| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is argC [H]
Identifier: 119773397
GI number: 119773397
Start: 294064
End: 295059
Strand: Direct
Name: argC [H]
Synonym: Sama_0256
Alternate gene names: 119773397
Gene position: 294064-295059 (Clockwise)
Preceding gene: 119773393
Following gene: 119773398
Centisome position: 6.83
GC content: 55.32
Gene sequence:
>996_bases ATGAGTCAGGAAATCATGAAAAAGATCGCCATTATTGGTGCCAGCGGCTACACAGGCGCGCAGCTCACAGCCCTTATTGA TGCTGAGCCGCACCTGCAAGTCCAGGGCCTCTATGTGTCTGAAGGCAGTGCCGACAAAGGCAAGCCTCTGTCCTCCTTGT ATCCGGTGTACAGCCATCTGAAATATTGCCTGTCGCCCCTGACCGATGAAGCCAAAGACGCCATAGTTGCCGAGGCAGAT GCGGTTGCTCTTGCTACTGAACACTCAGTGTCTTTGGAGCTTGCGGCCTATTTCTATGAAAAAGGCCTGGCGGTGTTCGA TTTGAGCGGTGCCTATCGCTTTGCTGATACGGCTCAATATCCGAAGTGGTACGGATTTGAGCACAGTCACCCCGAGGTGC TGGCCAAAGCGGTTTATGGCCTCGCCGAGTGGAACGCCGATGCCGTGGCCGCGACCCGTATGATTGCTGTGCCGGGCTGT TATCCCACTGCGTCTCTCACGGCGCTGAAACCCTTGAAAGCTATGCTGACCGAAGCACGCCCCGTGATTAACGCCGTCAG CGGTGTGACAGGTGCTGGCCGCAAGGCGCAGCTGCACACCAGCTTTTGTGAAGTGAGCCTGACGCCCTATGGCGTGCTGG GCCACAGACATCAACCGGAAATTGCCACCCAGCTGGGTCAGGAAGTGATTTTCACACCGCATCTGGGCAATTTTAAGCGC GGCATTCTGGCCACCATCACGGTGCAGTTAAAGCCGGGGACCAGCCGTGAAGACGTTGCCAAGGCCTACAGCGTGTATGA CCAGAGTCCCATAGTGACAGTGAAAGAAGGCCAGTTCCCCAAGGTGGACGACGTGGTTTTCACCCCCAATTGTCATCTGG GCTGGAAGTTTGACGAAGACAGCGGCTACCTGGTGGTTGCCAGTGCCATCGACAATTTGATGAAGGGCGCTGCCAGTCAG GCACTTCAATGCATAAAAATTCATTTTGGCGTTTAA
Upstream 100 bases:
>100_bases CTCACTTCCTGCGACGATAGCTGATTGCACAGGGCGTCATGCCGGGCTGCTAACCCTATTTCAGGTAATTCAATCCAACT ATCTGTTTGAAAAAATTTTA
Downstream 100 bases:
>100_bases GGCGGGAGCATCGGAATGTCAGTAACTAACAAAGTATTGGTTCTCAAAGTGGGCGGCGCCCTGCTGCAGTGCGAAATGGG CATGGCCAGACTGATGGACA
Product: N-acetyl-gamma-glutamyl-phosphate reductase
Products: NA
Alternate protein names: AGPR; N-acetyl-glutamate semialdehyde dehydrogenase; NAGSA dehydrogenase [H]
Number of amino acids: Translated: 331; Mature: 330
Protein sequence:
>331_residues MSQEIMKKIAIIGASGYTGAQLTALIDAEPHLQVQGLYVSEGSADKGKPLSSLYPVYSHLKYCLSPLTDEAKDAIVAEAD AVALATEHSVSLELAAYFYEKGLAVFDLSGAYRFADTAQYPKWYGFEHSHPEVLAKAVYGLAEWNADAVAATRMIAVPGC YPTASLTALKPLKAMLTEARPVINAVSGVTGAGRKAQLHTSFCEVSLTPYGVLGHRHQPEIATQLGQEVIFTPHLGNFKR GILATITVQLKPGTSREDVAKAYSVYDQSPIVTVKEGQFPKVDDVVFTPNCHLGWKFDEDSGYLVVASAIDNLMKGAASQ ALQCIKIHFGV
Sequences:
>Translated_331_residues MSQEIMKKIAIIGASGYTGAQLTALIDAEPHLQVQGLYVSEGSADKGKPLSSLYPVYSHLKYCLSPLTDEAKDAIVAEAD AVALATEHSVSLELAAYFYEKGLAVFDLSGAYRFADTAQYPKWYGFEHSHPEVLAKAVYGLAEWNADAVAATRMIAVPGC YPTASLTALKPLKAMLTEARPVINAVSGVTGAGRKAQLHTSFCEVSLTPYGVLGHRHQPEIATQLGQEVIFTPHLGNFKR GILATITVQLKPGTSREDVAKAYSVYDQSPIVTVKEGQFPKVDDVVFTPNCHLGWKFDEDSGYLVVASAIDNLMKGAASQ ALQCIKIHFGV >Mature_330_residues SQEIMKKIAIIGASGYTGAQLTALIDAEPHLQVQGLYVSEGSADKGKPLSSLYPVYSHLKYCLSPLTDEAKDAIVAEADA VALATEHSVSLELAAYFYEKGLAVFDLSGAYRFADTAQYPKWYGFEHSHPEVLAKAVYGLAEWNADAVAATRMIAVPGCY PTASLTALKPLKAMLTEARPVINAVSGVTGAGRKAQLHTSFCEVSLTPYGVLGHRHQPEIATQLGQEVIFTPHLGNFKRG ILATITVQLKPGTSREDVAKAYSVYDQSPIVTVKEGQFPKVDDVVFTPNCHLGWKFDEDSGYLVVASAIDNLMKGAASQA LQCIKIHFGV
Specific function: Arginine biosynthesis; third step. [C]
COG id: COG0002
COG function: function code E; Acetylglutamate semialdehyde dehydrogenase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAGSA dehydrogenase family. Type 1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790396, Length=330, Percent_Identity=48.7878787878788, Blast_Score=296, Evalue=2e-81, Organism=Saccharomyces cerevisiae, GI6320913, Length=332, Percent_Identity=30.1204819277108, Blast_Score=121, Evalue=2e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023013 - InterPro: IPR000706 - InterPro: IPR016040 - InterPro: IPR000534 - InterPro: IPR012280 [H]
Pfam domain/function: PF01118 Semialdhyde_dh; PF02774 Semialdhyde_dhC [H]
EC number: =1.2.1.38 [H]
Molecular weight: Translated: 35623; Mature: 35492
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: PS01224 ARGC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQEIMKKIAIIGASGYTGAQLTALIDAEPHLQVQGLYVSEGSADKGKPLSSLYPVYSHL CCHHHHHHHHEEECCCCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHH KYCLSPLTDEAKDAIVAEADAVALATEHSVSLELAAYFYEKGLAVFDLSGAYRFADTAQY HHHHHHCCCHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCEEEECCCCEECCCCCCC PKWYGFEHSHPEVLAKAVYGLAEWNADAVAATRMIAVPGCYPTASLTALKPLKAMLTEAR CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHH PVINAVSGVTGAGRKAQLHTSFCEVSLTPYGVLGHRHQPEIATQLGQEVIFTPHLGNFKR HHHHHHHCCCCCCCCEEEEEEEEEEECCCEEECCCCCCCHHHHHCCCEEEECCCCCCCCC GILATITVQLKPGTSREDVAKAYSVYDQSPIVTVKEGQFPKVDDVVFTPNCHLGWKFDED CEEEEEEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEECCCCCCCEEEECC SGYLVVASAIDNLMKGAASQALQCIKIHFGV CCEEEEHHHHHHHHHHHHHHHHHHHEEEECC >Mature Secondary Structure SQEIMKKIAIIGASGYTGAQLTALIDAEPHLQVQGLYVSEGSADKGKPLSSLYPVYSHL CHHHHHHHHEEECCCCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHH KYCLSPLTDEAKDAIVAEADAVALATEHSVSLELAAYFYEKGLAVFDLSGAYRFADTAQY HHHHHHCCCHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCEEEECCCCEECCCCCCC PKWYGFEHSHPEVLAKAVYGLAEWNADAVAATRMIAVPGCYPTASLTALKPLKAMLTEAR CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHH PVINAVSGVTGAGRKAQLHTSFCEVSLTPYGVLGHRHQPEIATQLGQEVIFTPHLGNFKR HHHHHHHCCCCCCCCEEEEEEEEEEECCCEEECCCCCCCHHHHHCCCEEEECCCCCCCCC GILATITVQLKPGTSREDVAKAYSVYDQSPIVTVKEGQFPKVDDVVFTPNCHLGWKFDED CEEEEEEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEECCCCCCCEEEECC SGYLVVASAIDNLMKGAASQALQCIKIHFGV CCEEEEHHHHHHHHHHHHHHHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA