Click here to switch to the map view.

The map label for this gene is 119773629

Identifier: 119773629

GI number: 119773629

Start: 599939

End: 600397

Strand: Reverse

Name: 119773629

Synonym: Sama_0489

Alternate gene names: NA

Gene position: 600397-599939 (Counterclockwise)

Preceding gene: 119773630

Following gene: 119773627

Centisome position: 13.94

GC content: 54.9

Gene sequence:

>459_bases
ATGGACAAGCAATATATTCTCTACCCGACAGACTTCTCTGAAAGCTCCACCCACGCCCTGCAACAGGCTCTGGAACTCGC
CCAAAAGAGCCATCAAAAACTACGCCTCTTGCACGTGATAAGTCGTCCGTATGGCGATGACATCACCACAGAGCCACACC
ACGAAGACAACTTCGGCATAGTGGTCGCCAACGCCACAGAGCAGCAGGCCCATTTAGCCGCCTATGCCAAAGAAAGGATC
AATGCTTTACTGGCCAACTTGCCACCGGATCAGGAGATCGAAATCCAAATAGACCAAGGCAATGCCACCAGCCAAATCCT
CGCCGAAGCGGCGCGGGAGGATGTTGCCATGGTCGTCATTGGCTGCCATCATCATGCCCCTTTCACCCACTGGCTGCATC
CCAATGTGGCAGCGCAGGTGGTGAACAAGGCCCACTGCCCCGTATTGGTGGTCAGGTAG

Upstream 100 bases:

>100_bases
GTTACCCTTTATACAAACCGCTGTGTCAAACCTTTAGCCGAGGGAAAAAACACTATAATTTAAAGTGCCCTTCCCCTACA
TTCAGCCAAAGGAGGGAAGT

Downstream 100 bases:

>100_bases
GGCAACCTCTCCAACAAAAAAGGCACCCTGAGGTGCCTTTTGACTATTCCAAAGATTAAAGACTCCGGTAGATGAAGCTC
AGCTCATCAGCGCGATTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Universal Stress Protein; UspA Domain Protein; Universal Stress Protein Family

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MDKQYILYPTDFSESSTHALQQALELAQKSHQKLRLLHVISRPYGDDITTEPHHEDNFGIVVANATEQQAHLAAYAKERI
NALLANLPPDQEIEIQIDQGNATSQILAEAAREDVAMVVIGCHHHAPFTHWLHPNVAAQVVNKAHCPVLVVR

Sequences:

>Translated_152_residues
MDKQYILYPTDFSESSTHALQQALELAQKSHQKLRLLHVISRPYGDDITTEPHHEDNFGIVVANATEQQAHLAAYAKERI
NALLANLPPDQEIEIQIDQGNATSQILAEAAREDVAMVVIGCHHHAPFTHWLHPNVAAQVVNKAHCPVLVVR
>Mature_152_residues
MDKQYILYPTDFSESSTHALQQALELAQKSHQKLRLLHVISRPYGDDITTEPHHEDNFGIVVANATEQQAHLAAYAKERI
NALLANLPPDQEIEIQIDQGNATSQILAEAAREDVAMVVIGCHHHAPFTHWLHPNVAAQVVNKAHCPVLVVR

Specific function: Unknown

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16945; Mature: 16945

Theoretical pI: Translated: 6.21; Mature: 6.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKQYILYPTDFSESSTHALQQALELAQKSHQKLRLLHVISRPYGDDITTEPHHEDNFGI
CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEE
VVANATEQQAHLAAYAKERINALLANLPPDQEIEIQIDQGNATSQILAEAAREDVAMVVI
EEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCEEEEEE
GCHHHAPFTHWLHPNVAAQVVNKAHCPVLVVR
ECCCCCCCCCCCCCHHHHHHHHCCCCCEEEEC
>Mature Secondary Structure
MDKQYILYPTDFSESSTHALQQALELAQKSHQKLRLLHVISRPYGDDITTEPHHEDNFGI
CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEE
VVANATEQQAHLAAYAKERINALLANLPPDQEIEIQIDQGNATSQILAEAAREDVAMVVI
EEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCEEEEEE
GCHHHAPFTHWLHPNVAAQVVNKAHCPVLVVR
ECCCCCCCCCCCCCHHHHHHHHCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA