Definition | Nocardioides sp. JS614 chromosome, complete genome. |
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Accession | NC_008699 |
Length | 4,985,871 |
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The map label for this gene is paaA [H]
Identifier: 119717383
GI number: 119717383
Start: 3358672
End: 3359592
Strand: Reverse
Name: paaA [H]
Synonym: Noca_3159
Alternate gene names: 119717383
Gene position: 3359592-3358672 (Counterclockwise)
Preceding gene: 119717388
Following gene: 119717382
Centisome position: 67.38
GC content: 71.12
Gene sequence:
>921_bases GTGTCCTTCGAGGAGCTGCTGGCCGACGACGGCCGGGTCGAGCCGCGTGACGAGATGCCCGACGCCTACCGCCGCACGCT GGTGCGCCAGATCGCCCAGCACGCGCACTCCGAGATCATCGGCATGCAGCCGGAGGGCAACTGGATCAGCCGGGCGCCCA GCCTGCGCCGCAAGGCGATCCTGATGGCCAAGGTGCAGGACGAGGCCGGGCACGGGCTCTACCTGTACGCCGCGGCCGAG ACGCTCGGCGTGGACCGCGAGGATCTGCTCGACGAGCTGCACACCGGCCGGCAGAAGTACTCCTCGATCTTCAACTACCC GACCCTCACCTGGGCCGACGTCGGTGCGATCGGCTGGCTGGTCGACGGTGCCGCGATCGTCAACCAGGTCCCGCTGTGCC GCTGCTCCTACGGCCCCTACGCCCGGGCCATGGTCCGGGTCTGCAAGGAGGAGTCCTTCCACCAGCGGCAGGGCTTCGAG ATCCTCCACACGCTCTCCCACGGGACCCCCGCCCAGAAGGCGATGGCCCAGGACGCGGTCGACCGGTACTGGTGGCCGGC GCTGATGATGTTCGGGCCGCCGGACGCCGACTCGCCCCACTCCGCGCAGTCGATGGCCTGGGGGATCAAGCGGTTCTCCA ACGACGAGCTGCGCCAGCGGTTCATCGACATGACCGTCCCGCAGTCCGAGGCGCTCGGGCTGACCCTGCCCGACCCCGAG CTGCGCTGGAACGAGGAGCGCGGCCACTACGACTCCGGCGCGATCGACTTCACCGAGCTGACCGAGGTGATCTCGGGGCG CGGGCCCTGCAACGCGCAACGGATGGCCCACCGGGTCAAGGCGCACGAGGACGGCGCCTGGGTCCGCGAGGCGGCCTCGG CGTACGCCGCCAAGCAGGCCGCGCGCGAGGGGGCCGCATGA
Upstream 100 bases:
>100_bases CCCGGGGTGCTCATGCCGCCATCCTGACAGCCCCTCTGTGGTGTTACGGCGGCGCGTTCGGTGGGCTGTGATCTGTAACA CTCGATGGTAGGTTGCCGGT
Downstream 100 bases:
>100_bases GGGACTGGCCGCTGTGGGAGGTCTTCGTGCGCTCGCGTCGAGGGCTCTCGCACGTCCACGTCGGCTCCCTCCATGCCCCC GACGCGGAGTTGGCACTGCG
Product: phenylacetate-CoA oxygenase subunit PaaA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MSFEELLADDGRVEPRDEMPDAYRRTLVRQIAQHAHSEIIGMQPEGNWISRAPSLRRKAILMAKVQDEAGHGLYLYAAAE TLGVDREDLLDELHTGRQKYSSIFNYPTLTWADVGAIGWLVDGAAIVNQVPLCRCSYGPYARAMVRVCKEESFHQRQGFE ILHTLSHGTPAQKAMAQDAVDRYWWPALMMFGPPDADSPHSAQSMAWGIKRFSNDELRQRFIDMTVPQSEALGLTLPDPE LRWNEERGHYDSGAIDFTELTEVISGRGPCNAQRMAHRVKAHEDGAWVREAASAYAAKQAAREGAA
Sequences:
>Translated_306_residues MSFEELLADDGRVEPRDEMPDAYRRTLVRQIAQHAHSEIIGMQPEGNWISRAPSLRRKAILMAKVQDEAGHGLYLYAAAE TLGVDREDLLDELHTGRQKYSSIFNYPTLTWADVGAIGWLVDGAAIVNQVPLCRCSYGPYARAMVRVCKEESFHQRQGFE ILHTLSHGTPAQKAMAQDAVDRYWWPALMMFGPPDADSPHSAQSMAWGIKRFSNDELRQRFIDMTVPQSEALGLTLPDPE LRWNEERGHYDSGAIDFTELTEVISGRGPCNAQRMAHRVKAHEDGAWVREAASAYAAKQAAREGAA >Mature_305_residues SFEELLADDGRVEPRDEMPDAYRRTLVRQIAQHAHSEIIGMQPEGNWISRAPSLRRKAILMAKVQDEAGHGLYLYAAAET LGVDREDLLDELHTGRQKYSSIFNYPTLTWADVGAIGWLVDGAAIVNQVPLCRCSYGPYARAMVRVCKEESFHQRQGFEI LHTLSHGTPAQKAMAQDAVDRYWWPALMMFGPPDADSPHSAQSMAWGIKRFSNDELRQRFIDMTVPQSEALGLTLPDPEL RWNEERGHYDSGAIDFTELTEVISGRGPCNAQRMAHRVKAHEDGAWVREAASAYAAKQAAREGAA
Specific function: May be part of a multicomponent oxygenase involved in phenylacetyl-CoA hydroxylation [H]
COG id: COG3396
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787654, Length=303, Percent_Identity=68.6468646864686, Blast_Score=450, Evalue=1e-128,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR011881 - InterPro: IPR007814 [H]
Pfam domain/function: PF05138 PaaA_PaaC [H]
EC number: NA
Molecular weight: Translated: 34295; Mature: 34164
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFEELLADDGRVEPRDEMPDAYRRTLVRQIAQHAHSEIIGMQPEGNWISRAPSLRRKAI CCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCHHHCCHHHHHHHH LMAKVQDEAGHGLYLYAAAETLGVDREDLLDELHTGRQKYSSIFNYPTLTWADVGAIGWL HHHHHHCCCCCCEEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH VDGAAIVNQVPLCRCSYGPYARAMVRVCKEESFHQRQGFEILHTLSHGTPAQKAMAQDAV HHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH DRYWWPALMMFGPPDADSPHSAQSMAWGIKRFSNDELRQRFIDMTVPQSEALGLTLPDPE HHHHHHHHHEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCC LRWNEERGHYDSGAIDFTELTEVISGRGPCNAQRMAHRVKAHEDGAWVREAASAYAAKQA CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH AREGAA HHCCCC >Mature Secondary Structure SFEELLADDGRVEPRDEMPDAYRRTLVRQIAQHAHSEIIGMQPEGNWISRAPSLRRKAI CHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCHHHCCHHHHHHHH LMAKVQDEAGHGLYLYAAAETLGVDREDLLDELHTGRQKYSSIFNYPTLTWADVGAIGWL HHHHHHCCCCCCEEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH VDGAAIVNQVPLCRCSYGPYARAMVRVCKEESFHQRQGFEILHTLSHGTPAQKAMAQDAV HHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH DRYWWPALMMFGPPDADSPHSAQSMAWGIKRFSNDELRQRFIDMTVPQSEALGLTLPDPE HHHHHHHHHEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCC LRWNEERGHYDSGAIDFTELTEVISGRGPCNAQRMAHRVKAHEDGAWVREAASAYAAKQA CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH AREGAA HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9748275; 9278503; 10766858 [H]