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The map label for this gene is torT [H]

Identifier: 119773561

GI number: 119773561

Start: 518800

End: 519885

Strand: Reverse

Name: torT [H]

Synonym: Sama_0421

Alternate gene names: 119773561

Gene position: 519885-518800 (Counterclockwise)

Preceding gene: 119773562

Following gene: 119773558

Centisome position: 12.07

GC content: 56.81

Gene sequence:

>1086_bases
ATGACTGACACCCAAGGGAACATGAAAATCGTAACCCTGCTTATTGCATTTATTGCCCTGACCGCCTTTGCTGAGGGCCC
CGGCCTGGAGATGCATATCGACGGTAACGCCGGGATTTACCAGGCACCCGAGAAAGCGACCCGCCCATGGCGTATCTGTG
CACTCCTGCCCCATGGCAAGGATCATTACTGGTGGGGGGTTGCCTGGGGATTGTCACAGGAAGCACAGCGGCTGGGGATA
GAGATTGGCATTTATGACGCCGGGGGCTACGACAAGCTGGCCGAACAAAAAAGGCAACTGAAACAGTGTCACCGTCTGAA
AGCCAACGGCTACATCATTGCAGCTATCACCGCCGATGGTCTTTCGGCCGAAGTGGAACTTTTGATGGCCGATGGCATTC
CTGTAATCGATCTGGTCAACGGCATGAACAGTGAGGTGAGCAGCCGCTCACTGGTATCCTTTGTCGATATGGCTACTGCC
GCCGCCAAGTACATGCTGGCAACCGAGCCCAACCGCCCCCTCAATGTAGCCTGGTTTCCCGGCCCCGATGGTGCTGCCTG
GGTAAAAGATGCCGAAACGGGATTGGCTGAAGCCATAGTGGGGGAAGATATCAGGCTGGTGCACGGCGGCTATGGCATGA
CGGAAACCTTTGTTCAGGCAGACTTGGTCCGTGGTTTGGTCAGCCGCATTCAGGCCGAATACATCATCGCCAACGCGGTA
GCGGCTACCGTGGCGGCCAAATATTTCGGTAACCGGGGCAAAACCAAGGTCATAGCCTTTTACTCCAATCCACAGACCAT
AGAGCTGGTCCGGGATGGCACGCTGCAGGCCACAGTCACCGACTCACCGGTACTGCAGGCCAGGGTGTCGGTGGATCTGG
CTGTGCAATGGCTGGAACAGGGCAGCGCCCCGCGACTTGTCAGTCCGGTGATTCAGGTACTGACCAGTGAAAATCTGGCA
GCGGCAGATTTAAGTCTGACACTGCCGCCGGAACATCAGTGGATGATCCATCAGGATCTCTCCCCCATCGGCGGCGCTAC
AGCGCTGCAAAGGCGTAGTCAGCTCCAAGCGCCAAAAACAGACTGA

Upstream 100 bases:

>100_bases
CCCCAAAAGCCCCGTCAACGGGGCTTTTTTATTGGTACCGTAGAATTTCTGTTTCAGCTGCTGTCAATTCAAGACCCCGC
GACTAGGCTTAATCTAAAGG

Downstream 100 bases:

>100_bases
GCCCGGCCCAGTTGTTGTTTAAAAAAGCCTTGAAACAATCGCCCCGTTCACGGCCATAAATGAGCCGTTGTTGATAGGCA
GAAAAGCCCACAAAGGTCAG

Product: TMAO reductase system periplasmic protein TorT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 360

Protein sequence:

>361_residues
MTDTQGNMKIVTLLIAFIALTAFAEGPGLEMHIDGNAGIYQAPEKATRPWRICALLPHGKDHYWWGVAWGLSQEAQRLGI
EIGIYDAGGYDKLAEQKRQLKQCHRLKANGYIIAAITADGLSAEVELLMADGIPVIDLVNGMNSEVSSRSLVSFVDMATA
AAKYMLATEPNRPLNVAWFPGPDGAAWVKDAETGLAEAIVGEDIRLVHGGYGMTETFVQADLVRGLVSRIQAEYIIANAV
AATVAAKYFGNRGKTKVIAFYSNPQTIELVRDGTLQATVTDSPVLQARVSVDLAVQWLEQGSAPRLVSPVIQVLTSENLA
AADLSLTLPPEHQWMIHQDLSPIGGATALQRRSQLQAPKTD

Sequences:

>Translated_361_residues
MTDTQGNMKIVTLLIAFIALTAFAEGPGLEMHIDGNAGIYQAPEKATRPWRICALLPHGKDHYWWGVAWGLSQEAQRLGI
EIGIYDAGGYDKLAEQKRQLKQCHRLKANGYIIAAITADGLSAEVELLMADGIPVIDLVNGMNSEVSSRSLVSFVDMATA
AAKYMLATEPNRPLNVAWFPGPDGAAWVKDAETGLAEAIVGEDIRLVHGGYGMTETFVQADLVRGLVSRIQAEYIIANAV
AATVAAKYFGNRGKTKVIAFYSNPQTIELVRDGTLQATVTDSPVLQARVSVDLAVQWLEQGSAPRLVSPVIQVLTSENLA
AADLSLTLPPEHQWMIHQDLSPIGGATALQRRSQLQAPKTD
>Mature_360_residues
TDTQGNMKIVTLLIAFIALTAFAEGPGLEMHIDGNAGIYQAPEKATRPWRICALLPHGKDHYWWGVAWGLSQEAQRLGIE
IGIYDAGGYDKLAEQKRQLKQCHRLKANGYIIAAITADGLSAEVELLMADGIPVIDLVNGMNSEVSSRSLVSFVDMATAA
AKYMLATEPNRPLNVAWFPGPDGAAWVKDAETGLAEAIVGEDIRLVHGGYGMTETFVQADLVRGLVSRIQAEYIIANAVA
ATVAAKYFGNRGKTKVIAFYSNPQTIELVRDGTLQATVTDSPVLQARVSVDLAVQWLEQGSAPRLVSPVIQVLTSENLAA
ADLSLTLPPEHQWMIHQDLSPIGGATALQRRSQLQAPKTD

Specific function: Upon binding a putative inducer it probably interacts with torS and allows it to play a role in the induction of the torCAD operon for trimethylamine N-oxide reductase [H]

COG id: COG1879

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787228, Length=291, Percent_Identity=30.9278350515464, Blast_Score=138, Evalue=5e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001761
- InterPro:   IPR014301 [H]

Pfam domain/function: PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 38984; Mature: 38853

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDTQGNMKIVTLLIAFIALTAFAEGPGLEMHIDGNAGIYQAPEKATRPWRICALLPHGK
CCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEECCHHCCCCEEEEEECCCCC
DHYWWGVAWGLSQEAQRLGIEIGIYDAGGYDKLAEQKRQLKQCHRLKANGYIIAAITADG
CCEEEEEEECCCHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCC
LSAEVELLMADGIPVIDLVNGMNSEVSSRSLVSFVDMATAAAKYMLATEPNRPLNVAWFP
CCCEEEEEEECCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEEC
GPDGAAWVKDAETGLAEAIVGEDIRLVHGGYGMTETFVQADLVRGLVSRIQAEYIIANAV
CCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AATVAAKYFGNRGKTKVIAFYSNPQTIELVRDGTLQATVTDSPVLQARVSVDLAVQWLEQ
HHHHHHHHHCCCCCEEEEEEECCCCEEEEEECCEEEEEECCCCCEEHHHHHHHHHHHHHC
GSAPRLVSPVIQVLTSENLAAADLSLTLPPEHQWMIHQDLSPIGGATALQRRSQLQAPKT
CCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCC
D
C
>Mature Secondary Structure 
TDTQGNMKIVTLLIAFIALTAFAEGPGLEMHIDGNAGIYQAPEKATRPWRICALLPHGK
CCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEECCHHCCCCEEEEEECCCCC
DHYWWGVAWGLSQEAQRLGIEIGIYDAGGYDKLAEQKRQLKQCHRLKANGYIIAAITADG
CCEEEEEEECCCHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCC
LSAEVELLMADGIPVIDLVNGMNSEVSSRSLVSFVDMATAAAKYMLATEPNRPLNVAWFP
CCCEEEEEEECCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEEC
GPDGAAWVKDAETGLAEAIVGEDIRLVHGGYGMTETFVQADLVRGLVSRIQAEYIIANAV
CCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AATVAAKYFGNRGKTKVIAFYSNPQTIELVRDGTLQATVTDSPVLQARVSVDLAVQWLEQ
HHHHHHHHHCCCCCEEEEEEECCCCEEEEEECCEEEEEECCCCCEEHHHHHHHHHHHHHC
GSAPRLVSPVIQVLTSENLAAADLSLTLPPEHQWMIHQDLSPIGGATALQRRSQLQAPKT
CCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCC
D
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]