Definition | Nocardioides sp. JS614 chromosome, complete genome. |
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Accession | NC_008699 |
Length | 4,985,871 |
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The map label for this gene is 119717435
Identifier: 119717435
GI number: 119717435
Start: 3410122
End: 3411189
Strand: Reverse
Name: 119717435
Synonym: Noca_3211
Alternate gene names: NA
Gene position: 3411189-3410122 (Counterclockwise)
Preceding gene: 119717437
Following gene: 119717434
Centisome position: 68.42
GC content: 66.76
Gene sequence:
>1068_bases GTGCAGCATCGTCGGGGGCCGCTCGTCGGCGAGCCAGCCGCGCACCAGATCGAGGTCGGCGGCGCGCCGCGCCGGGCCGG TCGTCCAGGCTGCGCCGTACCGGCCCTGTTCCACCCCGACGCCGTGGCGATCGAGGGCGGCGGTGAACGCCGCTCCGGGC TGCGTCGCCGAGGTCCACTCCCGCATCGGCTCGCCGAGCACCTGCGCATAGACGGTCGCGAGGTACGGCAGCTCCAGGGT GTGTGTCCCGGCGTCGCGGTCGTCGCGATGACGAACGGCGCCTGGTCGTCCGGTGGCACGACTCAGGTTGGGTATCCAAG AAGAGCCGGACTTATACTATTAGATATGGACCTATCTGATCCGACGCGAGCCGTGGTGCCAACTCTCGACGGTCCCGTGC TGGCTGTCCTAGCTACTGCTGGCCGGCCGTTGACGGTGGGCCAGGTCGCGGCGGAGGTGGCGCGAGGGTCCGAGATCGGT GTCCGGCGAAGCCTCGCGCGACTCGTGGAGCAGGGCACGGTCCGGGCCACCTTGATGGGACGAAACCAGGTCCACGAACT CAATCGCGACCATGTCGCTGCTCAGGTCGCGGTGCTCTTGGCAGGGCTCAGGCTCGACCTGTGGGAGCGGTTCCGGACCG AGTTGAAGTCATGGAAGGTCCGCCCGCTCTACGCCGCAGTCTTCGGCTCTGCGGCGCGAGGTGATGGAGGTGTCGACAGC GACATCGACCTGCTCGTCGTCCACCAGGTGTTTCCTGGTGAGACGAGGCCGAAGAGCATCCGCAGCGACATCCGAAGTCA GGTTGCGGACGGAGCAGGCGCCGTGACTCTGAGCGCCACTGATCGAGATGCGGACAAGCGTTGGGAGAGCCAACTTGCCG ATCTGCACGACCGGGTCGAGCGCTGGACCGGCAACCCACTGCAGATCGTCGACCTCTCCTTCTATGAATGGCGCCATCCG CCTCAGGAGTATCAGCCTCTGCTGTCCGATGTCCGTCGCGACGGAGTCGAGCTGGTCAAGGCGCGCGGACTCACGATCTG GACCACCATGGACTCAGCCGATGGCTAA
Upstream 100 bases:
>100_bases ACCTTCGCCTGCTCGGTCTGGAACCGGAGCCGCTCGGCCTAGCTACGCGTCGAACCGGTCGCGGACCGAAGATCGGCACC GGCCCCCACGGAGCGGCGCG
Downstream 100 bases:
>100_bases GCCGCCGCGGACCCGTGCAGCCGACAATGAGGATGCTCGGACGCGGGCTCAAGCGGCCGTCGCGTACCTCGAGGTCGCCA GTCTCGTTCTCGATGATGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MQHRRGPLVGEPAAHQIEVGGAPRRAGRPGCAVPALFHPDAVAIEGGGERRSGLRRRGPLPHRLAEHLRIDGREVRQLQG VCPGVAVVAMTNGAWSSGGTTQVGYPRRAGLILLDMDLSDPTRAVVPTLDGPVLAVLATAGRPLTVGQVAAEVARGSEIG VRRSLARLVEQGTVRATLMGRNQVHELNRDHVAAQVAVLLAGLRLDLWERFRTELKSWKVRPLYAAVFGSAARGDGGVDS DIDLLVVHQVFPGETRPKSIRSDIRSQVADGAGAVTLSATDRDADKRWESQLADLHDRVERWTGNPLQIVDLSFYEWRHP PQEYQPLLSDVRRDGVELVKARGLTIWTTMDSADG
Sequences:
>Translated_355_residues MQHRRGPLVGEPAAHQIEVGGAPRRAGRPGCAVPALFHPDAVAIEGGGERRSGLRRRGPLPHRLAEHLRIDGREVRQLQG VCPGVAVVAMTNGAWSSGGTTQVGYPRRAGLILLDMDLSDPTRAVVPTLDGPVLAVLATAGRPLTVGQVAAEVARGSEIG VRRSLARLVEQGTVRATLMGRNQVHELNRDHVAAQVAVLLAGLRLDLWERFRTELKSWKVRPLYAAVFGSAARGDGGVDS DIDLLVVHQVFPGETRPKSIRSDIRSQVADGAGAVTLSATDRDADKRWESQLADLHDRVERWTGNPLQIVDLSFYEWRHP PQEYQPLLSDVRRDGVELVKARGLTIWTTMDSADG >Mature_355_residues MQHRRGPLVGEPAAHQIEVGGAPRRAGRPGCAVPALFHPDAVAIEGGGERRSGLRRRGPLPHRLAEHLRIDGREVRQLQG VCPGVAVVAMTNGAWSSGGTTQVGYPRRAGLILLDMDLSDPTRAVVPTLDGPVLAVLATAGRPLTVGQVAAEVARGSEIG VRRSLARLVEQGTVRATLMGRNQVHELNRDHVAAQVAVLLAGLRLDLWERFRTELKSWKVRPLYAAVFGSAARGDGGVDS DIDLLVVHQVFPGETRPKSIRSDIRSQVADGAGAVTLSATDRDADKRWESQLADLHDRVERWTGNPLQIVDLSFYEWRHP PQEYQPLLSDVRRDGVELVKARGLTIWTTMDSADG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38547; Mature: 38547
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQHRRGPLVGEPAAHQIEVGGAPRRAGRPGCAVPALFHPDAVAIEGGGERRSGLRRRGPL CCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEECCCEEEEECCCHHHHCHHHCCCC PHRLAEHLRIDGREVRQLQGVCPGVAVVAMTNGAWSSGGTTQVGYPRRAGLILLDMDLSD HHHHHHHHCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCC PTRAVVPTLDGPVLAVLATAGRPLTVGQVAAEVARGSEIGVRRSLARLVEQGTVRATLMG CCCEECCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEC RNQVHELNRDHVAAQVAVLLAGLRLDLWERFRTELKSWKVRPLYAAVFGSAARGDGGVDS CHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCC DIDLLVVHQVFPGETRPKSIRSDIRSQVADGAGAVTLSATDRDADKRWESQLADLHDRVE CCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHH RWTGNPLQIVDLSFYEWRHPPQEYQPLLSDVRRDGVELVKARGLTIWTTMDSADG HHCCCCEEEEEECHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCC >Mature Secondary Structure MQHRRGPLVGEPAAHQIEVGGAPRRAGRPGCAVPALFHPDAVAIEGGGERRSGLRRRGPL CCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEECCCEEEEECCCHHHHCHHHCCCC PHRLAEHLRIDGREVRQLQGVCPGVAVVAMTNGAWSSGGTTQVGYPRRAGLILLDMDLSD HHHHHHHHCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCC PTRAVVPTLDGPVLAVLATAGRPLTVGQVAAEVARGSEIGVRRSLARLVEQGTVRATLMG CCCEECCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEC RNQVHELNRDHVAAQVAVLLAGLRLDLWERFRTELKSWKVRPLYAAVFGSAARGDGGVDS CHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCC DIDLLVVHQVFPGETRPKSIRSDIRSQVADGAGAVTLSATDRDADKRWESQLADLHDRVE CCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHH RWTGNPLQIVDLSFYEWRHPPQEYQPLLSDVRRDGVELVKARGLTIWTTMDSADG HHCCCCEEEEEECHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA