The gene/protein map for NC_008700 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119773562

Identifier: 119773562

GI number: 119773562

Start: 519998

End: 520576

Strand: Reverse

Name: 119773562

Synonym: Sama_0422

Alternate gene names: NA

Gene position: 520576-519998 (Counterclockwise)

Preceding gene: 119773564

Following gene: 119773561

Centisome position: 12.09

GC content: 54.06

Gene sequence:

>579_bases
ATGAAACTGACCATGCTGACTCCGGCGCTCTATGAAAAGCTGTACCGGGATATCCGCGAATTTCGCACCACCTTCGATTT
ACCAGTGGAAGACACTGCCAGCCTGGATGCCAAAGCCGATACCCTGCACTCTTCATTGATCATTGAAGAACTGACTGAGC
TTGCGGAAGCCGGCTGCAAAGTAGAGCAGGCAGACGCCATAGTGGACAGCGTTTATGTACTCATGGGCCGCGCCGTACAT
CTGGGCGCCAAATCTGCCGATGCCTGCCTGGAAATCAGCTACTTTATCGATGTACTTCTGCATGTTGCCGCCAACCGAGG
CATCAATTTCGAAATCTGCTGGGATGAAGTGCACTCGAGCAACATGAGCAAGGTTTGCCGCACCGAGCAAGAACTGGCCG
ACACCATTGCCCACTACGCCACACAGGGCGTTGACATTGTGGGTAGTCGTCAGGGGGATTTCCTCATTGCCAAGTGCGCA
AAAGACGTTGAGCTGGAGGGCAAAACCGTGCGCCAGGGCAAGGTGCTTAAATCTGTGTACTACCGCCCCGCCAACTTAAG
CGCACTGATCTCTGGCTGA

Upstream 100 bases:

>100_bases
TTCATCTCTACTCTATCCTTGCCTTGCAGCTTTCTTTGCCTCGGGCGAGGCAATTCTTTATCATCCCGAGTCTCACGTAA
TTTTCGCAAAAAGGCGAGCC

Downstream 100 bases:

>100_bases
TATAGCGTTCAACCCCAAAAGCCCCGTCAACGGGGCTTTTTTATTGGTACCGTAGAATTTCTGTTTCAGCTGCTGTCAAT
TCAAGACCCCGCGACTAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MKLTMLTPALYEKLYRDIREFRTTFDLPVEDTASLDAKADTLHSSLIIEELTELAEAGCKVEQADAIVDSVYVLMGRAVH
LGAKSADACLEISYFIDVLLHVAANRGINFEICWDEVHSSNMSKVCRTEQELADTIAHYATQGVDIVGSRQGDFLIAKCA
KDVELEGKTVRQGKVLKSVYYRPANLSALISG

Sequences:

>Translated_192_residues
MKLTMLTPALYEKLYRDIREFRTTFDLPVEDTASLDAKADTLHSSLIIEELTELAEAGCKVEQADAIVDSVYVLMGRAVH
LGAKSADACLEISYFIDVLLHVAANRGINFEICWDEVHSSNMSKVCRTEQELADTIAHYATQGVDIVGSRQGDFLIAKCA
KDVELEGKTVRQGKVLKSVYYRPANLSALISG
>Mature_192_residues
MKLTMLTPALYEKLYRDIREFRTTFDLPVEDTASLDAKADTLHSSLIIEELTELAEAGCKVEQADAIVDSVYVLMGRAVH
LGAKSADACLEISYFIDVLLHVAANRGINFEICWDEVHSSNMSKVCRTEQELADTIAHYATQGVDIVGSRQGDFLIAKCA
KDVELEGKTVRQGKVLKSVYYRPANLSALISG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21188; Mature: 21188

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTMLTPALYEKLYRDIREFRTTFDLPVEDTASLDAKADTLHSSLIIEELTELAEAGCK
CEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
VEQADAIVDSVYVLMGRAVHLGAKSADACLEISYFIDVLLHVAANRGINFEICWDEVHSS
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHCCC
NMSKVCRTEQELADTIAHYATQGVDIVGSRQGDFLIAKCAKDVELEGKTVRQGKVLKSVY
CHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHH
YRPANLSALISG
CCCCCCEEEECC
>Mature Secondary Structure
MKLTMLTPALYEKLYRDIREFRTTFDLPVEDTASLDAKADTLHSSLIIEELTELAEAGCK
CEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
VEQADAIVDSVYVLMGRAVHLGAKSADACLEISYFIDVLLHVAANRGINFEICWDEVHSS
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHCCC
NMSKVCRTEQELADTIAHYATQGVDIVGSRQGDFLIAKCAKDVELEGKTVRQGKVLKSVY
CHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHH
YRPANLSALISG
CCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA