| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is 119773526
Identifier: 119773526
GI number: 119773526
Start: 477268
End: 477888
Strand: Reverse
Name: 119773526
Synonym: Sama_0385
Alternate gene names: NA
Gene position: 477888-477268 (Counterclockwise)
Preceding gene: 119773527
Following gene: 119773525
Centisome position: 11.1
GC content: 56.84
Gene sequence:
>621_bases ATGAGCCAGATTAAAGTCAGTTATTTCGATGTTGATGGCGGCCGCGGCGAGCCAATCCGTATCGTACTCCACGCCGCCGG CATCCCGTTTGAGGATTTCCGTTTCGGCTATGGTGAATTTGCCGACGTGCGGAAAACCACGCCACTGGGCCAGGTACCCA CTGTCAACATAGAGGGAGTGCAGTACACCCAGTCGAGTGCTTTACTGCGCTATTTTGGCAAGGCGGCCGACCTTTATCCC CAGGACCCGTTTCAGGCGCTGCTGTGCGATGAAATCATAGATGGCTCTGAAGACCTCACCAATAAACTGGTCGCCAGCTT CGGCCTGCAGGGTGATGCCCTCAAGAGTGCCCGTGAAGCCTTTGTCACCGGTCCCCTGACCCTGTACCTGGGTTGGATGG CACAAAAGCTTGCCGCGCAGGGTAACTACTTCGCCAACGGCAAGCTGACCATAGCGGATCTGAAGGTGTTTATGTTGCTG CGCTGGCTGGGTTCGGGACAGCTTGATCATATTCCGACAGACAGCGTCACGCGTATCGCGCCCTCCCTTCAAGCCTATGC AGAGCGCATCGGTGCCGACCCTGTGGTTAGCTCTTACTATCAGGCCCGCGCGGCCAAATAG
Upstream 100 bases:
>100_bases ACGCTGCAAGGCGATACAAGCCCCCTCTTTGTCGTAAGCCTCAGGGTATAAAAACGACCAGAATCCATATCCAGCAACAT GAACATCTCAGGAGAGCACA
Downstream 100 bases:
>100_bases AACATCCGTAACCTTGCGTGCTCACGGCCTGTTAGCGTTTATCTCAAGGCAGGGTGAGTACTTTGCAGCGGAATTCAGGA TACAAAGAAGCCGGCTTGCG
Product: glutathione S-transferase-like protein
Products: NA
Alternate protein names: Glutathione S-Transferase-Like Protein; Glutathione S-Transferase-Like
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MSQIKVSYFDVDGGRGEPIRIVLHAAGIPFEDFRFGYGEFADVRKTTPLGQVPTVNIEGVQYTQSSALLRYFGKAADLYP QDPFQALLCDEIIDGSEDLTNKLVASFGLQGDALKSAREAFVTGPLTLYLGWMAQKLAAQGNYFANGKLTIADLKVFMLL RWLGSGQLDHIPTDSVTRIAPSLQAYAERIGADPVVSSYYQARAAK
Sequences:
>Translated_206_residues MSQIKVSYFDVDGGRGEPIRIVLHAAGIPFEDFRFGYGEFADVRKTTPLGQVPTVNIEGVQYTQSSALLRYFGKAADLYP QDPFQALLCDEIIDGSEDLTNKLVASFGLQGDALKSAREAFVTGPLTLYLGWMAQKLAAQGNYFANGKLTIADLKVFMLL RWLGSGQLDHIPTDSVTRIAPSLQAYAERIGADPVVSSYYQARAAK >Mature_205_residues SQIKVSYFDVDGGRGEPIRIVLHAAGIPFEDFRFGYGEFADVRKTTPLGQVPTVNIEGVQYTQSSALLRYFGKAADLYPQ DPFQALLCDEIIDGSEDLTNKLVASFGLQGDALKSAREAFVTGPLTLYLGWMAQKLAAQGNYFANGKLTIADLKVFMLLR WLGSGQLDHIPTDSVTRIAPSLQAYAERIGADPVVSSYYQARAAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI24430144, Length=202, Percent_Identity=31.1881188118812, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17540934, Length=209, Percent_Identity=28.7081339712919, Blast_Score=84, Evalue=5e-17, Organism=Caenorhabditis elegans, GI17565374, Length=211, Percent_Identity=28.9099526066351, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17569381, Length=203, Percent_Identity=26.1083743842365, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17537487, Length=214, Percent_Identity=28.5046728971963, Blast_Score=79, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17537491, Length=212, Percent_Identity=31.6037735849057, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17563170, Length=211, Percent_Identity=27.4881516587678, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17537497, Length=213, Percent_Identity=29.5774647887324, Blast_Score=77, Evalue=5e-15, Organism=Caenorhabditis elegans, GI17564840, Length=204, Percent_Identity=27.9411764705882, Blast_Score=76, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17537485, Length=220, Percent_Identity=27.2727272727273, Blast_Score=76, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17533777, Length=212, Percent_Identity=25.9433962264151, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17565768, Length=208, Percent_Identity=25.9615384615385, Blast_Score=74, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17537493, Length=213, Percent_Identity=25.8215962441315, Blast_Score=74, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17533789, Length=213, Percent_Identity=27.6995305164319, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI32565684, Length=211, Percent_Identity=26.5402843601896, Blast_Score=72, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17537489, Length=213, Percent_Identity=25.8215962441315, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17566902, Length=221, Percent_Identity=27.1493212669683, Blast_Score=71, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17541378, Length=210, Percent_Identity=25.7142857142857, Blast_Score=70, Evalue=6e-13, Organism=Caenorhabditis elegans, GI17533783, Length=215, Percent_Identity=27.4418604651163, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI25152187, Length=73, Percent_Identity=45.2054794520548, Blast_Score=69, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17534687, Length=210, Percent_Identity=25.2380952380952, Blast_Score=67, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17533779, Length=211, Percent_Identity=25.1184834123223, Blast_Score=66, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17534685, Length=162, Percent_Identity=30.2469135802469, Blast_Score=65, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22535; Mature: 22404
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQIKVSYFDVDGGRGEPIRIVLHAAGIPFEDFRFGYGEFADVRKTTPLGQVPTVNIEGV CCCEEEEEEECCCCCCCCEEEEEEECCCCHHHHHCCCCCHHHHHCCCCCCCCCEEEECCC QYTQSSALLRYFGKAADLYPQDPFQALLCDEIIDGSEDLTNKLVASFGLQGDALKSAREA EECHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHH FVTGPLTLYLGWMAQKLAAQGNYFANGKLTIADLKVFMLLRWLGSGQLDHIPTDSVTRIA HHCCHHHHHHHHHHHHHHHCCCEEECCEEEHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH PSLQAYAERIGADPVVSSYYQARAAK HHHHHHHHHHCCCHHHHHHHHHHCCC >Mature Secondary Structure SQIKVSYFDVDGGRGEPIRIVLHAAGIPFEDFRFGYGEFADVRKTTPLGQVPTVNIEGV CCEEEEEEECCCCCCCCEEEEEEECCCCHHHHHCCCCCHHHHHCCCCCCCCCEEEECCC QYTQSSALLRYFGKAADLYPQDPFQALLCDEIIDGSEDLTNKLVASFGLQGDALKSAREA EECHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHH FVTGPLTLYLGWMAQKLAAQGNYFANGKLTIADLKVFMLLRWLGSGQLDHIPTDSVTRIA HHCCHHHHHHHHHHHHHHHCCCEEECCEEEHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH PSLQAYAERIGADPVVSSYYQARAAK HHHHHHHHHHCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA