The gene/protein map for NC_008700 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is yjgA [C]

Identifier: 119773621

GI number: 119773621

Start: 592271

End: 592819

Strand: Reverse

Name: yjgA [C]

Synonym: Sama_0481

Alternate gene names: 119773621

Gene position: 592819-592271 (Counterclockwise)

Preceding gene: 119773623

Following gene: 119773616

Centisome position: 13.77

GC content: 53.01

Gene sequence:

>549_bases
ATGAACGTCGTTGGCGATCCAGAGAATTTCAAACAGCCCTATGATGATGACGAAAACTATGTCAGCAAGTCATCTTTCAA
GCGGGAATCCCATGCTGCACAGGACCTGGGTAAGCGTCTGCTTGGTCTGAGCAAGAGCCAGCTCGAAAAGCTGGATCTGG
AAGAAGACCTGCTGGATGCCCTGGCTGCAGCCAAAAAAATTAAACCCAACAGTGAGGCCCTGCGCCGTCAGATCCAATTT
ATTGGCAAACTGATGCGTAACCTGGACACCGAGGCCATAGTCGCTTCGCTGGACAAGCTGGCCAACAAAAACAACAACCA
GGCTGCCCGTCAGCATGTGCTTGAAAAAATTCGCGATCGTTTGCTTGCCGACGGTGACAGCGAGATCCAGGCACTGGTAG
AGGAGCACCCAACCTTTGACCGCCAGAAACTGCGTCAGATGGTGCGTGCAACCGCCAAGGAAGTCGGCAAAGACGCGGAA
AAAGGTCTTGAGTCCAAGGCTGCCAAGGAGCTCCTCAAGTACTTGCGGGACAATACTCCCGAGTCCTGA

Upstream 100 bases:

>100_bases
CAAATGTGCTCCCTTTGCAGACAAAATCTGCGCCCGAGGCAGCAGTTTCCCCTGCTTAATGGTAAGATTGCCGGATTGCG
TGTAGAGAGGTTTTGAGCGA

Downstream 100 bases:

>100_bases
AGACTGCCACGCCGTCAGACAGATTAGCGCCCCGCAATGCGGGGCGTTTTCTTACCCCTGTTTTGGGGGACTCAGTTGAT
TCACTTCCCGCTGCCTGACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MNVVGDPENFKQPYDDDENYVSKSSFKRESHAAQDLGKRLLGLSKSQLEKLDLEEDLLDALAAAKKIKPNSEALRRQIQF
IGKLMRNLDTEAIVASLDKLANKNNNQAARQHVLEKIRDRLLADGDSEIQALVEEHPTFDRQKLRQMVRATAKEVGKDAE
KGLESKAAKELLKYLRDNTPES

Sequences:

>Translated_182_residues
MNVVGDPENFKQPYDDDENYVSKSSFKRESHAAQDLGKRLLGLSKSQLEKLDLEEDLLDALAAAKKIKPNSEALRRQIQF
IGKLMRNLDTEAIVASLDKLANKNNNQAARQHVLEKIRDRLLADGDSEIQALVEEHPTFDRQKLRQMVRATAKEVGKDAE
KGLESKAAKELLKYLRDNTPES
>Mature_182_residues
MNVVGDPENFKQPYDDDENYVSKSSFKRESHAAQDLGKRLLGLSKSQLEKLDLEEDLLDALAAAKKIKPNSEALRRQIQF
IGKLMRNLDTEAIVASLDKLANKNNNQAARQHVLEKIRDRLLADGDSEIQALVEEHPTFDRQKLRQMVRATAKEVGKDAE
KGLESKAAKELLKYLRDNTPES

Specific function: Unknown

COG id: COG3028

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0307 family [H]

Homologues:

Organism=Escherichia coli, GI1790681, Length=158, Percent_Identity=39.873417721519, Blast_Score=106, Evalue=9e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023153
- InterPro:   IPR006839 [H]

Pfam domain/function: PF04751 DUF615 [H]

EC number: NA

Molecular weight: Translated: 20584; Mature: 20584

Theoretical pI: Translated: 6.82; Mature: 6.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVVGDPENFKQPYDDDENYVSKSSFKRESHAAQDLGKRLLGLSKSQLEKLDLEEDLLDA
CCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHH
LAAAKKIKPNSEALRRQIQFIGKLMRNLDTEAIVASLDKLANKNNNQAARQHVLEKIRDR
HHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
LLADGDSEIQALVEEHPTFDRQKLRQMVRATAKEVGKDAEKGLESKAAKELLKYLRDNTP
HHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC
ES
CC
>Mature Secondary Structure
MNVVGDPENFKQPYDDDENYVSKSSFKRESHAAQDLGKRLLGLSKSQLEKLDLEEDLLDA
CCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHH
LAAAKKIKPNSEALRRQIQFIGKLMRNLDTEAIVASLDKLANKNNNQAARQHVLEKIRDR
HHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
LLADGDSEIQALVEEHPTFDRQKLRQMVRATAKEVGKDAEKGLESKAAKELLKYLRDNTP
HHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC
ES
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA