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The map label for this gene is yggB [C]

Identifier: 119773752

GI number: 119773752

Start: 767252

End: 767887

Strand: Reverse

Name: yggB [C]

Synonym: Sama_0614

Alternate gene names: 119773752

Gene position: 767887-767252 (Counterclockwise)

Preceding gene: 119773763

Following gene: 119773748

Centisome position: 17.83

GC content: 50.0

Gene sequence:

>636_bases
ATGACAAACCAAATACTGCTTGCCTGTTTTTATTTGCTGGCTTTTTACATTATTCAGCGCAATCTCAAGCGGGTTATCAA
TGCGCTGGCCGAAAAGAAGCAGGTCAGCGCAGCCAGAACCAGCCTCGTCAGCCGCTTTTTAACGGCCGTATTGTTTTTTA
TCACTCTGTCACTGATGGCCGTGTCGGTGGGGCTGGGCTACCACGATGTCGCACTCTTCGTCTCATCAGCCTTTGCAGTG
CTCGGCGTGGCCCTGGTCGCTCAATGGTCCATTCTCAGTAATCTCACCGCAGGCGTACTGATCTTTTTTGTGTTCCCCTA
CCGCATTGGCGATCGCATCAAGGTGGTGGACAAGGACGAAGATATCCGCGGTGTTATTCAAGAGATTGCCCTTTTTCATG
TGCTTATTCAGCGGGATGATGGCAACCTCATCACTTACCCCAACAGTCAGATTCTGCAAAAATCGGTGATTAAGCTACTG
AACCCCGAGGTTTATGACAACAAGGCCACTGAGGCCAAAACGTTGGATATCAAAGCCGTTGAGACCACATCGATGGCATC
AGCCAAAACCGATGAGGCGCTTAAAGACATCGCCAAAGAAACCGCTGAGCAAAAGTCACAACCCAAGGCGCCCTAA

Upstream 100 bases:

>100_bases
AGACAAAATTTTACATCCCGGCCCCTGAATGGCCCTTCACTGGTCCCGGTGTGGCCCTTTAGAATAGGGGTTTCTGCCGA
GATGTTTTCAAAGGGCTATT

Downstream 100 bases:

>100_bases
CCCGCCCCAAAAGAACAACTGCGTAAATTAACAAACAGAAAGAAAAAGCGGCCTCTTGGCCGCTTTTTCTATTAGAGGGT
TCGCTGGAACAGCGCTATGG

Product: hypothetical protein

Products: NA

Alternate protein names: Small-Conductance Mechanosensitive Ion Channel Protein; Small-Conductance Mechanosensitive Channel-Like Protein; Mscs Mechanosensitive Ion Channel; MscS Mechanosensitive Ion Channel

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MTNQILLACFYLLAFYIIQRNLKRVINALAEKKQVSAARTSLVSRFLTAVLFFITLSLMAVSVGLGYHDVALFVSSAFAV
LGVALVAQWSILSNLTAGVLIFFVFPYRIGDRIKVVDKDEDIRGVIQEIALFHVLIQRDDGNLITYPNSQILQKSVIKLL
NPEVYDNKATEAKTLDIKAVETTSMASAKTDEALKDIAKETAEQKSQPKAP

Sequences:

>Translated_211_residues
MTNQILLACFYLLAFYIIQRNLKRVINALAEKKQVSAARTSLVSRFLTAVLFFITLSLMAVSVGLGYHDVALFVSSAFAV
LGVALVAQWSILSNLTAGVLIFFVFPYRIGDRIKVVDKDEDIRGVIQEIALFHVLIQRDDGNLITYPNSQILQKSVIKLL
NPEVYDNKATEAKTLDIKAVETTSMASAKTDEALKDIAKETAEQKSQPKAP
>Mature_210_residues
TNQILLACFYLLAFYIIQRNLKRVINALAEKKQVSAARTSLVSRFLTAVLFFITLSLMAVSVGLGYHDVALFVSSAFAVL
GVALVAQWSILSNLTAGVLIFFVFPYRIGDRIKVVDKDEDIRGVIQEIALFHVLIQRDDGNLITYPNSQILQKSVIKLLN
PEVYDNKATEAKTLDIKAVETTSMASAKTDEALKDIAKETAEQKSQPKAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23353; Mature: 23221

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNQILLACFYLLAFYIIQRNLKRVINALAEKKQVSAARTSLVSRFLTAVLFFITLSLMA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSVGLGYHDVALFVSSAFAVLGVALVAQWSILSNLTAGVLIFFVFPYRIGDRIKVVDKDE
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCH
DIRGVIQEIALFHVLIQRDDGNLITYPNSQILQKSVIKLLNPEVYDNKATEAKTLDIKAV
HHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHCCHHCCCCCCCHHEEEEEHH
ETTSMASAKTDEALKDIAKETAEQKSQPKAP
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TNQILLACFYLLAFYIIQRNLKRVINALAEKKQVSAARTSLVSRFLTAVLFFITLSLMA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSVGLGYHDVALFVSSAFAVLGVALVAQWSILSNLTAGVLIFFVFPYRIGDRIKVVDKDE
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCH
DIRGVIQEIALFHVLIQRDDGNLITYPNSQILQKSVIKLLNPEVYDNKATEAKTLDIKAV
HHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHCCHHCCCCCCCHHEEEEEHH
ETTSMASAKTDEALKDIAKETAEQKSQPKAP
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA