Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119773939

Identifier: 119773939

GI number: 119773939

Start: 985300

End: 986781

Strand: Reverse

Name: 119773939

Synonym: Sama_0802

Alternate gene names: NA

Gene position: 986781-985300 (Counterclockwise)

Preceding gene: 119773942

Following gene: 119773938

Centisome position: 22.92

GC content: 57.02

Gene sequence:

>1482_bases
ATGACCACAAGTTACCTAAAGCTCAAGGGCCATTTTGCCCAGATTTCCCACTTTGAACATTTCAGCGCTCTGGGCGACTG
GGATCAGGCCACCATGATGCCCATGGGCGGCAGCGAAGGCCGCAGCGATGCCATGGCAACACTGGCAGGTCATATCCATG
GGCTTCGCACTGCCCCCTGGTTGCTGGACGAAATCAATAATGCCGAGTCTGAGCCCCTCACAGCTCGGGAGCGCGCCAAC
CTGCGGGAGATGAAATACCAGTGCCAGCAGTCAATCGCCGTACCCCAGGCGTTGGTCGAAGCCAAGACCAAGGCCGCCTA
TCAGTGCGAAAATGCCTGGCGCGAGCAGCGTAAAAACAATGACTGGTCAGGCTTTAAACCCAATCTCGAAAACGTGATGG
CGCTGGTACGGGAAGAAGCCGGTCACCGCGCAGCGCTCACTGGGCTCTCACCCTACGATACCTTGCTGGATAAATTTGAA
CCCGGCATGAGAGCCGCCACACTTGAAACCACCTTCGCCGGTCTTCGCAGCACGCTTCCCAGTCTTATCCAGCAGATCCT
CAACAAACAGGCCAGCGAACCGGTTATCCAACTCGACGGGACTTTCGACATAGGCGCCCAGGAGAAGATTGGCCGTGAAC
TCATGACACTGCTGGGGTTTGACTTCAATCAGGGGCGTCTGGATGTGTCCAGCCACCCCTTCTGCGGTGGAGTGCCGGGC
GACGTGCGACTCACCACCCGCTACAGGGAAGATGACTTTACCGGCGCCCTGCTTGGCATCATCCACGAAACCGGCCATGC
CCGCTATGAACAGGGCCTGCCATTGGCGCTTCGGGGCCAACCGGCCGGGCTTGCTCGCTCCATGGGTATCCATGAGAGCC
AGAGTCTGTTTTTTGAAATGCAGCTGGCTGCCAGCAAACCTTTTATCGAGCTCATCACCCCCATCATAAACCGTAATCTT
GGGCGGGATTTCAGCGCCGATGCTCTGGTTAACCTCTATACCCGGGTTAAGCCGGGTCTCATCCGGGTTGATGCCGACGA
AGTCACCTACCCTTGCCATATCCTGCTTCGATTCGACGCCGAAAAGGCATTGATGGACGGCTCACTTACGGTGGCCGACT
TGCCCGACTTCTGGTCAGCGGGCATGCAGGAACTGCTGGGGATTAATACCGATGGCGACTACCGAAATGGCTGCATGCAG
GACATACACTGGACTCTGGGTGAACTCGGGTATTTCCCGAGCTACACCCTGGGGGCCATGTATGCCGCACAGCTGCGCTT
TGCCATGGAAAAAACTCTGGGGCCACTGGAGCAAACCATTGGCCAGGGGCGCCTCGCCGAGGTTTTTGCCTGGCTTGAGC
AACATATCTGGTCACTGGGTTCACTCATGGATACCGACAGCCTGATTAAGGCTGCCACCGGTGAATCACTCAACTTCCAC
TATCTTGAGCAGCACCTGCGTCAACGCTATCTGGGCGAATAA

Upstream 100 bases:

>100_bases
AATCCGAGCATATCAAAGCGTGAGTCTTTGCCAAGCATTTTTACCCGCTTTCGGGGCTTATCCGCTAAGATAGGCGCAAA
CCCACTAAGCTCCCCATCCC

Downstream 100 bases:

>100_bases
CCCAGTCTCGGGTATAATTGCGCCCTTTGTGATTTGAACAGGCAGTAAGCAAAGGGCGTACCATGCAACTCAGGGCGATT
CAGGCCAACGATTGGCAAGC

Product: carboxypeptidase Taq

Products: NA

Alternate protein names: Carboxypeptidase Taq [H]

Number of amino acids: Translated: 493; Mature: 492

Protein sequence:

>493_residues
MTTSYLKLKGHFAQISHFEHFSALGDWDQATMMPMGGSEGRSDAMATLAGHIHGLRTAPWLLDEINNAESEPLTARERAN
LREMKYQCQQSIAVPQALVEAKTKAAYQCENAWREQRKNNDWSGFKPNLENVMALVREEAGHRAALTGLSPYDTLLDKFE
PGMRAATLETTFAGLRSTLPSLIQQILNKQASEPVIQLDGTFDIGAQEKIGRELMTLLGFDFNQGRLDVSSHPFCGGVPG
DVRLTTRYREDDFTGALLGIIHETGHARYEQGLPLALRGQPAGLARSMGIHESQSLFFEMQLAASKPFIELITPIINRNL
GRDFSADALVNLYTRVKPGLIRVDADEVTYPCHILLRFDAEKALMDGSLTVADLPDFWSAGMQELLGINTDGDYRNGCMQ
DIHWTLGELGYFPSYTLGAMYAAQLRFAMEKTLGPLEQTIGQGRLAEVFAWLEQHIWSLGSLMDTDSLIKAATGESLNFH
YLEQHLRQRYLGE

Sequences:

>Translated_493_residues
MTTSYLKLKGHFAQISHFEHFSALGDWDQATMMPMGGSEGRSDAMATLAGHIHGLRTAPWLLDEINNAESEPLTARERAN
LREMKYQCQQSIAVPQALVEAKTKAAYQCENAWREQRKNNDWSGFKPNLENVMALVREEAGHRAALTGLSPYDTLLDKFE
PGMRAATLETTFAGLRSTLPSLIQQILNKQASEPVIQLDGTFDIGAQEKIGRELMTLLGFDFNQGRLDVSSHPFCGGVPG
DVRLTTRYREDDFTGALLGIIHETGHARYEQGLPLALRGQPAGLARSMGIHESQSLFFEMQLAASKPFIELITPIINRNL
GRDFSADALVNLYTRVKPGLIRVDADEVTYPCHILLRFDAEKALMDGSLTVADLPDFWSAGMQELLGINTDGDYRNGCMQ
DIHWTLGELGYFPSYTLGAMYAAQLRFAMEKTLGPLEQTIGQGRLAEVFAWLEQHIWSLGSLMDTDSLIKAATGESLNFH
YLEQHLRQRYLGE
>Mature_492_residues
TTSYLKLKGHFAQISHFEHFSALGDWDQATMMPMGGSEGRSDAMATLAGHIHGLRTAPWLLDEINNAESEPLTARERANL
REMKYQCQQSIAVPQALVEAKTKAAYQCENAWREQRKNNDWSGFKPNLENVMALVREEAGHRAALTGLSPYDTLLDKFEP
GMRAATLETTFAGLRSTLPSLIQQILNKQASEPVIQLDGTFDIGAQEKIGRELMTLLGFDFNQGRLDVSSHPFCGGVPGD
VRLTTRYREDDFTGALLGIIHETGHARYEQGLPLALRGQPAGLARSMGIHESQSLFFEMQLAASKPFIELITPIINRNLG
RDFSADALVNLYTRVKPGLIRVDADEVTYPCHILLRFDAEKALMDGSLTVADLPDFWSAGMQELLGINTDGDYRNGCMQD
IHWTLGELGYFPSYTLGAMYAAQLRFAMEKTLGPLEQTIGQGRLAEVFAWLEQHIWSLGSLMDTDSLIKAATGESLNFHY
LEQHLRQRYLGE

Specific function: Releases amino acids sequentially from the C-terminus with a broad substrate specificity (except for proline) [H]

COG id: COG2317

COG function: function code E; Zn-dependent carboxypeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M32 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001333 [H]

Pfam domain/function: PF02074 Peptidase_M32 [H]

EC number: =3.4.17.19 [H]

Molecular weight: Translated: 54962; Mature: 54831

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSYLKLKGHFAQISHFEHFSALGDWDQATMMPMGGSEGRSDAMATLAGHIHGLRTAPW
CCCCEEEECCHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHCCCHH
LLDEINNAESEPLTARERANLREMKYQCQQSIAVPQALVEAKTKAAYQCENAWREQRKNN
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DWSGFKPNLENVMALVREEAGHRAALTGLSPYDTLLDKFEPGMRAATLETTFAGLRSTLP
CCCCCCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
SLIQQILNKQASEPVIQLDGTFDIGAQEKIGRELMTLLGFDFNQGRLDVSSHPFCGGVPG
HHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCC
DVRLTTRYREDDFTGALLGIIHETGHARYEQGLPLALRGQPAGLARSMGIHESQSLFFEM
CEEEEEEECCCCHHHHHHHHHHHCCCHHHHCCCCEEECCCCCHHHHHCCCCCCHHHEEEE
QLAASKPFIELITPIINRNLGRDFSADALVNLYTRVKPGLIRVDADEVTYPCHILLRFDA
EHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEEECH
EKALMDGSLTVADLPDFWSAGMQELLGINTDGDYRNGCMQDIHWTLGELGYFPSYTLGAM
HHHHHCCCCEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH
YAAQLRFAMEKTLGPLEQTIGQGRLAEVFAWLEQHIWSLGSLMDTDSLIKAATGESLNFH
HHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHH
YLEQHLRQRYLGE
HHHHHHHHHHCCC
>Mature Secondary Structure 
TTSYLKLKGHFAQISHFEHFSALGDWDQATMMPMGGSEGRSDAMATLAGHIHGLRTAPW
CCCEEEECCHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHCCCHH
LLDEINNAESEPLTARERANLREMKYQCQQSIAVPQALVEAKTKAAYQCENAWREQRKNN
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DWSGFKPNLENVMALVREEAGHRAALTGLSPYDTLLDKFEPGMRAATLETTFAGLRSTLP
CCCCCCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
SLIQQILNKQASEPVIQLDGTFDIGAQEKIGRELMTLLGFDFNQGRLDVSSHPFCGGVPG
HHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCC
DVRLTTRYREDDFTGALLGIIHETGHARYEQGLPLALRGQPAGLARSMGIHESQSLFFEM
CEEEEEEECCCCHHHHHHHHHHHCCCHHHHCCCCEEECCCCCHHHHHCCCCCCHHHEEEE
QLAASKPFIELITPIINRNLGRDFSADALVNLYTRVKPGLIRVDADEVTYPCHILLRFDA
EHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEEECH
EKALMDGSLTVADLPDFWSAGMQELLGINTDGDYRNGCMQDIHWTLGELGYFPSYTLGAM
HHHHHCCCCEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH
YAAQLRFAMEKTLGPLEQTIGQGRLAEVFAWLEQHIWSLGSLMDTDSLIKAATGESLNFH
HHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHH
YLEQHLRQRYLGE
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7765282; 1369078 [H]