Definition | Nocardioides sp. JS614 chromosome, complete genome. |
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Accession | NC_008699 |
Length | 4,985,871 |
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The map label for this gene is 119717475
Identifier: 119717475
GI number: 119717475
Start: 3454083
End: 3454583
Strand: Reverse
Name: 119717475
Synonym: Noca_3251
Alternate gene names: NA
Gene position: 3454583-3454083 (Counterclockwise)
Preceding gene: 119717476
Following gene: 119717474
Centisome position: 69.29
GC content: 74.05
Gene sequence:
>501_bases ATGGCCGGTGGGGAGGCACGGCGACGCCGTGTGCGCGCCGGCGGGCGTGAGCGTGGCGCCGCCGCGGTCGAGTTCGCGCT GGTCGCCCCGATCCTGCTGCTGCTGGTCTTCGGCATCATCAGCTACGGCTACATGCTCAGCTTCCGCCAGGCGCTGAGCC AGGGCGCCGCCGAGGGAGCGCGGGCGGCGGCAGTGTCGGCGCTGCCGGCCGCCGCGGACAAGCAGCAGGCCGCGCTCGAC GCCGTCAACGAGGCGCTCGACTCCTACGGCGTCACGTGCCAGGGCACCGCAGCGGGCTCCAGCCTGCTGAAGGGGACCAC CGCCGTCGGCTCCTGCTCGGTCCTCACGGCAGCGTGCGCCAACGACGGCACCAAGGAGTGCGTGACGGCGTCGCTGGACT ACGAGTACGCCGACCACCCGCTGCTGCCCAGCGTCCCCGGGCTCGGCGCCGTGCTGCCCGACCACCTGCGGTACGACGCG GTGGCCCAGGTCAGCGGATGA
Upstream 100 bases:
>100_bases GACCAGACCAGTTCCGCCGAATCGGCCGCCGACGTGGTCTACGCCACATAGCCTGTGGTTCGGCGGCCGTGGGGACCGCC GTCTGACACCGAGGTGAGCG
Downstream 100 bases:
>100_bases GGCGCCAGCGCGACGAGCGGGGGGCCGTTGTCCCGTTCGTCGCGGTGACGCTCACGCTGCTGATCGCAATGGCCGCGTTC GCCGTCGACCTGGGAATGCA
Product: TadE family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MAGGEARRRRVRAGGRERGAAAVEFALVAPILLLLVFGIISYGYMLSFRQALSQGAAEGARAAAVSALPAAADKQQAALD AVNEALDSYGVTCQGTAAGSSLLKGTTAVGSCSVLTAACANDGTKECVTASLDYEYADHPLLPSVPGLGAVLPDHLRYDA VAQVSG
Sequences:
>Translated_166_residues MAGGEARRRRVRAGGRERGAAAVEFALVAPILLLLVFGIISYGYMLSFRQALSQGAAEGARAAAVSALPAAADKQQAALD AVNEALDSYGVTCQGTAAGSSLLKGTTAVGSCSVLTAACANDGTKECVTASLDYEYADHPLLPSVPGLGAVLPDHLRYDA VAQVSG >Mature_165_residues AGGEARRRRVRAGGRERGAAAVEFALVAPILLLLVFGIISYGYMLSFRQALSQGAAEGARAAAVSALPAAADKQQAALDA VNEALDSYGVTCQGTAAGSSLLKGTTAVGSCSVLTAACANDGTKECVTASLDYEYADHPLLPSVPGLGAVLPDHLRYDAV AQVSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16812; Mature: 16681
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGGEARRRRVRAGGRERGAAAVEFALVAPILLLLVFGIISYGYMLSFRQALSQGAAEGA CCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAAAVSALPAAADKQQAALDAVNEALDSYGVTCQGTAAGSSLLKGTTAVGSCSVLTAACA HHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHCCCCCCHHHHHHHHHH NDGTKECVTASLDYEYADHPLLPSVPGLGAVLPDHLRYDAVAQVSG CCCHHHHEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure AGGEARRRRVRAGGRERGAAAVEFALVAPILLLLVFGIISYGYMLSFRQALSQGAAEGA CCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAAAVSALPAAADKQQAALDAVNEALDSYGVTCQGTAAGSSLLKGTTAVGSCSVLTAACA HHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHCCCCCCHHHHHHHHHH NDGTKECVTASLDYEYADHPLLPSVPGLGAVLPDHLRYDAVAQVSG CCCHHHHEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA