| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is 119773746
Identifier: 119773746
GI number: 119773746
Start: 761846
End: 762133
Strand: Reverse
Name: 119773746
Synonym: Sama_0608
Alternate gene names: NA
Gene position: 762133-761846 (Counterclockwise)
Preceding gene: 119773747
Following gene: 119773744
Centisome position: 17.7
GC content: 55.21
Gene sequence:
>288_bases ATGTTTCCTTACCCAGACCAATACCGTAATGCCATCCCGCCGCTGATGACAGGCTTCATTGTGCTTTGGGCACTTGTGGG ACGAGCCATCGCAGGCCTGGGCAGCCCGGTCTTTTATTATCCCTTACTGGCCATGTACCCACTCATTCTGGCTGCCCACG TCTGGCTTATTTGGCATGCACGGGGAATGCGGCGTCTCGATCAGGGGTTTTATGCGCTGGTGCACTGCACCCTGGCCTTT GTGGTGTGGACCTTTGCCATCATGCACTTAAAAGATGCCGGTCTGTAG
Upstream 100 bases:
>100_bases ACTGGGAACAAGTGTATTATCGTGAGGAAACACCCGCGACTCCCGCTGGCAGCGGCGCCTATAAAGCCACGATAATCTGC CGTAAACCTCTGGATTAACT
Downstream 100 bases:
>100_bases CAGAAATAAAAGCGGCACCAAGAAGATTCAAGGTGCCGGCTTTGGCGGAAAGGGAGATTTAGTCGTCCTTTTGGTCGAGC AAACATGATTCCTCGGACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 95; Mature: 95
Protein sequence:
>95_residues MFPYPDQYRNAIPPLMTGFIVLWALVGRAIAGLGSPVFYYPLLAMYPLILAAHVWLIWHARGMRRLDQGFYALVHCTLAF VVWTFAIMHLKDAGL
Sequences:
>Translated_95_residues MFPYPDQYRNAIPPLMTGFIVLWALVGRAIAGLGSPVFYYPLLAMYPLILAAHVWLIWHARGMRRLDQGFYALVHCTLAF VVWTFAIMHLKDAGL >Mature_95_residues MFPYPDQYRNAIPPLMTGFIVLWALVGRAIAGLGSPVFYYPLLAMYPLILAAHVWLIWHARGMRRLDQGFYALVHCTLAF VVWTFAIMHLKDAGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10837; Mature: 10837
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFPYPDQYRNAIPPLMTGFIVLWALVGRAIAGLGSPVFYYPLLAMYPLILAAHVWLIWHA CCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH RGMRRLDQGFYALVHCTLAFVVWTFAIMHLKDAGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFPYPDQYRNAIPPLMTGFIVLWALVGRAIAGLGSPVFYYPLLAMYPLILAAHVWLIWHA CCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH RGMRRLDQGFYALVHCTLAFVVWTFAIMHLKDAGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA