| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is 119773747
Identifier: 119773747
GI number: 119773747
Start: 762136
End: 762660
Strand: Reverse
Name: 119773747
Synonym: Sama_0609
Alternate gene names: NA
Gene position: 762660-762136 (Counterclockwise)
Preceding gene: 119773748
Following gene: 119773746
Centisome position: 17.71
GC content: 51.43
Gene sequence:
>525_bases ATGACCCTGACACCCTCATCACTTTTCAATGCGTATCCAGATTGGTTTACCCGGGCAACGCCCCTGAGGGTGCTTGATTT AGCCTGTGGTTCAGGCCGTAATGGCGTCTGGTTTCTGGAGCGAGGGCATCATGTGACTTTTGTCGATCTGGATACCAGTG CACTGCCACCAGAGATAAAGCACGATCCACTCGCCCACATCTTCCAACTGGATTTGGAGCAAGGGGATACTGTGCCACTG GGGCAGTTTGACATGGTATTGGTATTCAATTACTTGCACAGGCCGCTCATACCATGGATCAAAGATTCAGTGTTACCTGG CGGTCTGGTGGTCTATGAAACCTTCACCGAAGCCCAAGCCAGTATCGGCAGACCCAAAAATCCAGCGTTCCTGCTGGGCA AAAACGAACTCAGAGAACGCTTTACTGACTGGGAACAAGTGTATTATCGTGAGGAAACACCCGCGACTCCCGCTGGCAGC GGCGCCTATAAAGCCACGATAATCTGCCGTAAACCTCTGGATTAA
Upstream 100 bases:
>100_bases TTTTGCTGCTTTCTGTGCTGGTATCCCATGGACCTGCCGGGCTCAGGCATTACTCCATCTGGCACAGACGGCGCATAGAA AGCCGCAAGGAAATCAAAGG
Downstream 100 bases:
>100_bases CTATGTTTCCTTACCCAGACCAATACCGTAATGCCATCCCGCCGCTGATGACAGGCTTCATTGTGCTTTGGGCACTTGTG GGACGAGCCATCGCAGGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: Tellurite Resistance Protein TehB; Tellurite Resistance Protein; SAM-Dependent Methyltransferase; S-Adenosyl-L-Methionine-Dependent Methyltransferases; Methyltransferase; Tellurite Resistance Methyltransferase TehB Core
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MTLTPSSLFNAYPDWFTRATPLRVLDLACGSGRNGVWFLERGHHVTFVDLDTSALPPEIKHDPLAHIFQLDLEQGDTVPL GQFDMVLVFNYLHRPLIPWIKDSVLPGGLVVYETFTEAQASIGRPKNPAFLLGKNELRERFTDWEQVYYREETPATPAGS GAYKATIICRKPLD
Sequences:
>Translated_174_residues MTLTPSSLFNAYPDWFTRATPLRVLDLACGSGRNGVWFLERGHHVTFVDLDTSALPPEIKHDPLAHIFQLDLEQGDTVPL GQFDMVLVFNYLHRPLIPWIKDSVLPGGLVVYETFTEAQASIGRPKNPAFLLGKNELRERFTDWEQVYYREETPATPAGS GAYKATIICRKPLD >Mature_173_residues TLTPSSLFNAYPDWFTRATPLRVLDLACGSGRNGVWFLERGHHVTFVDLDTSALPPEIKHDPLAHIFQLDLEQGDTVPLG QFDMVLVFNYLHRPLIPWIKDSVLPGGLVVYETFTEAQASIGRPKNPAFLLGKNELRERFTDWEQVYYREETPATPAGSG AYKATIICRKPLD
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19645; Mature: 19513
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLTPSSLFNAYPDWFTRATPLRVLDLACGSGRNGVWFLERGHHVTFVDLDTSALPPEIK CCCCHHHHHHCCCHHHCCCCCCEEEEEECCCCCCCEEEEECCCEEEEEECCCCCCCCCCC HDPLAHIFQLDLEQGDTVPLGQFDMVLVFNYLHRPLIPWIKDSVLPGGLVVYETFTEAQA CCHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCEEEEEEHHHHHH SIGRPKNPAFLLGKNELRERFTDWEQVYYREETPATPAGSGAYKATIICRKPLD HCCCCCCCEEEECCHHHHHHHCCHHHHEECCCCCCCCCCCCCEEEEEEEECCCC >Mature Secondary Structure TLTPSSLFNAYPDWFTRATPLRVLDLACGSGRNGVWFLERGHHVTFVDLDTSALPPEIK CCCHHHHHHCCCHHHCCCCCCEEEEEECCCCCCCEEEEECCCEEEEEECCCCCCCCCCC HDPLAHIFQLDLEQGDTVPLGQFDMVLVFNYLHRPLIPWIKDSVLPGGLVVYETFTEAQA CCHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCEEEEEEHHHHHH SIGRPKNPAFLLGKNELRERFTDWEQVYYREETPATPAGSGAYKATIICRKPLD HCCCCCCCEEEECCHHHHHHHCCHHHHEECCCCCCCCCCCCCEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA