Definition | Nocardioides sp. JS614 chromosome, complete genome. |
---|---|
Accession | NC_008699 |
Length | 4,985,871 |
Click here to switch to the map view.
The map label for this gene is 119717434
Identifier: 119717434
GI number: 119717434
Start: 3409719
End: 3409985
Strand: Reverse
Name: 119717434
Synonym: Noca_3210
Alternate gene names: NA
Gene position: 3409985-3409719 (Counterclockwise)
Preceding gene: 119717435
Following gene: 119717433
Centisome position: 68.39
GC content: 64.79
Gene sequence:
>267_bases GTGCTCGCGGGCATCGCGGCGTCCGACGCGATCTGCGCTCGACGACTTGGTCTGATTCACCGCGGCGATGACCATCGAAC GGCTTCCGGACTCCTCGCCACTGCGACCCCCGACGGAGCAAAGCTGTCTCAGGTGTTCCGCCGCCTAATCGACATCAAGG ACGAAGCGCACTACGGACTGACGCTCGTGTCCTCGCGCAAGGCGCGTGACGCAGTGCGTTGGGCGCAGACCCTGGTTTCG CGTGCGGTCGAAGAGCTTGAACGCTGA
Upstream 100 bases:
>100_bases TCGGACGCGGGCTCAAGCGGCCGTCGCGTACCTCGAGGTCGCCAGTCTCGTTCTCGATGATGATTCAGCCGCCATGCCTG GCGTCGCGGCGGGTCTTGCG
Downstream 100 bases:
>100_bases CCGGGTGGTTCGAGGCGAGGCCCGCGCGTTCTTACGCAACGCCGTCGTCACTACGACTGCTTGATGCACAACCGTGTCGA AGTGACGCACCTCGCCAACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 88; Mature: 88
Protein sequence:
>88_residues MLAGIAASDAICARRLGLIHRGDDHRTASGLLATATPDGAKLSQVFRRLIDIKDEAHYGLTLVSSRKARDAVRWAQTLVS RAVEELER
Sequences:
>Translated_88_residues MLAGIAASDAICARRLGLIHRGDDHRTASGLLATATPDGAKLSQVFRRLIDIKDEAHYGLTLVSSRKARDAVRWAQTLVS RAVEELER >Mature_88_residues MLAGIAASDAICARRLGLIHRGDDHRTASGLLATATPDGAKLSQVFRRLIDIKDEAHYGLTLVSSRKARDAVRWAQTLVS RAVEELER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9610; Mature: 9610
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAGIAASDAICARRLGLIHRGDDHRTASGLLATATPDGAKLSQVFRRLIDIKDEAHYGL CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCC TLVSSRKARDAVRWAQTLVSRAVEELER HHHCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLAGIAASDAICARRLGLIHRGDDHRTASGLLATATPDGAKLSQVFRRLIDIKDEAHYGL CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCC TLVSSRKARDAVRWAQTLVSRAVEELER HHHCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA