Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119773640

Identifier: 119773640

GI number: 119773640

Start: 614413

End: 614751

Strand: Reverse

Name: 119773640

Synonym: Sama_0500

Alternate gene names: NA

Gene position: 614751-614413 (Counterclockwise)

Preceding gene: 119773642

Following gene: 119773632

Centisome position: 14.28

GC content: 51.33

Gene sequence:

>339_bases
ATGTCTAACGAACTGAAAGCACTATTGTGTAATGCCCTGGTATGCCCCGGAAGCGGCCACCTGCTGCTGGGTAAGAAGTG
GCTGGGCTGGCTGATATTGCTACTGACTGCAATCAGTCTTTCTGTGCTGCTGACTGATATTTATCAAGTCGCCAACGACA
TCGCCAACGAGATAATGTCAGGAATACTGCCGATGGACTTGCCGAACATTCTGGCGGAAATCCACAATCGCAGTGTCGCT
ATCGGCTCTGGTGCCCTTTATCTGTTCCTCGGCGTTTGGCTGCTGGGGATTTTGGACAGCCTGAGATGGTTTATTCAGCG
CCGCGCCACAAATCAATGA

Upstream 100 bases:

>100_bases
TATGCTGAGTTTCATCCATTAATCTCCTTTACATCTGCTTTGTTGCCGCCTTGTCAGCGAACCTCAAGCTGTTATGCTGC
CATGGTCCACAGGAGAATCC

Downstream 100 bases:

>100_bases
GTTCAAAATAACAGGGTACCAGCAAGTCAGCCATGTCGCCGTAGTCCGGCTTGCCATCAGGGCAATAGAGCGCAGAGCGG
CAACCGGCGCCCCGTGCCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MSNELKALLCNALVCPGSGHLLLGKKWLGWLILLLTAISLSVLLTDIYQVANDIANEIMSGILPMDLPNILAEIHNRSVA
IGSGALYLFLGVWLLGILDSLRWFIQRRATNQ

Sequences:

>Translated_112_residues
MSNELKALLCNALVCPGSGHLLLGKKWLGWLILLLTAISLSVLLTDIYQVANDIANEIMSGILPMDLPNILAEIHNRSVA
IGSGALYLFLGVWLLGILDSLRWFIQRRATNQ
>Mature_111_residues
SNELKALLCNALVCPGSGHLLLGKKWLGWLILLLTAISLSVLLTDIYQVANDIANEIMSGILPMDLPNILAEIHNRSVAI
GSGALYLFLGVWLLGILDSLRWFIQRRATNQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12312; Mature: 12181

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNELKALLCNALVCPGSGHLLLGKKWLGWLILLLTAISLSVLLTDIYQVANDIANEIMS
CCCHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GILPMDLPNILAEIHNRSVAIGSGALYLFLGVWLLGILDSLRWFIQRRATNQ
CCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SNELKALLCNALVCPGSGHLLLGKKWLGWLILLLTAISLSVLLTDIYQVANDIANEIMS
CCHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GILPMDLPNILAEIHNRSVAIGSGALYLFLGVWLLGILDSLRWFIQRRATNQ
CCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA