| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is argB
Identifier: 119773398
GI number: 119773398
Start: 295075
End: 295863
Strand: Direct
Name: argB
Synonym: Sama_0257
Alternate gene names: 119773398
Gene position: 295075-295863 (Clockwise)
Preceding gene: 119773397
Following gene: 119773399
Centisome position: 6.85
GC content: 56.53
Gene sequence:
>789_bases ATGTCAGTAACTAACAAAGTATTGGTTCTCAAAGTGGGCGGCGCCCTGCTGCAGTGCGAAATGGGCATGGCCAGACTGAT GGACACAGCCAGACAGCTGCTGGAAAAAGGCGAGCAGGTTGTGCTGGTGCACGGCGGCGGTTGTCTGGTTGACGAGCAGC TCAAAGCCAATGGTATGGAGACGGTTAAGCTCGACGGTCTGCGGGTCACTCCGGCCGAGCAGATGCCCATTATCGCCGGT GCGCTGGCGGGTACGTCCAACAAGTTGCTCCAGGGTGCGGCGGCCAAGGCCGGTGTGGTGAGCATGGGCATGAGCCTGTG TGATGCCAACATGGTGACTGCGGTCATCAAAGACGAGCGCCTGGGCATGGTTGGTGAAGTGAGCCCCAAAGATGCCAAAG CACTGGAATTTATTCTCGCTCAGGGCTGGCTGCCGATTATCAGTTCCATCGCCATGGGCGAAGACGGTGAGCTTTTGAAC GTGAATGCCGACCAGGCAGCCTCAGTACTCGCCAAGCTCCTTGGCGGAAAACTGGTGTTGCTGTCTGACGTATCGGGCGT GCTCGACGGTAAAGGCAAGTTAATCCCCAGTTTGAACAGCCAGGAGATAGATGAGCTGGTCAAACTGGGCGTGATAGAAA AAGGCATGAAAGTCAAAGTAGAAGCAGCACTGGAAGTTGCCCAGTGGCTGGGACAACCGGTACAGGTTGCCTCGTGGCGT GACAGCGGCCAAATGGCTGCGTTAATCAAGGGTGAGGCCGTGGGCACACAGATACAACCTCAGGAGTAA
Upstream 100 bases:
>100_bases GGTGGTTGCCAGTGCCATCGACAATTTGATGAAGGGCGCTGCCAGTCAGGCACTTCAATGCATAAAAATTCATTTTGGCG TTTAAGGCGGGAGCATCGGA
Downstream 100 bases:
>100_bases TATATGAAGCATTTGATATCGATAAAAGAACTGACGCAAAAGCAGATGTTGGATCTGCTGACTCTGGCAAAGGAGATCAA GGCCGACCCGGCCAAATACT
Product: acetylglutamate kinase
Products: NA
Alternate protein names: N-acetyl-L-glutamate 5-phosphotransferase; NAG kinase; AGK
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MSVTNKVLVLKVGGALLQCEMGMARLMDTARQLLEKGEQVVLVHGGGCLVDEQLKANGMETVKLDGLRVTPAEQMPIIAG ALAGTSNKLLQGAAAKAGVVSMGMSLCDANMVTAVIKDERLGMVGEVSPKDAKALEFILAQGWLPIISSIAMGEDGELLN VNADQAASVLAKLLGGKLVLLSDVSGVLDGKGKLIPSLNSQEIDELVKLGVIEKGMKVKVEAALEVAQWLGQPVQVASWR DSGQMAALIKGEAVGTQIQPQE
Sequences:
>Translated_262_residues MSVTNKVLVLKVGGALLQCEMGMARLMDTARQLLEKGEQVVLVHGGGCLVDEQLKANGMETVKLDGLRVTPAEQMPIIAG ALAGTSNKLLQGAAAKAGVVSMGMSLCDANMVTAVIKDERLGMVGEVSPKDAKALEFILAQGWLPIISSIAMGEDGELLN VNADQAASVLAKLLGGKLVLLSDVSGVLDGKGKLIPSLNSQEIDELVKLGVIEKGMKVKVEAALEVAQWLGQPVQVASWR DSGQMAALIKGEAVGTQIQPQE >Mature_261_residues SVTNKVLVLKVGGALLQCEMGMARLMDTARQLLEKGEQVVLVHGGGCLVDEQLKANGMETVKLDGLRVTPAEQMPIIAGA LAGTSNKLLQGAAAKAGVVSMGMSLCDANMVTAVIKDERLGMVGEVSPKDAKALEFILAQGWLPIISSIAMGEDGELLNV NADQAASVLAKLLGGKLVLLSDVSGVLDGKGKLIPSLNSQEIDELVKLGVIEKGMKVKVEAALEVAQWLGQPVQVASWRD SGQMAALIKGEAVGTQIQPQE
Specific function: Arginine biosynthesis; second step. [C]
COG id: COG0548
COG function: function code E; Acetylglutamate kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acetylglutamate kinase family
Homologues:
Organism=Escherichia coli, GI145693208, Length=252, Percent_Identity=46.4285714285714, Blast_Score=205, Evalue=2e-54, Organism=Saccharomyces cerevisiae, GI6320913, Length=257, Percent_Identity=27.6264591439689, Blast_Score=87, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ARGB_SHEAM (A1S262)
Other databases:
- EMBL: CP000507 - RefSeq: YP_926138.1 - ProteinModelPortal: A1S262 - SMR: A1S262 - STRING: A1S262 - GeneID: 4602513 - GenomeReviews: CP000507_GR - KEGG: saz:Sama_0257 - NMPDR: fig|326297.7.peg.247 - eggNOG: COG0548 - HOGENOM: HBG497643 - OMA: MVLCGST - PhylomeDB: A1S262 - ProtClustDB: PRK00942 - GO: GO:0005737 - HAMAP: MF_00082_B - InterPro: IPR004662 - InterPro: IPR001048 - Gene3D: G3DSA:3.40.1160.10 - PIRSF: PIRSF000728 - TIGRFAMs: TIGR00761
Pfam domain/function: PF00696 AA_kinase; SSF53633 Aa_kinase
EC number: =2.7.2.8
Molecular weight: Translated: 27333; Mature: 27201
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: BINDING 68-68 BINDING 160-160
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVTNKVLVLKVGGALLQCEMGMARLMDTARQLLEKGEQVVLVHGGGCLVDEQLKANGME CCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEECHHHHCCCCC TVKLDGLRVTPAEQMPIIAGALAGTSNKLLQGAAAKAGVVSMGMSLCDANMVTAVIKDER EEEECCEEECCHHCCCEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCC LGMVGEVSPKDAKALEFILAQGWLPIISSIAMGEDGELLNVNADQAASVLAKLLGGKLVL CCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHCCCEEE LSDVSGVLDGKGKLIPSLNSQEIDELVKLGVIEKGMKVKVEAALEVAQWLGQPVQVASWR EECCCHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCEEEEEEC DSGQMAALIKGEAVGTQIQPQE CCCCEEEEEECCCCCCCCCCCC >Mature Secondary Structure SVTNKVLVLKVGGALLQCEMGMARLMDTARQLLEKGEQVVLVHGGGCLVDEQLKANGME CCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEECHHHHCCCCC TVKLDGLRVTPAEQMPIIAGALAGTSNKLLQGAAAKAGVVSMGMSLCDANMVTAVIKDER EEEECCEEECCHHCCCEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCC LGMVGEVSPKDAKALEFILAQGWLPIISSIAMGEDGELLNVNADQAASVLAKLLGGKLVL CCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHCCCEEE LSDVSGVLDGKGKLIPSLNSQEIDELVKLGVIEKGMKVKVEAALEVAQWLGQPVQVASWR EECCCHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCEEEEEEC DSGQMAALIKGEAVGTQIQPQE CCCCEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA