BacMap

Definition	Shewanella amazonensis SB2B chromosome, complete genome.
Accession	NC_008700
Length	4,306,142

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The map label for this gene is rhlE [H]

Identifier: 119773524

GI number: 119773524

Start: 474348

End: 475742

Strand: Reverse

Name: rhlE [H]

Synonym: Sama_0383

Alternate gene names: 119773524

Gene position: 475742-474348 (Counterclockwise)

Preceding gene: 119773525

Following gene: 119773522

Centisome position: 11.05

GC content: 55.7

Gene sequence:

>1395_bases
ATGTCATTTGCCCGTCTGGGATTAGCTCCCGCCATTACTTCGGCACTTGAGTCGCTGAACTATCAACAGCCCACCGAGAT
CCAGCAAAAGGCGATACCGGTAGCCTTAAGTGGTCGCAATCTGCTGGCCGCAGCTCAAACCGGAACGGGCAAAACCGCAG
CATTTGGACTGCCGCTGATTGAACGCCTAAGCCAGGGCAAGACCGAACGGAAAAAACGGGTACGGGCGGTGATTTTGGCG
CCAACCCGGGAGTTAGTGGTGCAGGTGGCTGACAATCTGAGCGCCTACGCGGCGAACTTGCCGCTGACCGTGCTGGCCAT
GTATGGCGGTGTGGATATGCAGGCCCAAAAGCAGGCGCTGATTGCGGGCGTGGATATTCTGGTGGCGACGCCAGGCAGAC
TCAAAGACATGTACCATCAGCGTGCCGTGTATTTTGAAGAAATCCAGGTGCTGGTGCTGGATGAGGCCGACCGCATGCTG
GATATGGGCTTTATTGAGGTCATTAACGACCTTATCAGCCGTATGCCCACGAACCGCCAGAATCTGCTGTTTTCGGCAAC
TTTATCCCCGCGCATTCGCGAGCTGGCCAAAACCGCGGTGCCGGATCCGGTCGAAATTGCCATTGCCAAGCCCAGCAAAA
AAGAGATTTCCCAGTGGCTGGTGACGGTCGACAAGGACACCAAGTCGGCCCTCCTGAGCCATCTTATCCAAACGGAACAA
TGGCAGCAGGCGCTGATTTTCATTGAAACCAAACATGGCGCGGCCAAGTTGGTCAGCCAGCTGGAAAAGCGTGGCATTCA
CGCCGAAGCCTTTCACAGTGGCCGCAGTCAGGCGGTGCGTGAACAGGTGTTGAGTGAATTTAAAGACGGCAGTTTGCAGT
ATCTGGTAGCCACCGGCGTGGCCGCCCGGGGGATTGATGTCGATAAACTGGAGCGGGTAGTGAACTACGATCTGCCATTC
CCGCCGGATGAATATATTCACCGTATCGGTCGTACCGGCCGCGCGGGCATGACAGGGGAAGCGGTATCTTTACTGTCAAA
AGATGATTTCAAGAATCTGTGTATGATTGAAAGCCGTCTGGGGCATGTGATTGAAAGGCGGGTGATTGAGGGATTTGAGC
CCAAAAAGCCTATCCCTGTGTCTATTCTCGACTATAAGCCCAAATCTCAGCCAAAAGCTCAGCCCAGCTCTGAGCTCAGC
CCTCAACGCAACTCTCAGCCCAGCTCTCAACGAAAGTCGCGCACAGAAAAGCTAAGGGCAAGCGAAGGCGGCACTGCTGC
CAAAAGCCCTTGGGCAGCGGCGCAACGAAAAAAACCTGCAAACCCACGGCATGGAACCAGCGCCGCCAGATCAGGGCCAC
CAAAGGGCAAGGACTCAGGCAAGCCACGGGGCTAA

Upstream 100 bases:

>100_bases
TGGCCCTATCAAACGCCGCTGGCTTTGAATCCCGGATGAATAGCGATAGAATGCGCGCCCATCCTGAGGCTACCGCCCTT
AATACTAAGTTGGATTTTCT

Downstream 100 bases:

>100_bases
TCTAAGAGGCCGCAAGCAGCGGCCTGAGCTGTGGAATCAATGAGTGAGGACGGTCGCTTTGCAAGCGACAGAAGGTCGTG
GGTCTTCAACCCACACCCGA

Product: ATP-dependent RNA helicase RhlE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 464; Mature: 463

Protein sequence:

>464_residues
MSFARLGLAPAITSALESLNYQQPTEIQQKAIPVALSGRNLLAAAQTGTGKTAAFGLPLIERLSQGKTERKKRVRAVILA
PTRELVVQVADNLSAYAANLPLTVLAMYGGVDMQAQKQALIAGVDILVATPGRLKDMYHQRAVYFEEIQVLVLDEADRML
DMGFIEVINDLISRMPTNRQNLLFSATLSPRIRELAKTAVPDPVEIAIAKPSKKEISQWLVTVDKDTKSALLSHLIQTEQ
WQQALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQAVREQVLSEFKDGSLQYLVATGVAARGIDVDKLERVVNYDLPF
PPDEYIHRIGRTGRAGMTGEAVSLLSKDDFKNLCMIESRLGHVIERRVIEGFEPKKPIPVSILDYKPKSQPKAQPSSELS
PQRNSQPSSQRKSRTEKLRASEGGTAAKSPWAAAQRKKPANPRHGTSAARSGPPKGKDSGKPRG

Sequences:

>Translated_464_residues
MSFARLGLAPAITSALESLNYQQPTEIQQKAIPVALSGRNLLAAAQTGTGKTAAFGLPLIERLSQGKTERKKRVRAVILA
PTRELVVQVADNLSAYAANLPLTVLAMYGGVDMQAQKQALIAGVDILVATPGRLKDMYHQRAVYFEEIQVLVLDEADRML
DMGFIEVINDLISRMPTNRQNLLFSATLSPRIRELAKTAVPDPVEIAIAKPSKKEISQWLVTVDKDTKSALLSHLIQTEQ
WQQALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQAVREQVLSEFKDGSLQYLVATGVAARGIDVDKLERVVNYDLPF
PPDEYIHRIGRTGRAGMTGEAVSLLSKDDFKNLCMIESRLGHVIERRVIEGFEPKKPIPVSILDYKPKSQPKAQPSSELS
PQRNSQPSSQRKSRTEKLRASEGGTAAKSPWAAAQRKKPANPRHGTSAARSGPPKGKDSGKPRG
>Mature_463_residues
SFARLGLAPAITSALESLNYQQPTEIQQKAIPVALSGRNLLAAAQTGTGKTAAFGLPLIERLSQGKTERKKRVRAVILAP
TRELVVQVADNLSAYAANLPLTVLAMYGGVDMQAQKQALIAGVDILVATPGRLKDMYHQRAVYFEEIQVLVLDEADRMLD
MGFIEVINDLISRMPTNRQNLLFSATLSPRIRELAKTAVPDPVEIAIAKPSKKEISQWLVTVDKDTKSALLSHLIQTEQW
QQALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQAVREQVLSEFKDGSLQYLVATGVAARGIDVDKLERVVNYDLPFP
PDEYIHRIGRTGRAGMTGEAVSLLSKDDFKNLCMIESRLGHVIERRVIEGFEPKKPIPVSILDYKPKSQPKAQPSSELSP
QRNSQPSSQRKSRTEKLRASEGGTAAKSPWAAAQRKKPANPRHGTSAARSGPPKGKDSGKPRG

Specific function: Acts as an ATP-dependent RNA helicase, able to unwind ds-RNA [H]

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI224593278, Length=361, Percent_Identity=37.1191135734072, Blast_Score=236, Evalue=2e-62,
Organism=Homo sapiens, GI169881239, Length=385, Percent_Identity=37.1428571428571, Blast_Score=236, Evalue=5e-62,
Organism=Homo sapiens, GI13514809, Length=385, Percent_Identity=37.1428571428571, Blast_Score=236, Evalue=5e-62,
Organism=Homo sapiens, GI301171467, Length=385, Percent_Identity=37.4025974025974, Blast_Score=235, Evalue=6e-62,
Organism=Homo sapiens, GI87196351, Length=385, Percent_Identity=37.4025974025974, Blast_Score=235, Evalue=7e-62,
Organism=Homo sapiens, GI301171475, Length=385, Percent_Identity=37.4025974025974, Blast_Score=235, Evalue=8e-62,
Organism=Homo sapiens, GI216548263, Length=357, Percent_Identity=35.8543417366947, Blast_Score=233, Evalue=3e-61,
Organism=Homo sapiens, GI262118318, Length=357, Percent_Identity=35.8543417366947, Blast_Score=233, Evalue=3e-61,
Organism=Homo sapiens, GI262231852, Length=357, Percent_Identity=35.8543417366947, Blast_Score=233, Evalue=4e-61,
Organism=Homo sapiens, GI13518015, Length=357, Percent_Identity=35.8543417366947, Blast_Score=233, Evalue=4e-61,
Organism=Homo sapiens, GI45446747, Length=353, Percent_Identity=37.3937677053824, Blast_Score=231, Evalue=8e-61,
Organism=Homo sapiens, GI45446743, Length=353, Percent_Identity=37.3937677053824, Blast_Score=231, Evalue=8e-61,
Organism=Homo sapiens, GI20149629, Length=363, Percent_Identity=32.7823691460055, Blast_Score=227, Evalue=2e-59,
Organism=Homo sapiens, GI4758138, Length=360, Percent_Identity=36.3888888888889, Blast_Score=226, Evalue=5e-59,
Organism=Homo sapiens, GI41327771, Length=389, Percent_Identity=34.9614395886889, Blast_Score=225, Evalue=6e-59,
Organism=Homo sapiens, GI164664518, Length=382, Percent_Identity=32.4607329842932, Blast_Score=224, Evalue=2e-58,
Organism=Homo sapiens, GI51094101, Length=366, Percent_Identity=34.6994535519126, Blast_Score=221, Evalue=1e-57,
Organism=Homo sapiens, GI164419743, Length=366, Percent_Identity=34.6994535519126, Blast_Score=221, Evalue=1e-57,
Organism=Homo sapiens, GI222352149, Length=363, Percent_Identity=34.9862258953168, Blast_Score=221, Evalue=2e-57,
Organism=Homo sapiens, GI31542656, Length=379, Percent_Identity=36.1477572559367, Blast_Score=219, Evalue=3e-57,
Organism=Homo sapiens, GI148613856, Length=358, Percent_Identity=35.7541899441341, Blast_Score=219, Evalue=4e-57,
Organism=Homo sapiens, GI38201710, Length=358, Percent_Identity=35.7541899441341, Blast_Score=219, Evalue=4e-57,
Organism=Homo sapiens, GI41327773, Length=354, Percent_Identity=35.0282485875706, Blast_Score=219, Evalue=4e-57,
Organism=Homo sapiens, GI7661920, Length=359, Percent_Identity=34.8189415041783, Blast_Score=215, Evalue=6e-56,
Organism=Homo sapiens, GI188035877, Length=355, Percent_Identity=34.6478873239437, Blast_Score=212, Evalue=5e-55,
Organism=Homo sapiens, GI21071032, Length=358, Percent_Identity=36.0335195530726, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI55749865, Length=348, Percent_Identity=33.0459770114943, Blast_Score=208, Evalue=1e-53,
Organism=Homo sapiens, GI41327776, Length=361, Percent_Identity=32.1329639889197, Blast_Score=206, Evalue=4e-53,
Organism=Homo sapiens, GI4503529, Length=368, Percent_Identity=34.2391304347826, Blast_Score=196, Evalue=5e-50,
Organism=Homo sapiens, GI50659095, Length=355, Percent_Identity=36.056338028169, Blast_Score=194, Evalue=2e-49,
Organism=Homo sapiens, GI38327634, Length=337, Percent_Identity=33.8278931750742, Blast_Score=191, Evalue=1e-48,
Organism=Homo sapiens, GI83700235, Length=368, Percent_Identity=33.695652173913, Blast_Score=189, Evalue=6e-48,
Organism=Homo sapiens, GI13129006, Length=354, Percent_Identity=34.180790960452, Blast_Score=189, Evalue=6e-48,
Organism=Homo sapiens, GI13514831, Length=350, Percent_Identity=32, Blast_Score=187, Evalue=2e-47,
Organism=Homo sapiens, GI41327779, Length=361, Percent_Identity=32.409972299169, Blast_Score=185, Evalue=6e-47,
Organism=Homo sapiens, GI21040371, Length=365, Percent_Identity=28.4931506849315, Blast_Score=181, Evalue=1e-45,
Organism=Homo sapiens, GI17505907, Length=405, Percent_Identity=30.8641975308642, Blast_Score=180, Evalue=3e-45,
Organism=Homo sapiens, GI4758112, Length=365, Percent_Identity=28.7671232876712, Blast_Score=179, Evalue=4e-45,
Organism=Homo sapiens, GI18375623, Length=365, Percent_Identity=28.7671232876712, Blast_Score=179, Evalue=4e-45,
Organism=Homo sapiens, GI38569505, Length=340, Percent_Identity=32.9411764705882, Blast_Score=174, Evalue=2e-43,
Organism=Homo sapiens, GI38569503, Length=340, Percent_Identity=32.9411764705882, Blast_Score=173, Evalue=3e-43,
Organism=Homo sapiens, GI8922886, Length=383, Percent_Identity=34.2036553524804, Blast_Score=170, Evalue=2e-42,
Organism=Homo sapiens, GI6005743, Length=383, Percent_Identity=34.2036553524804, Blast_Score=170, Evalue=3e-42,
Organism=Homo sapiens, GI62241022, Length=366, Percent_Identity=34.4262295081967, Blast_Score=161, Evalue=1e-39,
Organism=Homo sapiens, GI164419732, Length=374, Percent_Identity=31.0160427807487, Blast_Score=159, Evalue=7e-39,
Organism=Homo sapiens, GI9506931, Length=399, Percent_Identity=28.8220551378446, Blast_Score=159, Evalue=7e-39,
Organism=Homo sapiens, GI256223453, Length=365, Percent_Identity=29.3150684931507, Blast_Score=157, Evalue=2e-38,
Organism=Homo sapiens, GI62241024, Length=344, Percent_Identity=34.8837209302326, Blast_Score=150, Evalue=3e-36,
Organism=Homo sapiens, GI20336298, Length=226, Percent_Identity=35.8407079646018, Blast_Score=136, Evalue=4e-32,
Organism=Homo sapiens, GI154759257, Length=366, Percent_Identity=28.1420765027322, Blast_Score=135, Evalue=7e-32,
Organism=Homo sapiens, GI256773275, Length=384, Percent_Identity=29.4270833333333, Blast_Score=132, Evalue=5e-31,
Organism=Homo sapiens, GI4826686, Length=335, Percent_Identity=30.1492537313433, Blast_Score=123, Evalue=4e-28,
Organism=Homo sapiens, GI9966805, Length=320, Percent_Identity=28.4375, Blast_Score=120, Evalue=4e-27,
Organism=Escherichia coli, GI1787016, Length=382, Percent_Identity=49.738219895288, Blast_Score=370, Evalue=1e-103,
Organism=Escherichia coli, GI87082221, Length=413, Percent_Identity=38.2566585956416, Blast_Score=265, Evalue=6e-72,
Organism=Escherichia coli, GI1790214, Length=418, Percent_Identity=38.0382775119617, Blast_Score=248, Evalue=6e-67,
Organism=Escherichia coli, GI1787605, Length=362, Percent_Identity=38.121546961326, Blast_Score=222, Evalue=4e-59,
Organism=Escherichia coli, GI1788930, Length=370, Percent_Identity=37.5675675675676, Blast_Score=219, Evalue=2e-58,
Organism=Escherichia coli, GI48994977, Length=367, Percent_Identity=25.3405994550409, Blast_Score=84, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17510559, Length=400, Percent_Identity=35, Blast_Score=235, Evalue=3e-62,
Organism=Caenorhabditis elegans, GI17510307, Length=381, Percent_Identity=37.5328083989501, Blast_Score=229, Evalue=2e-60,
Organism=Caenorhabditis elegans, GI17510309, Length=381, Percent_Identity=37.5328083989501, Blast_Score=229, Evalue=2e-60,
Organism=Caenorhabditis elegans, GI71995514, Length=382, Percent_Identity=37.434554973822, Blast_Score=229, Evalue=2e-60,
Organism=Caenorhabditis elegans, GI17555296, Length=373, Percent_Identity=32.9758713136729, Blast_Score=228, Evalue=5e-60,
Organism=Caenorhabditis elegans, GI71995718, Length=365, Percent_Identity=38.3561643835616, Blast_Score=228, Evalue=7e-60,
Organism=Caenorhabditis elegans, GI32565321, Length=381, Percent_Identity=35.1706036745407, Blast_Score=224, Evalue=1e-58,
Organism=Caenorhabditis elegans, GI71987143, Length=367, Percent_Identity=33.5149863760218, Blast_Score=223, Evalue=2e-58,
Organism=Caenorhabditis elegans, GI115533224, Length=334, Percent_Identity=37.7245508982036, Blast_Score=222, Evalue=4e-58,
Organism=Caenorhabditis elegans, GI86570094, Length=352, Percent_Identity=37.7840909090909, Blast_Score=220, Evalue=1e-57,
Organism=Caenorhabditis elegans, GI71995724, Length=359, Percent_Identity=34.5403899721448, Blast_Score=217, Evalue=1e-56,
Organism=Caenorhabditis elegans, GI17507121, Length=359, Percent_Identity=34.2618384401114, Blast_Score=216, Evalue=2e-56,
Organism=Caenorhabditis elegans, GI17537549, Length=363, Percent_Identity=34.435261707989, Blast_Score=212, Evalue=3e-55,
Organism=Caenorhabditis elegans, GI17552642, Length=441, Percent_Identity=33.3333333333333, Blast_Score=211, Evalue=8e-55,
Organism=Caenorhabditis elegans, GI17507877, Length=376, Percent_Identity=35.1063829787234, Blast_Score=205, Evalue=5e-53,
Organism=Caenorhabditis elegans, GI17509811, Length=356, Percent_Identity=33.4269662921348, Blast_Score=204, Evalue=8e-53,
Organism=Caenorhabditis elegans, GI71999646, Length=365, Percent_Identity=32.6027397260274, Blast_Score=204, Evalue=9e-53,
Organism=Caenorhabditis elegans, GI71999644, Length=365, Percent_Identity=32.6027397260274, Blast_Score=204, Evalue=9e-53,
Organism=Caenorhabditis elegans, GI17552114, Length=366, Percent_Identity=30.6010928961749, Blast_Score=201, Evalue=6e-52,
Organism=Caenorhabditis elegans, GI17507879, Length=372, Percent_Identity=33.6021505376344, Blast_Score=199, Evalue=2e-51,
Organism=Caenorhabditis elegans, GI17507945, Length=350, Percent_Identity=35.4285714285714, Blast_Score=199, Evalue=3e-51,
Organism=Caenorhabditis elegans, GI17507881, Length=373, Percent_Identity=34.3163538873995, Blast_Score=199, Evalue=4e-51,
Organism=Caenorhabditis elegans, GI115532548, Length=371, Percent_Identity=32.0754716981132, Blast_Score=192, Evalue=2e-49,
Organism=Caenorhabditis elegans, GI115532546, Length=371, Percent_Identity=32.0754716981132, Blast_Score=192, Evalue=3e-49,
Organism=Caenorhabditis elegans, GI17505370, Length=337, Percent_Identity=34.1246290801187, Blast_Score=182, Evalue=3e-46,
Organism=Caenorhabditis elegans, GI193208216, Length=384, Percent_Identity=32.03125, Blast_Score=181, Evalue=1e-45,
Organism=Caenorhabditis elegans, GI71982858, Length=365, Percent_Identity=28.7671232876712, Blast_Score=172, Evalue=3e-43,
Organism=Caenorhabditis elegans, GI17508543, Length=422, Percent_Identity=28.1990521327014, Blast_Score=170, Evalue=2e-42,
Organism=Caenorhabditis elegans, GI17536099, Length=382, Percent_Identity=31.9371727748691, Blast_Score=168, Evalue=6e-42,
Organism=Caenorhabditis elegans, GI17536101, Length=382, Percent_Identity=31.9371727748691, Blast_Score=167, Evalue=9e-42,
Organism=Caenorhabditis elegans, GI17536103, Length=382, Percent_Identity=31.9371727748691, Blast_Score=167, Evalue=1e-41,
Organism=Caenorhabditis elegans, GI71990816, Length=377, Percent_Identity=31.0344827586207, Blast_Score=164, Evalue=8e-41,
Organism=Caenorhabditis elegans, GI193206561, Length=383, Percent_Identity=29.7650130548303, Blast_Score=160, Evalue=1e-39,
Organism=Caenorhabditis elegans, GI25148203, Length=418, Percent_Identity=26.7942583732057, Blast_Score=157, Evalue=1e-38,
Organism=Caenorhabditis elegans, GI17507641, Length=400, Percent_Identity=29.75, Blast_Score=153, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI32564046, Length=389, Percent_Identity=29.8200514138817, Blast_Score=147, Evalue=9e-36,
Organism=Caenorhabditis elegans, GI17553716, Length=383, Percent_Identity=27.6762402088773, Blast_Score=146, Evalue=3e-35,
Organism=Caenorhabditis elegans, GI17556951, Length=363, Percent_Identity=28.9256198347107, Blast_Score=137, Evalue=9e-33,
Organism=Caenorhabditis elegans, GI25148205, Length=342, Percent_Identity=26.0233918128655, Blast_Score=116, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI25148291, Length=328, Percent_Identity=28.3536585365854, Blast_Score=116, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI71997889, Length=389, Percent_Identity=27.5064267352185, Blast_Score=114, Evalue=9e-26,
Organism=Caenorhabditis elegans, GI71982862, Length=214, Percent_Identity=27.5700934579439, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17557982, Length=382, Percent_Identity=24.869109947644, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI71987152, Length=95, Percent_Identity=43.1578947368421, Blast_Score=84, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6325138, Length=347, Percent_Identity=40.9221902017291, Blast_Score=243, Evalue=3e-65,
Organism=Saccharomyces cerevisiae, GI6321856, Length=364, Percent_Identity=37.6373626373626, Blast_Score=238, Evalue=1e-63,
Organism=Saccharomyces cerevisiae, GI6324778, Length=347, Percent_Identity=38.6167146974063, Blast_Score=235, Evalue=1e-62,
Organism=Saccharomyces cerevisiae, GI6323021, Length=356, Percent_Identity=37.0786516853933, Blast_Score=228, Evalue=2e-60,
Organism=Saccharomyces cerevisiae, GI6321360, Length=357, Percent_Identity=37.2549019607843, Blast_Score=227, Evalue=4e-60,
Organism=Saccharomyces cerevisiae, GI6324217, Length=353, Percent_Identity=35.9773371104816, Blast_Score=221, Evalue=2e-58,
Organism=Saccharomyces cerevisiae, GI6320041, Length=342, Percent_Identity=33.3333333333333, Blast_Score=214, Evalue=2e-56,
Organism=Saccharomyces cerevisiae, GI6320224, Length=365, Percent_Identity=34.7945205479452, Blast_Score=208, Evalue=1e-54,
Organism=Saccharomyces cerevisiae, GI6320173, Length=420, Percent_Identity=29.2857142857143, Blast_Score=196, Evalue=5e-51,
Organism=Saccharomyces cerevisiae, GI6321963, Length=385, Percent_Identity=34.025974025974, Blast_Score=192, Evalue=1e-49,
Organism=Saccharomyces cerevisiae, GI6320449, Length=354, Percent_Identity=34.180790960452, Blast_Score=189, Evalue=5e-49,
Organism=Saccharomyces cerevisiae, GI6323947, Length=353, Percent_Identity=31.4447592067989, Blast_Score=189, Evalue=1e-48,
Organism=Saccharomyces cerevisiae, GI6324620, Length=381, Percent_Identity=32.2834645669291, Blast_Score=184, Evalue=2e-47,
Organism=Saccharomyces cerevisiae, GI6320119, Length=382, Percent_Identity=29.5811518324607, Blast_Score=180, Evalue=4e-46,
Organism=Saccharomyces cerevisiae, GI6322427, Length=357, Percent_Identity=31.6526610644258, Blast_Score=179, Evalue=1e-45,
Organism=Saccharomyces cerevisiae, GI6322912, Length=332, Percent_Identity=34.6385542168675, Blast_Score=174, Evalue=3e-44,
Organism=Saccharomyces cerevisiae, GI6322323, Length=332, Percent_Identity=34.6385542168675, Blast_Score=174, Evalue=3e-44,
Organism=Saccharomyces cerevisiae, GI6319618, Length=409, Percent_Identity=30.5623471882641, Blast_Score=165, Evalue=1e-41,
Organism=Saccharomyces cerevisiae, GI6321267, Length=360, Percent_Identity=30.8333333333333, Blast_Score=160, Evalue=5e-40,
Organism=Saccharomyces cerevisiae, GI6320400, Length=407, Percent_Identity=30.958230958231, Blast_Score=157, Evalue=5e-39,
Organism=Saccharomyces cerevisiae, GI6321111, Length=382, Percent_Identity=28.7958115183246, Blast_Score=156, Evalue=8e-39,
Organism=Saccharomyces cerevisiae, GI6319714, Length=380, Percent_Identity=28.9473684210526, Blast_Score=153, Evalue=5e-38,
Organism=Saccharomyces cerevisiae, GI6323306, Length=414, Percent_Identity=27.0531400966184, Blast_Score=134, Evalue=3e-32,
Organism=Saccharomyces cerevisiae, GI6322876, Length=427, Percent_Identity=26.6978922716628, Blast_Score=126, Evalue=6e-30,
Organism=Saccharomyces cerevisiae, GI6324366, Length=353, Percent_Identity=24.3626062322946, Blast_Score=120, Evalue=3e-28,
Organism=Saccharomyces cerevisiae, GI6321374, Length=376, Percent_Identity=25, Blast_Score=99, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24584399, Length=349, Percent_Identity=38.6819484240688, Blast_Score=249, Evalue=4e-66,
Organism=Drosophila melanogaster, GI17985987, Length=377, Percent_Identity=37.4005305039788, Blast_Score=235, Evalue=6e-62,
Organism=Drosophila melanogaster, GI24585582, Length=364, Percent_Identity=34.0659340659341, Blast_Score=233, Evalue=3e-61,
Organism=Drosophila melanogaster, GI24642151, Length=354, Percent_Identity=36.4406779661017, Blast_Score=230, Evalue=2e-60,
Organism=Drosophila melanogaster, GI24662330, Length=375, Percent_Identity=36.5333333333333, Blast_Score=229, Evalue=4e-60,
Organism=Drosophila melanogaster, GI28574962, Length=356, Percent_Identity=36.5168539325843, Blast_Score=228, Evalue=5e-60,
Organism=Drosophila melanogaster, GI24584994, Length=381, Percent_Identity=34.9081364829396, Blast_Score=228, Evalue=9e-60,
Organism=Drosophila melanogaster, GI21355075, Length=349, Percent_Identity=35.243553008596, Blast_Score=224, Evalue=1e-58,
Organism=Drosophila melanogaster, GI21356161, Length=449, Percent_Identity=33.4075723830735, Blast_Score=223, Evalue=2e-58,
Organism=Drosophila melanogaster, GI24644479, Length=358, Percent_Identity=35.4748603351955, Blast_Score=218, Evalue=6e-57,
Organism=Drosophila melanogaster, GI24644483, Length=358, Percent_Identity=35.4748603351955, Blast_Score=218, Evalue=7e-57,
Organism=Drosophila melanogaster, GI24644487, Length=358, Percent_Identity=35.4748603351955, Blast_Score=218, Evalue=8e-57,
Organism=Drosophila melanogaster, GI45551833, Length=358, Percent_Identity=35.4748603351955, Blast_Score=218, Evalue=8e-57,
Organism=Drosophila melanogaster, GI24644485, Length=358, Percent_Identity=35.4748603351955, Blast_Score=218, Evalue=8e-57,
Organism=Drosophila melanogaster, GI281361218, Length=358, Percent_Identity=35.4748603351955, Blast_Score=218, Evalue=9e-57,
Organism=Drosophila melanogaster, GI24644481, Length=358, Percent_Identity=35.4748603351955, Blast_Score=218, Evalue=9e-57,
Organism=Drosophila melanogaster, GI28575014, Length=357, Percent_Identity=36.1344537815126, Blast_Score=217, Evalue=1e-56,
Organism=Drosophila melanogaster, GI18857967, Length=365, Percent_Identity=33.6986301369863, Blast_Score=209, Evalue=3e-54,
Organism=Drosophila melanogaster, GI24583281, Length=378, Percent_Identity=30.952380952381, Blast_Score=207, Evalue=1e-53,
Organism=Drosophila melanogaster, GI24583279, Length=360, Percent_Identity=31.9444444444444, Blast_Score=207, Evalue=1e-53,
Organism=Drosophila melanogaster, GI24645031, Length=359, Percent_Identity=34.5403899721448, Blast_Score=206, Evalue=3e-53,
Organism=Drosophila melanogaster, GI17977678, Length=359, Percent_Identity=34.5403899721448, Blast_Score=204, Evalue=1e-52,
Organism=Drosophila melanogaster, GI17136814, Length=383, Percent_Identity=34.4647519582245, Blast_Score=201, Evalue=7e-52,
Organism=Drosophila melanogaster, GI24582080, Length=367, Percent_Identity=33.7874659400545, Blast_Score=197, Evalue=1e-50,
Organism=Drosophila melanogaster, GI24582078, Length=367, Percent_Identity=33.7874659400545, Blast_Score=197, Evalue=1e-50,
Organism=Drosophila melanogaster, GI17136248, Length=367, Percent_Identity=33.7874659400545, Blast_Score=197, Evalue=1e-50,
Organism=Drosophila melanogaster, GI24582075, Length=367, Percent_Identity=33.7874659400545, Blast_Score=197, Evalue=1e-50,
Organism=Drosophila melanogaster, GI28571808, Length=353, Percent_Identity=31.1614730878187, Blast_Score=186, Evalue=4e-47,
Organism=Drosophila melanogaster, GI28571809, Length=353, Percent_Identity=31.1614730878187, Blast_Score=186, Evalue=4e-47,
Organism=Drosophila melanogaster, GI24581954, Length=365, Percent_Identity=29.5890410958904, Blast_Score=181, Evalue=8e-46,
Organism=Drosophila melanogaster, GI24581952, Length=365, Percent_Identity=29.5890410958904, Blast_Score=181, Evalue=8e-46,
Organism=Drosophila melanogaster, GI24581956, Length=365, Percent_Identity=29.5890410958904, Blast_Score=181, Evalue=8e-46,
Organism=Drosophila melanogaster, GI281365720, Length=312, Percent_Identity=34.9358974358974, Blast_Score=179, Evalue=5e-45,
Organism=Drosophila melanogaster, GI24642822, Length=367, Percent_Identity=30.5177111716621, Blast_Score=174, Evalue=2e-43,
Organism=Drosophila melanogaster, GI24666101, Length=357, Percent_Identity=33.0532212885154, Blast_Score=173, Evalue=2e-43,
Organism=Drosophila melanogaster, GI24643725, Length=406, Percent_Identity=28.5714285714286, Blast_Score=162, Evalue=7e-40,
Organism=Drosophila melanogaster, GI21355559, Length=407, Percent_Identity=29.4840294840295, Blast_Score=162, Evalue=7e-40,
Organism=Drosophila melanogaster, GI20130173, Length=441, Percent_Identity=27.437641723356, Blast_Score=152, Evalue=6e-37,
Organism=Drosophila melanogaster, GI17647335, Length=357, Percent_Identity=28.0112044817927, Blast_Score=147, Evalue=1e-35,
Organism=Drosophila melanogaster, GI19920478, Length=335, Percent_Identity=30.1492537313433, Blast_Score=140, Evalue=2e-33,
Organism=Drosophila melanogaster, GI17136666, Length=417, Percent_Identity=26.378896882494, Blast_Score=130, Evalue=2e-30,
Organism=Drosophila melanogaster, GI24640164, Length=369, Percent_Identity=27.10027100271, Blast_Score=128, Evalue=7e-30,
Organism=Drosophila melanogaster, GI18859659, Length=219, Percent_Identity=35.6164383561644, Blast_Score=127, Evalue=1e-29,
Organism=Drosophila melanogaster, GI28571338, Length=219, Percent_Identity=35.6164383561644, Blast_Score=127, Evalue=1e-29,
Organism=Drosophila melanogaster, GI24668515, Length=326, Percent_Identity=29.1411042944785, Blast_Score=124, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 50849; Mature: 50718

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFARLGLAPAITSALESLNYQQPTEIQQKAIPVALSGRNLLAAAQTGTGKTAAFGLPLI
CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCEEECCCCEEEEECCCCCCHHHHCCHHH
ERLSQGKTERKKRVRAVILAPTRELVVQVADNLSAYAANLPLTVLAMYGGVDMQAQKQAL
HHHHCCHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHH
IAGVDILVATPGRLKDMYHQRAVYFEEIQVLVLDEADRMLDMGFIEVINDLISRMPTNRQ
HHCCEEEEECCHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCH
NLLFSATLSPRIRELAKTAVPDPVEIAIAKPSKKEISQWLVTVDKDTKSALLSHLIQTEQ
HEEEEECCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHEECCCHHHHHHHHHHHHHH
WQQALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQAVREQVLSEFKDGSLQYLVATGV
HHEEEEEEECCCCHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHCCCCEEEEEECCC
AARGIDVDKLERVVNYDLPFPPDEYIHRIGRTGRAGMTGEAVSLLSKDDFKNLCMIESRL
HHCCCCHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHH
GHVIERRVIEGFEPKKPIPVSILDYKPKSQPKAQPSSELSPQRNSQPSSQRKSRTEKLRA
HHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
SEGGTAAKSPWAAAQRKKPANPRHGTSAARSGPPKGKDSGKPRG
CCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SFARLGLAPAITSALESLNYQQPTEIQQKAIPVALSGRNLLAAAQTGTGKTAAFGLPLI
CCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCEEECCCCEEEEECCCCCCHHHHCCHHH
ERLSQGKTERKKRVRAVILAPTRELVVQVADNLSAYAANLPLTVLAMYGGVDMQAQKQAL
HHHHCCHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHH
IAGVDILVATPGRLKDMYHQRAVYFEEIQVLVLDEADRMLDMGFIEVINDLISRMPTNRQ
HHCCEEEEECCHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCH
NLLFSATLSPRIRELAKTAVPDPVEIAIAKPSKKEISQWLVTVDKDTKSALLSHLIQTEQ
HEEEEECCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHEECCCHHHHHHHHHHHHHH
WQQALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQAVREQVLSEFKDGSLQYLVATGV
HHEEEEEEECCCCHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHCCCCEEEEEECCC
AARGIDVDKLERVVNYDLPFPPDEYIHRIGRTGRAGMTGEAVSLLSKDDFKNLCMIESRL
HHCCCCHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHH
GHVIERRVIEGFEPKKPIPVSILDYKPKSQPKAQPSSELSPQRNSQPSSQRKSRTEKLRA
HHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
SEGGTAAKSPWAAAQRKKPANPRHGTSAARSGPPKGKDSGKPRG
CCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8037924; 8905232; 9278503; 1931833; 10361280 [H]