name: 119773938
Synonym: Sama_0801
Alternate gene names: NA
Gene position: 985237-984758 (Counterclockwise)
Preceding gene: 119773939
Following gene: 119773937
Centisome position: 22.88
GC content: 55.83
Gene sequence:
>480_bases ATGCAACTCAGGGCGATTCAGGCCAACGATTGGCAAGCAATTCTCAATATTCAGGACGAATGCTACAACGCAGTGGATCC AGAGCCGCTACACGTGCTTAAAAGCAAGTGGGAAGTCTCACCAGACTCTTGTTTTGTAATGGAAAAAGATGGTCAGGTGC TGGGCTACTGCTTGGCGCATCCCTGGGTGGAAACCACTCCGCCACCTCTGTATCACGCCCTGACTGAACTGCCCGCACCC AATACCCTTTATCTGCATGACATGGCCATTTCCGCCCGTGCGCAGGGCCTGGGTGCCGGCGGCAAGGCCCTGTCCAAGCT TAAGCAATTGGCCGAACGCTGGTCACTGAACTCCCTGTCTCTGGTGGCAGTTCAGGGCGCCGACAGCTACTGGCGCCGTC AGGGCTTTGCCGACAGCCAAAGCCTCAAATGTCTTGGCAGCTACAGTGACGATGCCAGCTATATGATACTGCCCCTGTGA
Upstream 100 bases:
>100_bases TTGAGCAGCACCTGCGTCAACGCTATCTGGGCGAATAACCCAGTCTCGGGTATAATTGCGCCCTTTGTGATTTGAACAGG CAGTAAGCAAAGGGCGTACC
Downstream 100 bases:
>100_bases GCCAATTATGCACCCGGCATTGACCACTGTTGCCCTGCTCTGTCTGTCGAATATCTTTATGACATTCGCCTGGTATGGAC ATCTCAAGTCGCTCAACCAT
Product: acetyltransferase
Products: NA
Alternate protein names: Acetyltransferase; Gcn5-Related N-Acetyltransferase; GCN5-Like N-Acetyltransferase; GNAT Family Acetyltransferase; Acetyltransferase GNAT Family Protein
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MQLRAIQANDWQAILNIQDECYNAVDPEPLHVLKSKWEVSPDSCFVMEKDGQVLGYCLAHPWVETTPPPLYHALTELPAP NTLYLHDMAISARAQGLGAGGKALSKLKQLAERWSLNSLSLVAVQGADSYWRRQGFADSQSLKCLGSYSDDASYMILPL
Sequences:
>Translated_159_residues MQLRAIQANDWQAILNIQDECYNAVDPEPLHVLKSKWEVSPDSCFVMEKDGQVLGYCLAHPWVETTPPPLYHALTELPAP NTLYLHDMAISARAQGLGAGGKALSKLKQLAERWSLNSLSLVAVQGADSYWRRQGFADSQSLKCLGSYSDDASYMILPL >Mature_159_residues MQLRAIQANDWQAILNIQDECYNAVDPEPLHVLKSKWEVSPDSCFVMEKDGQVLGYCLAHPWVETTPPPLYHALTELPAP NTLYLHDMAISARAQGLGAGGKALSKLKQLAERWSLNSLSLVAVQGADSYWRRQGFADSQSLKCLGSYSDDASYMILPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17621; Mature: 17621
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLRAIQANDWQAILNIQDECYNAVDPEPLHVLKSKWEVSPDSCFVMEKDGQVLGYCLAH CCEEEECCCCCEEEEEECHHHCCCCCCCHHHHHHHHCCCCCCCEEEECCCCCEEEHEECC PWVETTPPPLYHALTELPAPNTLYLHDMAISARAQGLGAGGKALSKLKQLAERWSLNSLS CCCCCCCCHHHHHHHHCCCCCEEEEEEEEHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEE LVAVQGADSYWRRQGFADSQSLKCLGSYSDDASYMILPL EEEEECCCHHHHHCCCCCCCCEEEEECCCCCCCEEEEEC >Mature Secondary Structure MQLRAIQANDWQAILNIQDECYNAVDPEPLHVLKSKWEVSPDSCFVMEKDGQVLGYCLAH CCEEEECCCCCEEEEEECHHHCCCCCCCHHHHHHHHCCCCCCCEEEECCCCCEEEHEECC PWVETTPPPLYHALTELPAPNTLYLHDMAISARAQGLGAGGKALSKLKQLAERWSLNSLS CCCCCCCCHHHHHHHHCCCCCEEEEEEEEHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEE LVAVQGADSYWRRQGFADSQSLKCLGSYSDDASYMILPL EEEEECCCHHHHHCCCCCCCCEEEEECCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA