The gene/protein map for NC_008700 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119773697

Identifier: 119773697

GI number: 119773697

Start: 694555

End: 695007

Strand: Reverse

Name: 119773697

Synonym: Sama_0559

Alternate gene names: NA

Gene position: 695007-694555 (Counterclockwise)

Preceding gene: 119773698

Following gene: 119773695

Centisome position: 16.14

GC content: 53.86

Gene sequence:

>453_bases
GTGCAAGAAAATCCCGGGGCCTTCTATAACGGCGTGTACAGCTTTATCACGGATCCCAAAAATCAGGGCGTTCAACCACG
GCGAATGCCTGTATTGGATATCCCATTGGCAATCGACAACACTGCCGTGGCCGGCGAGCCCATAAAAGTCGTACTCGGTG
CCATTGTCGATGGAAAGGGGCCTGCCACACTGACGGACGTCAGCCTGCAATATGGCTACGGACAGGAATGTTTACCCGTT
AGCCCAAGCGTCTTCCAGTACTGCCCCGTTTCTCAGAAATTCGCCGACAGTAACTGGCAATCCGCTGAAGTGGCTCAGGA
AAATGGTCAGTGGGTAGCGACCATCCCCAATGCAGCGGCAGCCGGAAACTACGTACACCTGAAGCTGACCATGACAGATG
AAGGTAACAGTCGTGCCGAGCAGTTGATGATGCGCGCCTATCTGCTGAAGTAA

Upstream 100 bases:

>100_bases
AGCCACATTGCCATCCGCGACACGAATCTGTTGCAATTTGGGTTCTACACCTATGGCGACGCCAATGGCCAAGATGCCGC
CTCTGGGATGAACAAAAGCG

Downstream 100 bases:

>100_bases
TCGCTCGCGTTAAAACCTGCCGAGCCGCACTGCTGAACCCAGTGCGGCTCTTTTGTGGGCGTTTGCTGCTGAATCGTCAG
GAAATAGGTTGGAATTTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MQENPGAFYNGVYSFITDPKNQGVQPRRMPVLDIPLAIDNTAVAGEPIKVVLGAIVDGKGPATLTDVSLQYGYGQECLPV
SPSVFQYCPVSQKFADSNWQSAEVAQENGQWVATIPNAAAAGNYVHLKLTMTDEGNSRAEQLMMRAYLLK

Sequences:

>Translated_150_residues
MQENPGAFYNGVYSFITDPKNQGVQPRRMPVLDIPLAIDNTAVAGEPIKVVLGAIVDGKGPATLTDVSLQYGYGQECLPV
SPSVFQYCPVSQKFADSNWQSAEVAQENGQWVATIPNAAAAGNYVHLKLTMTDEGNSRAEQLMMRAYLLK
>Mature_150_residues
MQENPGAFYNGVYSFITDPKNQGVQPRRMPVLDIPLAIDNTAVAGEPIKVVLGAIVDGKGPATLTDVSLQYGYGQECLPV
SPSVFQYCPVSQKFADSNWQSAEVAQENGQWVATIPNAAAAGNYVHLKLTMTDEGNSRAEQLMMRAYLLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16267; Mature: 16267

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQENPGAFYNGVYSFITDPKNQGVQPRRMPVLDIPLAIDNTAVAGEPIKVVLGAIVDGKG
CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEECCEEECCCCCCCCCHHEEEEEHCCCCC
PATLTDVSLQYGYGQECLPVSPSVFQYCPVSQKFADSNWQSAEVAQENGQWVATIPNAAA
CCEEEEEEEECCCCCCCCCCCCCHHHHCCCCHHHCCCCCCCCHHHHCCCCEEEECCCCCC
AGNYVHLKLTMTDEGNSRAEQLMMRAYLLK
CCCEEEEEEEEECCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MQENPGAFYNGVYSFITDPKNQGVQPRRMPVLDIPLAIDNTAVAGEPIKVVLGAIVDGKG
CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEECCEEECCCCCCCCCHHEEEEEHCCCCC
PATLTDVSLQYGYGQECLPVSPSVFQYCPVSQKFADSNWQSAEVAQENGQWVATIPNAAA
CCEEEEEEEECCCCCCCCCCCCCHHHHCCCCHHHCCCCCCCCHHHHCCCCEEEECCCCCC
AGNYVHLKLTMTDEGNSRAEQLMMRAYLLK
CCCEEEEEEEEECCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA