Click here to switch to the map view.

The map label for this gene is 119773630

Identifier: 119773630

GI number: 119773630

Start: 600712

End: 602559

Strand: Reverse

Name: 119773630

Synonym: Sama_0490

Alternate gene names: NA

Gene position: 602559-600712 (Counterclockwise)

Preceding gene: 119773631

Following gene: 119773629

Centisome position: 13.99

GC content: 54.76

Gene sequence:

>1848_bases
ATGGAATTCAATCAGGGAACACTCGACGAGCTGATGCTAAAGGCCCAACAGGACCTCAGCAGCGACCAGCAAAGCTACAA
ACGTAAACTCAACCTCTATGTCTGGATGGCCTACGGCGTCATCCTGTTATTGCTGCTGCTTTTTGTCGGCCTGGTGGCAG
GCACTGTGGGACTGGCGTTCACAAGCTCTGTATTCCTGGTGTTATTACTCAAGAAAAAGCTGATTATTCCGCTGCTGATT
ATCGGCTGGATGCTGGGAAGAGCACTCTTTCTCGGGGCCGGTAAACCCGAGGGATATAGGCTCAGACGCGCCGAGGCTCC
CCTGCTGTTTGGGCTGGTCAATGAGCTGACCAAAAGCCTAAAGACGCCCAGAGTGCACAACATCATTGTCACGCCGGAAT
TTAACGCCGCCATGGCGCAAACGCCCCGCTGGTTTGTGGGCGGCCCCACCGAGAACACGCTTATAATAGGGCTTGAGCTG
CTGATGTCACTGTCCAAAGAAGAGCTCAAGGCGGTATTGGCCCACGAGCTTGGGCATCTGAGCGGCGACCACGCCAAATT
CAACGGCAAGATTTACCGGGCCCGCGCCATGTGGGAGCAAATGATGCACAGCTTCGAAAGCTCCGGCTCCCTGGTTACCT
ACCCCATGCGCAAGTTTTTCAGCTGGTATGCGCCGCGCTTTTCGGCCTATTCATTCGCACTGGCCAGACTCAACGAGTAC
GAAGCCGATTTGTCTGCCGCCAAGCAGACCTCGGCAGCCACTTTTCAGTCGGCATTGGTCAAAACCTCACTGCTGGCCGA
AATCACAGATGAAGATTTCTGGCCACAATATTACCGCCGTGCCTATGAGCAACCCGCCCCTGATACCCTGCCCTATACCG
CCTTCAAGCAGTTTATAGATGCAGGTGAATTTGGCGACCTGCCGCTGCGACTTGCAAAGGTGATGGCCGAACGCACCTCG
CCCCACAATACCCACCCCTGCACCAAAGACAGAGTAGAAGCGCTGGGCGCATTCGATGAAGACGTACTGAAACTCAGGGA
AAACAATGCCTGGCAGTTGCTCGGTAAGTCGGCCCATAAGATCATTAAAGAATTCAATGATAACTGGCTGATGTATAACG
GCCAGGAGTGGCAATTCCAGTACCAGCTGGCACAGGAACAATTGGCCAGACTCAAGGAACTTGAGCCGATGGACCCCAAT
CAGTTATCGCTGGATCAAAAAGAGGAACTGGCGTTCCTTTTGGATAAGTTCCGGCGAGACCCCGAACGGGTCGTGGCACT
CTACGACGGCATCATGGCATCCAAACCCCATGATCTCGACACGGCTTTGCGTTTGGCACAACTCTACGCCAAAGCAGGCA
ATCCACGTTGTCTGCCACTGTTCCGGACCTGCCTTGCCAAGGATGAACTGGTTAACGATGCCTGCATGGGCGCCTATGGC
TACTACCTGCATCAGGGCGACGGCAATCAGGCCAACGAGTGGCTGGATAAACTGGTTGCCCACGGTGAGATAGCCGAGCG
CGCCCGGCAGGAACGCATCACCGTCGGCGCCAAAGACCCCTTGATGGCACCAACCCTGCCCAAAGAGGCCATAGATGCAC
TCGCCGCGCGGCTGATTGCGATAGACAGGGTGGAGGATGTGTGGCTTTGCCAAAAGTCGGTGCAGTACTTCCGTGACAGC
CCTGTGGTAGTGCTTGCCATCAAGGTGAGCGGCTGGACCGGCAAAGACAAGGTGCTGGAACAATGCTTTGGGCAACTCCC
GGCCGATTGGACCAGTTTTATCGTGACCAAGGATATGGACTCGGCGCTGTTTAAAAAGGTGCAAACCAAAGGCACTCAGA
TTATTTAA

Upstream 100 bases:

>100_bases
TACAAGCGGGCTTCCTACCAAGCCACGCGCATAAAAGTGTTGCCAAAGCAGCCACTTAACATCATAGTTGTTTAGGGAAG
ATCAAGATAAAGGCATAGCC

Downstream 100 bases:

>100_bases
AGCCAATGTCCACAAGCACTTTTTGGCGATATACAGAAAAGGTACCCCATGGGTGCCTTTTCTGTTGCGCGCTTTACGCT
GGCGATTACAGCGTAGGATA

Product: Zn-dependent protease with chaperone function

Products: NA

Alternate protein names: M48 Family Peptidase; Zn-Dependent Protease With Chaperone Function; Peptidase Family; Zn-Dependent Protease With Chaperone Function-Like Protein

Number of amino acids: Translated: 615; Mature: 615

Protein sequence:

>615_residues
MEFNQGTLDELMLKAQQDLSSDQQSYKRKLNLYVWMAYGVILLLLLLFVGLVAGTVGLAFTSSVFLVLLLKKKLIIPLLI
IGWMLGRALFLGAGKPEGYRLRRAEAPLLFGLVNELTKSLKTPRVHNIIVTPEFNAAMAQTPRWFVGGPTENTLIIGLEL
LMSLSKEELKAVLAHELGHLSGDHAKFNGKIYRARAMWEQMMHSFESSGSLVTYPMRKFFSWYAPRFSAYSFALARLNEY
EADLSAAKQTSAATFQSALVKTSLLAEITDEDFWPQYYRRAYEQPAPDTLPYTAFKQFIDAGEFGDLPLRLAKVMAERTS
PHNTHPCTKDRVEALGAFDEDVLKLRENNAWQLLGKSAHKIIKEFNDNWLMYNGQEWQFQYQLAQEQLARLKELEPMDPN
QLSLDQKEELAFLLDKFRRDPERVVALYDGIMASKPHDLDTALRLAQLYAKAGNPRCLPLFRTCLAKDELVNDACMGAYG
YYLHQGDGNQANEWLDKLVAHGEIAERARQERITVGAKDPLMAPTLPKEAIDALAARLIAIDRVEDVWLCQKSVQYFRDS
PVVVLAIKVSGWTGKDKVLEQCFGQLPADWTSFIVTKDMDSALFKKVQTKGTQII

Sequences:

>Translated_615_residues
MEFNQGTLDELMLKAQQDLSSDQQSYKRKLNLYVWMAYGVILLLLLLFVGLVAGTVGLAFTSSVFLVLLLKKKLIIPLLI
IGWMLGRALFLGAGKPEGYRLRRAEAPLLFGLVNELTKSLKTPRVHNIIVTPEFNAAMAQTPRWFVGGPTENTLIIGLEL
LMSLSKEELKAVLAHELGHLSGDHAKFNGKIYRARAMWEQMMHSFESSGSLVTYPMRKFFSWYAPRFSAYSFALARLNEY
EADLSAAKQTSAATFQSALVKTSLLAEITDEDFWPQYYRRAYEQPAPDTLPYTAFKQFIDAGEFGDLPLRLAKVMAERTS
PHNTHPCTKDRVEALGAFDEDVLKLRENNAWQLLGKSAHKIIKEFNDNWLMYNGQEWQFQYQLAQEQLARLKELEPMDPN
QLSLDQKEELAFLLDKFRRDPERVVALYDGIMASKPHDLDTALRLAQLYAKAGNPRCLPLFRTCLAKDELVNDACMGAYG
YYLHQGDGNQANEWLDKLVAHGEIAERARQERITVGAKDPLMAPTLPKEAIDALAARLIAIDRVEDVWLCQKSVQYFRDS
PVVVLAIKVSGWTGKDKVLEQCFGQLPADWTSFIVTKDMDSALFKKVQTKGTQII
>Mature_615_residues
MEFNQGTLDELMLKAQQDLSSDQQSYKRKLNLYVWMAYGVILLLLLLFVGLVAGTVGLAFTSSVFLVLLLKKKLIIPLLI
IGWMLGRALFLGAGKPEGYRLRRAEAPLLFGLVNELTKSLKTPRVHNIIVTPEFNAAMAQTPRWFVGGPTENTLIIGLEL
LMSLSKEELKAVLAHELGHLSGDHAKFNGKIYRARAMWEQMMHSFESSGSLVTYPMRKFFSWYAPRFSAYSFALARLNEY
EADLSAAKQTSAATFQSALVKTSLLAEITDEDFWPQYYRRAYEQPAPDTLPYTAFKQFIDAGEFGDLPLRLAKVMAERTS
PHNTHPCTKDRVEALGAFDEDVLKLRENNAWQLLGKSAHKIIKEFNDNWLMYNGQEWQFQYQLAQEQLARLKELEPMDPN
QLSLDQKEELAFLLDKFRRDPERVVALYDGIMASKPHDLDTALRLAQLYAKAGNPRCLPLFRTCLAKDELVNDACMGAYG
YYLHQGDGNQANEWLDKLVAHGEIAERARQERITVGAKDPLMAPTLPKEAIDALAARLIAIDRVEDVWLCQKSVQYFRDS
PVVVLAIKVSGWTGKDKVLEQCFGQLPADWTSFIVTKDMDSALFKKVQTKGTQII

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69622; Mature: 69622

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFNQGTLDELMLKAQQDLSSDQQSYKRKLNLYVWMAYGVILLLLLLFVGLVAGTVGLAF
CCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSSVFLVLLLKKKLIIPLLIIGWMLGRALFLGAGKPEGYRLRRAEAPLLFGLVNELTKSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHCCCHHHHHHHHHHHHH
KTPRVHNIIVTPEFNAAMAQTPRWFVGGPTENTLIIGLELLMSLSKEELKAVLAHELGHL
CCCCCCEEEECCCCCHHHHCCCCEEECCCCCCEEEHHHHHHHHHCHHHHHHHHHHHHHCC
SGDHAKFNGKIYRARAMWEQMMHSFESSGSLVTYPMRKFFSWYAPRFSAYSFALARLNEY
CCCCEEECCEEHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHH
EADLSAAKQTSAATFQSALVKTSLLAEITDEDFWPQYYRRAYEQPAPDTLPYTAFKQFID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHC
AGEFGDLPLRLAKVMAERTSPHNTHPCTKDRVEALGAFDEDVLKLRENNAWQLLGKSAHK
CCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHH
IIKEFNDNWLMYNGQEWQFQYQLAQEQLARLKELEPMDPNQLSLDQKEELAFLLDKFRRD
HHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCC
PERVVALYDGIMASKPHDLDTALRLAQLYAKAGNPRCLPLFRTCLAKDELVNDACMGAYG
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
YYLHQGDGNQANEWLDKLVAHGEIAERARQERITVGAKDPLMAPTLPKEAIDALAARLIA
HEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHH
IDRVEDVWLCQKSVQYFRDSPVVVLAIKVSGWTGKDKVLEQCFGQLPADWTSFIVTKDMD
HHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHCCCHH
SALFKKVQTKGTQII
HHHHHHHHHCCCCCC
>Mature Secondary Structure
MEFNQGTLDELMLKAQQDLSSDQQSYKRKLNLYVWMAYGVILLLLLLFVGLVAGTVGLAF
CCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSSVFLVLLLKKKLIIPLLIIGWMLGRALFLGAGKPEGYRLRRAEAPLLFGLVNELTKSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHCCCHHHHHHHHHHHHH
KTPRVHNIIVTPEFNAAMAQTPRWFVGGPTENTLIIGLELLMSLSKEELKAVLAHELGHL
CCCCCCEEEECCCCCHHHHCCCCEEECCCCCCEEEHHHHHHHHHCHHHHHHHHHHHHHCC
SGDHAKFNGKIYRARAMWEQMMHSFESSGSLVTYPMRKFFSWYAPRFSAYSFALARLNEY
CCCCEEECCEEHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHH
EADLSAAKQTSAATFQSALVKTSLLAEITDEDFWPQYYRRAYEQPAPDTLPYTAFKQFID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHC
AGEFGDLPLRLAKVMAERTSPHNTHPCTKDRVEALGAFDEDVLKLRENNAWQLLGKSAHK
CCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHH
IIKEFNDNWLMYNGQEWQFQYQLAQEQLARLKELEPMDPNQLSLDQKEELAFLLDKFRRD
HHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCC
PERVVALYDGIMASKPHDLDTALRLAQLYAKAGNPRCLPLFRTCLAKDELVNDACMGAYG
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
YYLHQGDGNQANEWLDKLVAHGEIAERARQERITVGAKDPLMAPTLPKEAIDALAARLIA
HEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHH
IDRVEDVWLCQKSVQYFRDSPVVVLAIKVSGWTGKDKVLEQCFGQLPADWTSFIVTKDMD
HHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHCCCHH
SALFKKVQTKGTQII
HHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA