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The map label for this gene is yniC [H]

Identifier: 119773522

GI number: 119773522

Start: 469245

End: 469910

Strand: Reverse

Name: yniC [H]

Synonym: Sama_0381

Alternate gene names: 119773522

Gene position: 469910-469245 (Counterclockwise)

Preceding gene: 119773524

Following gene: 119773512

Centisome position: 10.91

GC content: 57.36

Gene sequence:

>666_bases
ATGTTAACCAACCGCATTGATGCCGTGATTTTTGATATGGACGGCATACTTATCGATTCTGAGCCTGTGTGGCAGCTGGC
CGAATACGAAGTACTCGCTGGACTCGGTCTGCCCATCAAGCCCGAAGACATTCACGACACCGTGGGGCTGCGTATCGATA
TGGTGGTGGACTACTGGTATCGCCGTTATCCCTGGGATAACTATGACAACGCTGCTGTCGCCAAACAGATTGTCGACGGC
GTAGTGGCCCATATCCTCAGCGAAGGCGTGCCAATGAAGGGCGTGATAGAGGCGCTGGATTACTGCAGGCAGAAGGGTCT
TAAGATTGGCCTCGCCACCTCGTCGAGCTGGGCCATTATCGATGCAGTGCTGGATACCCTGAATATCCGCGACTATTTCG
ATGCCATGGAGTCGGCCGAGCACCTCGCGTTTGGCAAACCCCACCCTGAAGTGTACCTCAAGTGCGCCGATGCCCTTGGC
GTACCCGCACGCCACTGTCTGGCGGTGGAAGATTCTTTCAATGGCCTGATTGCCGCCCGCGCCGCGACCATGCAGACCCT
GGCCATTCCCCCCGCCCATGAGCGAGAACAAACCCGCTGGGCCGTGGCCCATGTGAAAGCGGAGGATTTAACCGCGCTGC
CCAAGCTGCTGGCAAATCAGGGCTAA

Upstream 100 bases:

>100_bases
CATTAAAATTCAACACACCATTTTTCAGTTGAAGCAAAATTGCGCTGAAAATTTTTTTTGCCCGAGCGACAATATCGGCT
CATTCAGCCGAGGAGACAGC

Downstream 100 bases:

>100_bases
CATTCTGTAAAAAGACAATAAAAAAGCCGGGGCGCCTTAAACAGCGACCCGGCTTTTTCATGGGGAAAATCCGTTACCAG
ATCTTCACCCGCGCCTCTTC

Product: 2-deoxyglucose-6-phosphatase

Products: glycerol; phosphate

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MLTNRIDAVIFDMDGILIDSEPVWQLAEYEVLAGLGLPIKPEDIHDTVGLRIDMVVDYWYRRYPWDNYDNAAVAKQIVDG
VVAHILSEGVPMKGVIEALDYCRQKGLKIGLATSSSWAIIDAVLDTLNIRDYFDAMESAEHLAFGKPHPEVYLKCADALG
VPARHCLAVEDSFNGLIAARAATMQTLAIPPAHEREQTRWAVAHVKAEDLTALPKLLANQG

Sequences:

>Translated_221_residues
MLTNRIDAVIFDMDGILIDSEPVWQLAEYEVLAGLGLPIKPEDIHDTVGLRIDMVVDYWYRRYPWDNYDNAAVAKQIVDG
VVAHILSEGVPMKGVIEALDYCRQKGLKIGLATSSSWAIIDAVLDTLNIRDYFDAMESAEHLAFGKPHPEVYLKCADALG
VPARHCLAVEDSFNGLIAARAATMQTLAIPPAHEREQTRWAVAHVKAEDLTALPKLLANQG
>Mature_221_residues
MLTNRIDAVIFDMDGILIDSEPVWQLAEYEVLAGLGLPIKPEDIHDTVGLRIDMVVDYWYRRYPWDNYDNAAVAKQIVDG
VVAHILSEGVPMKGVIEALDYCRQKGLKIGLATSSSWAIIDAVLDTLNIRDYFDAMESAEHLAFGKPHPEVYLKCADALG
VPARHCLAVEDSFNGLIAARAATMQTLAIPPAHEREQTRWAVAHVKAEDLTALPKLLANQG

Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates 2-deoxyglucose 6-phosphate and mannose 6- phosphate [H]

COG id: COG0637

COG function: function code R; Predicted phosphatase/phosphohexomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]

Homologues:

Organism=Escherichia coli, GI1788021, Length=211, Percent_Identity=44.0758293838863, Blast_Score=190, Evalue=7e-50,
Organism=Escherichia coli, GI1789046, Length=189, Percent_Identity=32.2751322751323, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1787576, Length=192, Percent_Identity=25.5208333333333, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1789787, Length=204, Percent_Identity=26.9607843137255, Blast_Score=65, Evalue=3e-12,
Organism=Drosophila melanogaster, GI17137324, Length=211, Percent_Identity=27.0142180094787, Blast_Score=74, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006402
- InterPro:   IPR005833
- InterPro:   IPR023198 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: 3.1.3.21

Molecular weight: Translated: 24421; Mature: 24421

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTNRIDAVIFDMDGILIDSEPVWQLAEYEVLAGLGLPIKPEDIHDTVGLRIDMVVDYWY
CCCCCCEEEEEECCCEEECCCCHHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHHHHHHH
RRYPWDNYDNAAVAKQIVDGVVAHILSEGVPMKGVIEALDYCRQKGLKIGLATSSSWAII
HHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHH
DAVLDTLNIRDYFDAMESAEHLAFGKPHPEVYLKCADALGVPARHCLAVEDSFNGLIAAR
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEHHHCCCCHHHEEEEECCCCCHHHHH
AATMQTLAIPPAHEREQTRWAVAHVKAEDLTALPKLLANQG
HHHHHHEECCCCCCHHHHHHHHEECCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLTNRIDAVIFDMDGILIDSEPVWQLAEYEVLAGLGLPIKPEDIHDTVGLRIDMVVDYWY
CCCCCCEEEEEECCCEEECCCCHHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHHHHHHH
RRYPWDNYDNAAVAKQIVDGVVAHILSEGVPMKGVIEALDYCRQKGLKIGLATSSSWAII
HHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHH
DAVLDTLNIRDYFDAMESAEHLAFGKPHPEVYLKCADALGVPARHCLAVEDSFNGLIAAR
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEHHHCCCCHHHEEEEECCCCCHHHHH
AATMQTLAIPPAHEREQTRWAVAHVKAEDLTALPKLLANQG
HHHHHHEECCCCCCHHHHHHHHEECCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: glycerol 1-phosphate; H2O

Specific reaction: glycerol 1-phosphate + H2O = glycerol + phosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]