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The map label for this gene is rimP

Identifier: 119717417

GI number: 119717417

Start: 3392861

End: 3393388

Strand: Reverse

Name: rimP

Synonym: Noca_3193

Alternate gene names: 119717417

Gene position: 3393388-3392861 (Counterclockwise)

Preceding gene: 119717420

Following gene: 119717416

Centisome position: 68.06

GC content: 72.73

Gene sequence:

>528_bases
GTGAGCAGTGCCAACCAGGACGCCACCCGGGGCCAGATCGAGGCCGAGCTCGACGACCCCCTGCGTGCCCTGGGCCTCGA
CATCGAGGCCGTCGAGATCACCCCCGCCGGCAAGCGGCGGATCCTGCGCGTCGCCGTCGACAAGGACGGCGGGGTCACGC
TGGACGAGGTCGCCGAGGCGACTCGCGAGGTCAACCGGGTGCTCGACGGCTCCGAGGTGATGGGCGAGCAGCCCTACACG
CTCGAGGTCACCTCGCGGGGTGTCGACCGGCCGCTGACCCTGCCCCGGCACTGGCGGCGCAACGCCGGCCGCCTGGTGAA
GGTCGCCTTCGCCGACGGTCGGGCGGCCACCGGACGGATCCTCGACAGCAACGAGGAGCAGGTCACGCTCGACGTCGGCG
GCACGCGCCAGCAGGTCGCCTACGCCGAGGTGAAGAAGGCGCTGGTGCAGGTCGAGTTCAACCGGCCCACGGACGGGCCG
GGCGATGACGGAGACGACGGCGGAGACGACGAGGCGGGGGAGGCCTGA

Upstream 100 bases:

>100_bases
GCGGGCGAGACGAGGACCGGCGGGCACGGCGAAGACCCTACCGAGACCGGCCAGCCGCTATCGTTGACGATCAACAACAG
CACAAGGAGGTCGCCCACTC

Downstream 100 bases:

>100_bases
TGGACATCGACATGAGCATCCTGCGGATGCTCGAGCGGGAGAAGGAGATCTCCTTCGACGTGCTCGTCGAGGCGATCGAG
CAGGCCCTGCTCACGGCGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 174

Protein sequence:

>175_residues
MSSANQDATRGQIEAELDDPLRALGLDIEAVEITPAGKRRILRVAVDKDGGVTLDEVAEATREVNRVLDGSEVMGEQPYT
LEVTSRGVDRPLTLPRHWRRNAGRLVKVAFADGRAATGRILDSNEEQVTLDVGGTRQQVAYAEVKKALVQVEFNRPTDGP
GDDGDDGGDDEAGEA

Sequences:

>Translated_175_residues
MSSANQDATRGQIEAELDDPLRALGLDIEAVEITPAGKRRILRVAVDKDGGVTLDEVAEATREVNRVLDGSEVMGEQPYT
LEVTSRGVDRPLTLPRHWRRNAGRLVKVAFADGRAATGRILDSNEEQVTLDVGGTRQQVAYAEVKKALVQVEFNRPTDGP
GDDGDDGGDDEAGEA
>Mature_174_residues
SSANQDATRGQIEAELDDPLRALGLDIEAVEITPAGKRRILRVAVDKDGGVTLDEVAEATREVNRVLDGSEVMGEQPYTL
EVTSRGVDRPLTLPRHWRRNAGRLVKVAFADGRAATGRILDSNEEQVTLDVGGTRQQVAYAEVKKALVQVEFNRPTDGPG
DDGDDGGDDEAGEA

Specific function: Required for maturation of 30S ribosomal subunits

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family

Homologues:

Organism=Escherichia coli, GI226510978, Length=151, Percent_Identity=29.1390728476821, Blast_Score=64, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIMP_NOCSJ (A1SLL0)

Other databases:

- EMBL:   CP000509
- RefSeq:   YP_924382.1
- ProteinModelPortal:   A1SLL0
- SMR:   A1SLL0
- STRING:   A1SLL0
- GeneID:   4599056
- GenomeReviews:   CP000509_GR
- KEGG:   nca:Noca_3193
- eggNOG:   COG0779
- HOGENOM:   HBG668072
- OMA:   AGEYQLE
- PhylomeDB:   A1SLL0
- ProtClustDB:   PRK00092
- BioCyc:   NSP35761:NOCA_3193-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01077
- InterPro:   IPR003728

Pfam domain/function: PF02576 DUF150

EC number: NA

Molecular weight: Translated: 18837; Mature: 18706

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSANQDATRGQIEAELDDPLRALGLDIEAVEITPAGKRRILRVAVDKDGGVTLDEVAEA
CCCCCCCCCCCEEEECCCCHHHHHCCCEEEEEECCCCCCEEEEEEECCCCCEEHHHHHHH
TREVNRVLDGSEVMGEQPYTLEVTSRGVDRPLTLPRHWRRNAGRLVKVAFADGRAATGRI
HHHHHHHCCCHHHHCCCCEEEEEECCCCCCCCCCCHHHHCCCCCEEEEEEECCCCCCCEE
LDSNEEQVTLDVGGTRQQVAYAEVKKALVQVEFNRPTDGPGDDGDDGGDDEAGEA
ECCCCCEEEEEECCCHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SSANQDATRGQIEAELDDPLRALGLDIEAVEITPAGKRRILRVAVDKDGGVTLDEVAEA
CCCCCCCCCCEEEECCCCHHHHHCCCEEEEEECCCCCCEEEEEEECCCCCEEHHHHHHH
TREVNRVLDGSEVMGEQPYTLEVTSRGVDRPLTLPRHWRRNAGRLVKVAFADGRAATGRI
HHHHHHHCCCHHHHCCCCEEEEEECCCCCCCCCCCHHHHCCCCCEEEEEEECCCCCCCEE
LDSNEEQVTLDVGGTRQQVAYAEVKKALVQVEFNRPTDGPGDDGDDGGDDEAGEA
ECCCCCEEEEEECCCHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA