Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

Click here to switch to the map view.

The map label for this gene is argC [H]

Identifier: 119773397

GI number: 119773397

Start: 294064

End: 295059

Strand: Direct

Name: argC [H]

Synonym: Sama_0256

Alternate gene names: 119773397

Gene position: 294064-295059 (Clockwise)

Preceding gene: 119773393

Following gene: 119773398

Centisome position: 6.83

GC content: 55.32

Gene sequence:

>996_bases
ATGAGTCAGGAAATCATGAAAAAGATCGCCATTATTGGTGCCAGCGGCTACACAGGCGCGCAGCTCACAGCCCTTATTGA
TGCTGAGCCGCACCTGCAAGTCCAGGGCCTCTATGTGTCTGAAGGCAGTGCCGACAAAGGCAAGCCTCTGTCCTCCTTGT
ATCCGGTGTACAGCCATCTGAAATATTGCCTGTCGCCCCTGACCGATGAAGCCAAAGACGCCATAGTTGCCGAGGCAGAT
GCGGTTGCTCTTGCTACTGAACACTCAGTGTCTTTGGAGCTTGCGGCCTATTTCTATGAAAAAGGCCTGGCGGTGTTCGA
TTTGAGCGGTGCCTATCGCTTTGCTGATACGGCTCAATATCCGAAGTGGTACGGATTTGAGCACAGTCACCCCGAGGTGC
TGGCCAAAGCGGTTTATGGCCTCGCCGAGTGGAACGCCGATGCCGTGGCCGCGACCCGTATGATTGCTGTGCCGGGCTGT
TATCCCACTGCGTCTCTCACGGCGCTGAAACCCTTGAAAGCTATGCTGACCGAAGCACGCCCCGTGATTAACGCCGTCAG
CGGTGTGACAGGTGCTGGCCGCAAGGCGCAGCTGCACACCAGCTTTTGTGAAGTGAGCCTGACGCCCTATGGCGTGCTGG
GCCACAGACATCAACCGGAAATTGCCACCCAGCTGGGTCAGGAAGTGATTTTCACACCGCATCTGGGCAATTTTAAGCGC
GGCATTCTGGCCACCATCACGGTGCAGTTAAAGCCGGGGACCAGCCGTGAAGACGTTGCCAAGGCCTACAGCGTGTATGA
CCAGAGTCCCATAGTGACAGTGAAAGAAGGCCAGTTCCCCAAGGTGGACGACGTGGTTTTCACCCCCAATTGTCATCTGG
GCTGGAAGTTTGACGAAGACAGCGGCTACCTGGTGGTTGCCAGTGCCATCGACAATTTGATGAAGGGCGCTGCCAGTCAG
GCACTTCAATGCATAAAAATTCATTTTGGCGTTTAA

Upstream 100 bases:

>100_bases
CTCACTTCCTGCGACGATAGCTGATTGCACAGGGCGTCATGCCGGGCTGCTAACCCTATTTCAGGTAATTCAATCCAACT
ATCTGTTTGAAAAAATTTTA

Downstream 100 bases:

>100_bases
GGCGGGAGCATCGGAATGTCAGTAACTAACAAAGTATTGGTTCTCAAAGTGGGCGGCGCCCTGCTGCAGTGCGAAATGGG
CATGGCCAGACTGATGGACA

Product: N-acetyl-gamma-glutamyl-phosphate reductase

Products: NA

Alternate protein names: AGPR; N-acetyl-glutamate semialdehyde dehydrogenase; NAGSA dehydrogenase [H]

Number of amino acids: Translated: 331; Mature: 330

Protein sequence:

>331_residues
MSQEIMKKIAIIGASGYTGAQLTALIDAEPHLQVQGLYVSEGSADKGKPLSSLYPVYSHLKYCLSPLTDEAKDAIVAEAD
AVALATEHSVSLELAAYFYEKGLAVFDLSGAYRFADTAQYPKWYGFEHSHPEVLAKAVYGLAEWNADAVAATRMIAVPGC
YPTASLTALKPLKAMLTEARPVINAVSGVTGAGRKAQLHTSFCEVSLTPYGVLGHRHQPEIATQLGQEVIFTPHLGNFKR
GILATITVQLKPGTSREDVAKAYSVYDQSPIVTVKEGQFPKVDDVVFTPNCHLGWKFDEDSGYLVVASAIDNLMKGAASQ
ALQCIKIHFGV

Sequences:

>Translated_331_residues
MSQEIMKKIAIIGASGYTGAQLTALIDAEPHLQVQGLYVSEGSADKGKPLSSLYPVYSHLKYCLSPLTDEAKDAIVAEAD
AVALATEHSVSLELAAYFYEKGLAVFDLSGAYRFADTAQYPKWYGFEHSHPEVLAKAVYGLAEWNADAVAATRMIAVPGC
YPTASLTALKPLKAMLTEARPVINAVSGVTGAGRKAQLHTSFCEVSLTPYGVLGHRHQPEIATQLGQEVIFTPHLGNFKR
GILATITVQLKPGTSREDVAKAYSVYDQSPIVTVKEGQFPKVDDVVFTPNCHLGWKFDEDSGYLVVASAIDNLMKGAASQ
ALQCIKIHFGV
>Mature_330_residues
SQEIMKKIAIIGASGYTGAQLTALIDAEPHLQVQGLYVSEGSADKGKPLSSLYPVYSHLKYCLSPLTDEAKDAIVAEADA
VALATEHSVSLELAAYFYEKGLAVFDLSGAYRFADTAQYPKWYGFEHSHPEVLAKAVYGLAEWNADAVAATRMIAVPGCY
PTASLTALKPLKAMLTEARPVINAVSGVTGAGRKAQLHTSFCEVSLTPYGVLGHRHQPEIATQLGQEVIFTPHLGNFKRG
ILATITVQLKPGTSREDVAKAYSVYDQSPIVTVKEGQFPKVDDVVFTPNCHLGWKFDEDSGYLVVASAIDNLMKGAASQA
LQCIKIHFGV

Specific function: Arginine biosynthesis; third step. [C]

COG id: COG0002

COG function: function code E; Acetylglutamate semialdehyde dehydrogenase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NAGSA dehydrogenase family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790396, Length=330, Percent_Identity=48.7878787878788, Blast_Score=296, Evalue=2e-81,
Organism=Saccharomyces cerevisiae, GI6320913, Length=332, Percent_Identity=30.1204819277108, Blast_Score=121, Evalue=2e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023013
- InterPro:   IPR000706
- InterPro:   IPR016040
- InterPro:   IPR000534
- InterPro:   IPR012280 [H]

Pfam domain/function: PF01118 Semialdhyde_dh; PF02774 Semialdhyde_dhC [H]

EC number: =1.2.1.38 [H]

Molecular weight: Translated: 35623; Mature: 35492

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: PS01224 ARGC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQEIMKKIAIIGASGYTGAQLTALIDAEPHLQVQGLYVSEGSADKGKPLSSLYPVYSHL
CCHHHHHHHHEEECCCCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHH
KYCLSPLTDEAKDAIVAEADAVALATEHSVSLELAAYFYEKGLAVFDLSGAYRFADTAQY
HHHHHHCCCHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCEEEECCCCEECCCCCCC
PKWYGFEHSHPEVLAKAVYGLAEWNADAVAATRMIAVPGCYPTASLTALKPLKAMLTEAR
CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHH
PVINAVSGVTGAGRKAQLHTSFCEVSLTPYGVLGHRHQPEIATQLGQEVIFTPHLGNFKR
HHHHHHHCCCCCCCCEEEEEEEEEEECCCEEECCCCCCCHHHHHCCCEEEECCCCCCCCC
GILATITVQLKPGTSREDVAKAYSVYDQSPIVTVKEGQFPKVDDVVFTPNCHLGWKFDED
CEEEEEEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEECCCCCCCEEEECC
SGYLVVASAIDNLMKGAASQALQCIKIHFGV
CCEEEEHHHHHHHHHHHHHHHHHHHEEEECC
>Mature Secondary Structure 
SQEIMKKIAIIGASGYTGAQLTALIDAEPHLQVQGLYVSEGSADKGKPLSSLYPVYSHL
CHHHHHHHHEEECCCCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHH
KYCLSPLTDEAKDAIVAEADAVALATEHSVSLELAAYFYEKGLAVFDLSGAYRFADTAQY
HHHHHHCCCHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCEEEECCCCEECCCCCCC
PKWYGFEHSHPEVLAKAVYGLAEWNADAVAATRMIAVPGCYPTASLTALKPLKAMLTEAR
CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHH
PVINAVSGVTGAGRKAQLHTSFCEVSLTPYGVLGHRHQPEIATQLGQEVIFTPHLGNFKR
HHHHHHHCCCCCCCCEEEEEEEEEEECCCEEECCCCCCCHHHHHCCCEEEECCCCCCCCC
GILATITVQLKPGTSREDVAKAYSVYDQSPIVTVKEGQFPKVDDVVFTPNCHLGWKFDED
CEEEEEEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEECCCCCCCEEEECC
SGYLVVASAIDNLMKGAASQALQCIKIHFGV
CCEEEEHHHHHHHHHHHHHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA