Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
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Accession | NC_008700 |
Length | 4,306,142 |
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The map label for this gene is 119773697
Identifier: 119773697
GI number: 119773697
Start: 694555
End: 695007
Strand: Reverse
Name: 119773697
Synonym: Sama_0559
Alternate gene names: NA
Gene position: 695007-694555 (Counterclockwise)
Preceding gene: 119773698
Following gene: 119773695
Centisome position: 16.14
GC content: 53.86
Gene sequence:
>453_bases GTGCAAGAAAATCCCGGGGCCTTCTATAACGGCGTGTACAGCTTTATCACGGATCCCAAAAATCAGGGCGTTCAACCACG GCGAATGCCTGTATTGGATATCCCATTGGCAATCGACAACACTGCCGTGGCCGGCGAGCCCATAAAAGTCGTACTCGGTG CCATTGTCGATGGAAAGGGGCCTGCCACACTGACGGACGTCAGCCTGCAATATGGCTACGGACAGGAATGTTTACCCGTT AGCCCAAGCGTCTTCCAGTACTGCCCCGTTTCTCAGAAATTCGCCGACAGTAACTGGCAATCCGCTGAAGTGGCTCAGGA AAATGGTCAGTGGGTAGCGACCATCCCCAATGCAGCGGCAGCCGGAAACTACGTACACCTGAAGCTGACCATGACAGATG AAGGTAACAGTCGTGCCGAGCAGTTGATGATGCGCGCCTATCTGCTGAAGTAA
Upstream 100 bases:
>100_bases AGCCACATTGCCATCCGCGACACGAATCTGTTGCAATTTGGGTTCTACACCTATGGCGACGCCAATGGCCAAGATGCCGC CTCTGGGATGAACAAAAGCG
Downstream 100 bases:
>100_bases TCGCTCGCGTTAAAACCTGCCGAGCCGCACTGCTGAACCCAGTGCGGCTCTTTTGTGGGCGTTTGCTGCTGAATCGTCAG GAAATAGGTTGGAATTTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MQENPGAFYNGVYSFITDPKNQGVQPRRMPVLDIPLAIDNTAVAGEPIKVVLGAIVDGKGPATLTDVSLQYGYGQECLPV SPSVFQYCPVSQKFADSNWQSAEVAQENGQWVATIPNAAAAGNYVHLKLTMTDEGNSRAEQLMMRAYLLK
Sequences:
>Translated_150_residues MQENPGAFYNGVYSFITDPKNQGVQPRRMPVLDIPLAIDNTAVAGEPIKVVLGAIVDGKGPATLTDVSLQYGYGQECLPV SPSVFQYCPVSQKFADSNWQSAEVAQENGQWVATIPNAAAAGNYVHLKLTMTDEGNSRAEQLMMRAYLLK >Mature_150_residues MQENPGAFYNGVYSFITDPKNQGVQPRRMPVLDIPLAIDNTAVAGEPIKVVLGAIVDGKGPATLTDVSLQYGYGQECLPV SPSVFQYCPVSQKFADSNWQSAEVAQENGQWVATIPNAAAAGNYVHLKLTMTDEGNSRAEQLMMRAYLLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16267; Mature: 16267
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQENPGAFYNGVYSFITDPKNQGVQPRRMPVLDIPLAIDNTAVAGEPIKVVLGAIVDGKG CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEECCEEECCCCCCCCCHHEEEEEHCCCCC PATLTDVSLQYGYGQECLPVSPSVFQYCPVSQKFADSNWQSAEVAQENGQWVATIPNAAA CCEEEEEEEECCCCCCCCCCCCCHHHHCCCCHHHCCCCCCCCHHHHCCCCEEEECCCCCC AGNYVHLKLTMTDEGNSRAEQLMMRAYLLK CCCEEEEEEEEECCCCHHHHHHHHHHHHCC >Mature Secondary Structure MQENPGAFYNGVYSFITDPKNQGVQPRRMPVLDIPLAIDNTAVAGEPIKVVLGAIVDGKG CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEECCEEECCCCCCCCCHHEEEEEHCCCCC PATLTDVSLQYGYGQECLPVSPSVFQYCPVSQKFADSNWQSAEVAQENGQWVATIPNAAA CCEEEEEEEECCCCCCCCCCCCCHHHHCCCCHHHCCCCCCCCHHHHCCCCEEEECCCCCC AGNYVHLKLTMTDEGNSRAEQLMMRAYLLK CCCEEEEEEEEECCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA