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The map label for this gene is slyX [H]

Identifier: 119773778

GI number: 119773778

Start: 795983

End: 796207

Strand: Reverse

Name: slyX [H]

Synonym: Sama_0640

Alternate gene names: 119773778

Gene position: 796207-795983 (Counterclockwise)

Preceding gene: 119773779

Following gene: 119773777

Centisome position: 18.49

GC content: 48.89

Gene sequence:

>225_bases
ATGCAAACAGATATAAAGGCAATGCAACAGCAAATCGAAGAGCTGCAAACCAAGCTCGCCTTCACCGAAATGACAGTGGA
AGAGCTTAATCAGGAAGTCATTAAGCTCAACGATGTTGTTGCCAAGCAAACTCACGCCATCCAGATGCTGGTGAGTAAGC
TAAAGGCGATGGAACCGAGCAATATCGCGACCCAGGCGGAAGAAACACCGCCGCCGCACTACTAA

Upstream 100 bases:

>100_bases
GTGCCGTTGTATACTCAGTGGCCGAAACCGGCCTGCCACAAACACCTGTTGCCAGTATCAGCAGCAGTGGCAGAGTGGAA
TACTGGTCAACGAGGTAACA

Downstream 100 bases:

>100_bases
TAATCCGCCGCAGGAACAGGGAATTTCATGGCCAGCATCCAAACCGCCCCCATCGCCATCACAGGTGACCCGGTGCTCTA
CCAAAAAGCCGCACCTGTCA

Product: SlyX protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 74; Mature: 74

Protein sequence:

>74_residues
MQTDIKAMQQQIEELQTKLAFTEMTVEELNQEVIKLNDVVAKQTHAIQMLVSKLKAMEPSNIATQAEETPPPHY

Sequences:

>Translated_74_residues
MQTDIKAMQQQIEELQTKLAFTEMTVEELNQEVIKLNDVVAKQTHAIQMLVSKLKAMEPSNIATQAEETPPPHY
>Mature_74_residues
MQTDIKAMQQQIEELQTKLAFTEMTVEELNQEVIKLNDVVAKQTHAIQMLVSKLKAMEPSNIATQAEETPPPHY

Specific function: Unknown

COG id: COG2900

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the slyX family [H]

Homologues:

Organism=Escherichia coli, GI1789747, Length=68, Percent_Identity=50, Blast_Score=70, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007236 [H]

Pfam domain/function: PF04102 SlyX [H]

EC number: NA

Molecular weight: Translated: 8424; Mature: 8424

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.8 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.8 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTDIKAMQQQIEELQTKLAFTEMTVEELNQEVIKLNDVVAKQTHAIQMLVSKLKAMEPS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
NIATQAEETPPPHY
CCHHCCCCCCCCCC
>Mature Secondary Structure
MQTDIKAMQQQIEELQTKLAFTEMTVEELNQEVIKLNDVVAKQTHAIQMLVSKLKAMEPS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
NIATQAEETPPPHY
CCHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]