The gene/protein map for NC_008700 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119773408

Identifier: 119773408

GI number: 119773408

Start: 306124

End: 307608

Strand: Direct

Name: 119773408

Synonym: Sama_0267

Alternate gene names: NA

Gene position: 306124-307608 (Clockwise)

Preceding gene: 119773401

Following gene: 119773409

Centisome position: 7.11

GC content: 60.2

Gene sequence:

>1485_bases
TTGCAGCCAGGCAGTTTGTTTACCACGGTGGGTTGTGACAATGGTCGCCGTACCGGCGCCATTGGCTTGGTGACCTACAC
CCTTCCCGGGATTCTGGTGTTGCTGTTTGGTAGCGGCCATTGGTTGTGGCTGCCCGGAATGCTGCTTGCAGCGCTGTTTG
GCCTGTCGCTGATGCGTCGCTGCCGCGACGCCCACAGGCCCCGTGGCTATCTGGTGGCGGCTTTGGTGCCTTTGCCTCTC
TGGCTGTTAGTGCTGAGTATGGCGGGTAATGCCGCCCTGGGACTGATTTTGTTTGCCCTGGGGCTTGGTATCACCCTCTT
GGTCAGCGTCTTGCCATCACGCCCCGTGAAAGATTATGTCGATGGGTATTGGTCGGCAGACATGCCCGCGCCCGAACCTC
TGACCCCGAGGCGTGAGCCGACTCTCGGTGGTGAAGCGCCCGATGACGCCTTTGATTCAGCCTGGGATGATTCCGACGAA
GAAGAAACCGAGGCGCTCGGCCCATGGCACACCGCCAGCTCTGCAGACCATGACACCGCCAGGGCTCACGGCCAACCAAT
AAAGCCGCAGCCACATGCGCGGTTTCGGCAAGACACTGTTCAGGATTATTCCGCCACTGAGCAGGACAAGACCGCTGCGT
TGGCCGTGTTTGGCATGTCAGCAACCCGTGAGCAACACCTTGTCATCGAAGCCAATCACGGCATCAATGTCGCCAGCAGG
CACTCCCATGACGAGCCGGACCAGACAATCGATGCGCGCCACTCCCGGGATGCAGACCCTCACCATCAGGATACCCCCAT
CTGGCAGCAATTTACCCAGCGCAGGGCTGTCACCGGCATGGGGGATGACGATATCGCCGACGATACGCCTCCTTCGGGCA
ATGAAACCTATGACTCCGAGCCAGAACCCCGGCCGCTGAGAAGTTGGAGCGATGCCTTCAATGGCGATGGTTCGCTCGAG
GTGCTGATGGAGGCCATCTACCTGCACCTTAAAAATTGGTGGCGCTTCTATTTATCCGGCGCGGCGGCTGTGCTGTTTGG
GGTGGCGGTTGTCGCCATGGGTATGCGTTTGAGCAGTGCCCCCGAGGAGATAGGCAGCAGTGCAACCGGCAGCCAAGGCG
ACGCTTTGCAGGCCTCCACCCGACTCGAGTCCGGCCTGGAGCTGGCATTGGATAACGAGGCCCTCATTCTCAGCTGGCAT
GCCAACAGCCGCAGTAACGGCATTATCTGGTCACTCGCTACGGCAGAAGGCGAGCGCCACTGTGCCAGTCTGCTGTTTAA
CAACGGCAACCGATATCGCCCAATGCAGGTGGCCGATGAGCAAGGAATGCGCCGTGCGCGCTTTTCACCGCTGGATACCC
AGTCTATTGTGCGGGACCTGGCCCTTCGGGGGAACGTGCAGCTCTGTGGTCAGGGTTTCAGTCTCAAAGGCAGTCAGGCG
GCCATTGAAGGGCATCAGGACTTCGCGGTGTTCCTGGCCCCCTGA

Upstream 100 bases:

>100_bases
GCTGCCTTCTGCGCCAGCCACACAGGACAGACGCTGACATTTCACTGAAAATTGGCTAGTCTGCCCAAGATTATATGGCC
ATGTTTTCTGAGGTGATGCT

Downstream 100 bases:

>100_bases
TATTCTGCTGGCGCCCGTAAAAGGCCATGCATTACACTTCCGGGCCTATTGTGATGTTCGCAGTTTTTTGGGGATTTAAG
AGGTAATGGTGCAACTGACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 494; Mature: 494

Protein sequence:

>494_residues
MQPGSLFTTVGCDNGRRTGAIGLVTYTLPGILVLLFGSGHWLWLPGMLLAALFGLSLMRRCRDAHRPRGYLVAALVPLPL
WLLVLSMAGNAALGLILFALGLGITLLVSVLPSRPVKDYVDGYWSADMPAPEPLTPRREPTLGGEAPDDAFDSAWDDSDE
EETEALGPWHTASSADHDTARAHGQPIKPQPHARFRQDTVQDYSATEQDKTAALAVFGMSATREQHLVIEANHGINVASR
HSHDEPDQTIDARHSRDADPHHQDTPIWQQFTQRRAVTGMGDDDIADDTPPSGNETYDSEPEPRPLRSWSDAFNGDGSLE
VLMEAIYLHLKNWWRFYLSGAAAVLFGVAVVAMGMRLSSAPEEIGSSATGSQGDALQASTRLESGLELALDNEALILSWH
ANSRSNGIIWSLATAEGERHCASLLFNNGNRYRPMQVADEQGMRRARFSPLDTQSIVRDLALRGNVQLCGQGFSLKGSQA
AIEGHQDFAVFLAP

Sequences:

>Translated_494_residues
MQPGSLFTTVGCDNGRRTGAIGLVTYTLPGILVLLFGSGHWLWLPGMLLAALFGLSLMRRCRDAHRPRGYLVAALVPLPL
WLLVLSMAGNAALGLILFALGLGITLLVSVLPSRPVKDYVDGYWSADMPAPEPLTPRREPTLGGEAPDDAFDSAWDDSDE
EETEALGPWHTASSADHDTARAHGQPIKPQPHARFRQDTVQDYSATEQDKTAALAVFGMSATREQHLVIEANHGINVASR
HSHDEPDQTIDARHSRDADPHHQDTPIWQQFTQRRAVTGMGDDDIADDTPPSGNETYDSEPEPRPLRSWSDAFNGDGSLE
VLMEAIYLHLKNWWRFYLSGAAAVLFGVAVVAMGMRLSSAPEEIGSSATGSQGDALQASTRLESGLELALDNEALILSWH
ANSRSNGIIWSLATAEGERHCASLLFNNGNRYRPMQVADEQGMRRARFSPLDTQSIVRDLALRGNVQLCGQGFSLKGSQA
AIEGHQDFAVFLAP
>Mature_494_residues
MQPGSLFTTVGCDNGRRTGAIGLVTYTLPGILVLLFGSGHWLWLPGMLLAALFGLSLMRRCRDAHRPRGYLVAALVPLPL
WLLVLSMAGNAALGLILFALGLGITLLVSVLPSRPVKDYVDGYWSADMPAPEPLTPRREPTLGGEAPDDAFDSAWDDSDE
EETEALGPWHTASSADHDTARAHGQPIKPQPHARFRQDTVQDYSATEQDKTAALAVFGMSATREQHLVIEANHGINVASR
HSHDEPDQTIDARHSRDADPHHQDTPIWQQFTQRRAVTGMGDDDIADDTPPSGNETYDSEPEPRPLRSWSDAFNGDGSLE
VLMEAIYLHLKNWWRFYLSGAAAVLFGVAVVAMGMRLSSAPEEIGSSATGSQGDALQASTRLESGLELALDNEALILSWH
ANSRSNGIIWSLATAEGERHCASLLFNNGNRYRPMQVADEQGMRRARFSPLDTQSIVRDLALRGNVQLCGQGFSLKGSQA
AIEGHQDFAVFLAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53786; Mature: 53786

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPGSLFTTVGCDNGRRTGAIGLVTYTLPGILVLLFGSGHWLWLPGMLLAALFGLSLMRR
CCCCCEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHH
CRDAHRPRGYLVAALVPLPLWLLVLSMAGNAALGLILFALGLGITLLVSVLPSRPVKDYV
HHHHCCCCCEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
DGYWSADMPAPEPLTPRREPTLGGEAPDDAFDSAWDDSDEEETEALGPWHTASSADHDTA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCHH
RAHGQPIKPQPHARFRQDTVQDYSATEQDKTAALAVFGMSATREQHLVIEANHGINVASR
HHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHEEEEECCCCCCCCEEEEECCCCCCCCCC
HSHDEPDQTIDARHSRDADPHHQDTPIWQQFTQRRAVTGMGDDDIADDTPPSGNETYDSE
CCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PEPRPLRSWSDAFNGDGSLEVLMEAIYLHLKNWWRFYLSGAAAVLFGVAVVAMGMRLSSA
CCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PEEIGSSATGSQGDALQASTRLESGLELALDNEALILSWHANSRSNGIIWSLATAEGERH
HHHHCCCCCCCCCCHHHHHHHHHCCCEEEECCCEEEEEEECCCCCCCEEEEEECCCCHHH
CASLLFNNGNRYRPMQVADEQGMRRARFSPLDTQSIVRDLALRGNVQLCGQGFSLKGSQA
HHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCHH
AIEGHQDFAVFLAP
HCCCCCCEEEEECC
>Mature Secondary Structure
MQPGSLFTTVGCDNGRRTGAIGLVTYTLPGILVLLFGSGHWLWLPGMLLAALFGLSLMRR
CCCCCEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHH
CRDAHRPRGYLVAALVPLPLWLLVLSMAGNAALGLILFALGLGITLLVSVLPSRPVKDYV
HHHHCCCCCEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
DGYWSADMPAPEPLTPRREPTLGGEAPDDAFDSAWDDSDEEETEALGPWHTASSADHDTA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCHH
RAHGQPIKPQPHARFRQDTVQDYSATEQDKTAALAVFGMSATREQHLVIEANHGINVASR
HHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHEEEEECCCCCCCCEEEEECCCCCCCCCC
HSHDEPDQTIDARHSRDADPHHQDTPIWQQFTQRRAVTGMGDDDIADDTPPSGNETYDSE
CCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PEPRPLRSWSDAFNGDGSLEVLMEAIYLHLKNWWRFYLSGAAAVLFGVAVVAMGMRLSSA
CCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PEEIGSSATGSQGDALQASTRLESGLELALDNEALILSWHANSRSNGIIWSLATAEGERH
HHHHCCCCCCCCCCHHHHHHHHHCCCEEEECCCEEEEEEECCCCCCCEEEEEECCCCHHH
CASLLFNNGNRYRPMQVADEQGMRRARFSPLDTQSIVRDLALRGNVQLCGQGFSLKGSQA
HHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCHH
AIEGHQDFAVFLAP
HCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA