| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
Click here to switch to the map view.
The map label for this gene is phoA [H]
Identifier: 119773642
GI number: 119773642
Start: 615538
End: 617202
Strand: Reverse
Name: phoA [H]
Synonym: Sama_0502
Alternate gene names: 119773642
Gene position: 617202-615538 (Counterclockwise)
Preceding gene: 119773643
Following gene: 119773640
Centisome position: 14.33
GC content: 56.34
Gene sequence:
>1665_bases ATGAAACATAAAAGCCTGCTGGCAGTAGCCATCGCAGCCGCACTGATGAGCGGTTGCAACGACGACAAAACGGTTGAAGT GATCAAGGAAGTGGAAGTCATCAAGGAAGTGGCTCCCGAGGAAATCACCTCGGTGAAAAACGTCATCCTGATGATCGGCG ATGGTATGGGTGCCCAGCAGGTTGGCCTACTCGAAGAATATGCCCGCCGCGCTCCGCACTCCACCTACAACAGCAAAGGG AACCAAACTGCCCTCAAGCGTTTGGGTGATGCCGGCCAGATGGGTCTGTCGCTCAACGGCCCCGATGGCAGCCTGGTAGT GGATTCAGCCTGCTCAGCCAGCCAGTTGGCTACCGGCAAGGCCGCGGGTTCAGAGATGATTGGTTTGGATGCTCAGGGCT ATGTAGTTGAAACCATCCTTGAGAAGGCAAAAGCCAAAGGCAAGGCAACCGGTTTGGTATCCGATACCCGGCTGACTCAC GCAACACCCGCCGCCTTTGCCGCCCACCAGCCACATCGCAGCTATGAATCAGCCATTGCCGCCGAGCTTATCGACAAGGC CGTGGTGGACGTCATGCTCTCCGGTGGTGCCCGTGAATTTATTCCTCAGGATGCCAGCAGCAACAATGCGGTCAAAGCCG AACTGGCCGCCCTGGGCGCCGTGTCGTCTGTGGTAAAAAAATCCAAGCGTAAAGACGACCGCAACCTGGTGAAAGAAGCC AAGGAAGCCAAGGGCTACCAGCTGGCGTTCGACAAGGCACAGCTCAATGCCGCCGACGGTGACAAGCTGCTGGGTCTGTT TGCCAACTCTGGCATGATGGATGCCATTGCCTACAAGGCCTGTCAGGAAGCCGGGGATTGCAAAGAGCCTTCGCTGCGTG AAATGACTCTCAAAGCGCTGGATATTCTGTCCAAGGACGAAGACGGCTTCTTCCTGATGATTGAAGGTGGCCAGATTGAC TGGGCCGGCCACATCAACGACGCAGGCTGGATGCTGCACGAACTGCTGCGCTTCGACGAAGCTGTGGATGCAGTATATGA ATGGGTTAAAGACCGCAACGATACCCTGGTGATTGTGACCGCCGACCACGAAACAGGCAGCTTCGGTCTGAGCTACAGCC GCAAAGACCTGCCCGGCGCCCAGAGCCTGCCCGGTGATGGAATGCAGGGCGCCGACTATCAGCCCAACTTCAACTTTGGC AGTCTGGACAAACTGGACCGCCTCTATGCGCAAAGCGGCACCTTCTACAACATGATGGACATGGTCAGCGCCGACTGGGC CTTCGATAACTCCACCGGTGACGAATGGGCCAGTGCCATCAACCACTATAGCGACTTCAAAGTAACACCAGAAGAGGCCG CGCCGGTTGCCCTGCGTGAAGCCAATGAGTATTGGGTCGATGGCCACAGCTATTTATCTGCCACCGTGTTCCCTAAGGTC AATGACTTCAAGGAGTTCTACGTTTACGCAGACGAAGTACACGCCAACCTGATTGGCCGAGCCCTGGCTGCGGATCAAAA CGTGGTTTGGGGTACAGGTACCCACACAGCCGCGCCAGTGCCCGTTTACGCTTTCGGTCCTTACGGTGTAACCAAGCAGT TCTCCACTATGCAGCACCACACCGAAGTGGGTCAGAAAATGATGGCCGCACTGCTGGGTGAATAA
Upstream 100 bases:
>100_bases AAACTGACACAAAACTTTCGTCATTTTGTCATCTGCTCTGGTCAGACTTTCGGGCGTTTAAGTCACGCCCTACATATTAG AAAGTCAAAAGAGATCAAGC
Downstream 100 bases:
>100_bases CCAAGCTCTGTGAGTACAAACACCCCATAAAAAAGCCGCCACTGGGCGGCTTTTTTATTTGGCTCATCAAGGCTGGCTGC AAACATCAGGGACTTGTTGA
Product: alkaline phosphatase
Products: NA
Alternate protein names: Alkaline phosphatase IV; APase IV [H]
Number of amino acids: Translated: 554; Mature: 554
Protein sequence:
>554_residues MKHKSLLAVAIAAALMSGCNDDKTVEVIKEVEVIKEVAPEEITSVKNVILMIGDGMGAQQVGLLEEYARRAPHSTYNSKG NQTALKRLGDAGQMGLSLNGPDGSLVVDSACSASQLATGKAAGSEMIGLDAQGYVVETILEKAKAKGKATGLVSDTRLTH ATPAAFAAHQPHRSYESAIAAELIDKAVVDVMLSGGAREFIPQDASSNNAVKAELAALGAVSSVVKKSKRKDDRNLVKEA KEAKGYQLAFDKAQLNAADGDKLLGLFANSGMMDAIAYKACQEAGDCKEPSLREMTLKALDILSKDEDGFFLMIEGGQID WAGHINDAGWMLHELLRFDEAVDAVYEWVKDRNDTLVIVTADHETGSFGLSYSRKDLPGAQSLPGDGMQGADYQPNFNFG SLDKLDRLYAQSGTFYNMMDMVSADWAFDNSTGDEWASAINHYSDFKVTPEEAAPVALREANEYWVDGHSYLSATVFPKV NDFKEFYVYADEVHANLIGRALAADQNVVWGTGTHTAAPVPVYAFGPYGVTKQFSTMQHHTEVGQKMMAALLGE
Sequences:
>Translated_554_residues MKHKSLLAVAIAAALMSGCNDDKTVEVIKEVEVIKEVAPEEITSVKNVILMIGDGMGAQQVGLLEEYARRAPHSTYNSKG NQTALKRLGDAGQMGLSLNGPDGSLVVDSACSASQLATGKAAGSEMIGLDAQGYVVETILEKAKAKGKATGLVSDTRLTH ATPAAFAAHQPHRSYESAIAAELIDKAVVDVMLSGGAREFIPQDASSNNAVKAELAALGAVSSVVKKSKRKDDRNLVKEA KEAKGYQLAFDKAQLNAADGDKLLGLFANSGMMDAIAYKACQEAGDCKEPSLREMTLKALDILSKDEDGFFLMIEGGQID WAGHINDAGWMLHELLRFDEAVDAVYEWVKDRNDTLVIVTADHETGSFGLSYSRKDLPGAQSLPGDGMQGADYQPNFNFG SLDKLDRLYAQSGTFYNMMDMVSADWAFDNSTGDEWASAINHYSDFKVTPEEAAPVALREANEYWVDGHSYLSATVFPKV NDFKEFYVYADEVHANLIGRALAADQNVVWGTGTHTAAPVPVYAFGPYGVTKQFSTMQHHTEVGQKMMAALLGE >Mature_554_residues MKHKSLLAVAIAAALMSGCNDDKTVEVIKEVEVIKEVAPEEITSVKNVILMIGDGMGAQQVGLLEEYARRAPHSTYNSKG NQTALKRLGDAGQMGLSLNGPDGSLVVDSACSASQLATGKAAGSEMIGLDAQGYVVETILEKAKAKGKATGLVSDTRLTH ATPAAFAAHQPHRSYESAIAAELIDKAVVDVMLSGGAREFIPQDASSNNAVKAELAALGAVSSVVKKSKRKDDRNLVKEA KEAKGYQLAFDKAQLNAADGDKLLGLFANSGMMDAIAYKACQEAGDCKEPSLREMTLKALDILSKDEDGFFLMIEGGQID WAGHINDAGWMLHELLRFDEAVDAVYEWVKDRNDTLVIVTADHETGSFGLSYSRKDLPGAQSLPGDGMQGADYQPNFNFG SLDKLDRLYAQSGTFYNMMDMVSADWAFDNSTGDEWASAINHYSDFKVTPEEAAPVALREANEYWVDGHSYLSATVFPKV NDFKEFYVYADEVHANLIGRALAADQNVVWGTGTHTAAPVPVYAFGPYGVTKQFSTMQHHTEVGQKMMAALLGE
Specific function: Unknown
COG id: COG1785
COG function: function code P; Alkaline phosphatase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alkaline phosphatase family [H]
Homologues:
Organism=Homo sapiens, GI157266292, Length=387, Percent_Identity=30.2325581395349, Blast_Score=119, Evalue=1e-26, Organism=Homo sapiens, GI116734717, Length=350, Percent_Identity=30.2857142857143, Blast_Score=115, Evalue=1e-25, Organism=Homo sapiens, GI157266296, Length=365, Percent_Identity=30.1369863013699, Blast_Score=115, Evalue=1e-25, Organism=Homo sapiens, GI94721246, Length=365, Percent_Identity=29.8630136986301, Blast_Score=114, Evalue=2e-25, Organism=Homo sapiens, GI294660770, Length=346, Percent_Identity=29.4797687861272, Blast_Score=107, Evalue=3e-23, Organism=Homo sapiens, GI294660772, Length=290, Percent_Identity=30.6896551724138, Blast_Score=103, Evalue=5e-22, Organism=Escherichia coli, GI48994877, Length=359, Percent_Identity=34.2618384401114, Blast_Score=132, Evalue=8e-32, Organism=Saccharomyces cerevisiae, GI6320689, Length=350, Percent_Identity=33.4285714285714, Blast_Score=138, Evalue=3e-33, Organism=Drosophila melanogaster, GI24651554, Length=391, Percent_Identity=32.2250639386189, Blast_Score=134, Evalue=1e-31, Organism=Drosophila melanogaster, GI24585213, Length=364, Percent_Identity=32.6923076923077, Blast_Score=134, Evalue=2e-31, Organism=Drosophila melanogaster, GI21355981, Length=393, Percent_Identity=30.0254452926209, Blast_Score=128, Evalue=8e-30, Organism=Drosophila melanogaster, GI24651556, Length=311, Percent_Identity=34.7266881028939, Blast_Score=124, Evalue=2e-28, Organism=Drosophila melanogaster, GI21358067, Length=366, Percent_Identity=30.327868852459, Blast_Score=122, Evalue=7e-28, Organism=Drosophila melanogaster, GI21355151, Length=355, Percent_Identity=31.2676056338028, Blast_Score=120, Evalue=2e-27, Organism=Drosophila melanogaster, GI19921912, Length=404, Percent_Identity=29.7029702970297, Blast_Score=116, Evalue=3e-26, Organism=Drosophila melanogaster, GI18859923, Length=395, Percent_Identity=30.379746835443, Blast_Score=112, Evalue=5e-25, Organism=Drosophila melanogaster, GI24657827, Length=356, Percent_Identity=31.4606741573034, Blast_Score=111, Evalue=1e-24, Organism=Drosophila melanogaster, GI21355149, Length=372, Percent_Identity=29.5698924731183, Blast_Score=108, Evalue=7e-24, Organism=Drosophila melanogaster, GI85725200, Length=388, Percent_Identity=29.1237113402062, Blast_Score=105, Evalue=7e-23, Organism=Drosophila melanogaster, GI85815833, Length=388, Percent_Identity=29.1237113402062, Blast_Score=105, Evalue=7e-23, Organism=Drosophila melanogaster, GI24657835, Length=352, Percent_Identity=28.9772727272727, Blast_Score=102, Evalue=5e-22, Organism=Drosophila melanogaster, GI24657842, Length=373, Percent_Identity=28.9544235924933, Blast_Score=96, Evalue=6e-20,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR001952 - InterPro: IPR018299 - InterPro: IPR017850 [H]
Pfam domain/function: PF00245 Alk_phosphatase [H]
EC number: =3.1.3.1 [H]
Molecular weight: Translated: 59663; Mature: 59663
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHKSLLAVAIAAALMSGCNDDKTVEVIKEVEVIKEVAPEEITSVKNVILMIGDGMGAQQ CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHEEEEEECCCCHHH VGLLEEYARRAPHSTYNSKGNQTALKRLGDAGQMGLSLNGPDGSLVVDSACSASQLATGK HHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCEEEECCCCCEEEECCCCHHHHCCCC AAGSEMIGLDAQGYVVETILEKAKAKGKATGLVSDTRLTHATPAAFAAHQPHRSYESAIA CCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCEECCCCCCCCCHHHHCCCCCHHHHHHHH AELIDKAVVDVMLSGGAREFIPQDASSNNAVKAELAALGAVSSVVKKSKRKDDRNLVKEA HHHHHHHHHHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH KEAKGYQLAFDKAQLNAADGDKLLGLFANSGMMDAIAYKACQEAGDCKEPSLREMTLKAL HHCCCCEEEECHHHCCCCCCCCEEEEHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHH DILSKDEDGFFLMIEGGQIDWAGHINDAGWMLHELLRFDEAVDAVYEWVKDRNDTLVIVT HHHCCCCCCEEEEEECCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE ADHETGSFGLSYSRKDLPGAQSLPGDGMQGADYQPNFNFGSLDKLDRLYAQSGTFYNMMD ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHH MVSADWAFDNSTGDEWASAINHYSDFKVTPEEAAPVALREANEYWVDGHSYLSATVFPKV HHHCCCCCCCCCHHHHHHHHHHCCCCEECCHHCCCCCEECCCCEEECCCHHEEEEECCCC NDFKEFYVYADEVHANLIGRALAADQNVVWGTGTHTAAPVPVYAFGPYGVTKQFSTMQHH CCHHHHHEEHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHH TEVGQKMMAALLGE HHHHHHHHHHHHCC >Mature Secondary Structure MKHKSLLAVAIAAALMSGCNDDKTVEVIKEVEVIKEVAPEEITSVKNVILMIGDGMGAQQ CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHEEEEEECCCCHHH VGLLEEYARRAPHSTYNSKGNQTALKRLGDAGQMGLSLNGPDGSLVVDSACSASQLATGK HHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCEEEECCCCCEEEECCCCHHHHCCCC AAGSEMIGLDAQGYVVETILEKAKAKGKATGLVSDTRLTHATPAAFAAHQPHRSYESAIA CCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCEECCCCCCCCCHHHHCCCCCHHHHHHHH AELIDKAVVDVMLSGGAREFIPQDASSNNAVKAELAALGAVSSVVKKSKRKDDRNLVKEA HHHHHHHHHHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH KEAKGYQLAFDKAQLNAADGDKLLGLFANSGMMDAIAYKACQEAGDCKEPSLREMTLKAL HHCCCCEEEECHHHCCCCCCCCEEEEHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHH DILSKDEDGFFLMIEGGQIDWAGHINDAGWMLHELLRFDEAVDAVYEWVKDRNDTLVIVT HHHCCCCCCEEEEEECCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE ADHETGSFGLSYSRKDLPGAQSLPGDGMQGADYQPNFNFGSLDKLDRLYAQSGTFYNMMD ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHH MVSADWAFDNSTGDEWASAINHYSDFKVTPEEAAPVALREANEYWVDGHSYLSATVFPKV HHHCCCCCCCCCHHHHHHHHHHCCCCEECCHHCCCCCEECCCCEEECCCHHEEEEECCCC NDFKEFYVYADEVHANLIGRALAADQNVVWGTGTHTAAPVPVYAFGPYGVTKQFSTMQHH CCHHHHHEEHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHH TEVGQKMMAALLGE HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8113174; 9579061; 9384377; 1898729; 2125017; 2105301; 8144469 [H]