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The map label for this gene is ctaC [H]

Identifier: 119717365

GI number: 119717365

Start: 3344177

End: 3345151

Strand: Reverse

Name: ctaC [H]

Synonym: Noca_3141

Alternate gene names: 119717365

Gene position: 3345151-3344177 (Counterclockwise)

Preceding gene: 119717368

Following gene: 119717364

Centisome position: 67.09

GC content: 67.28

Gene sequence:

>975_bases
GTGTTCGGCTTATCCGTGTTCGTTGAGAGAGAGGCTCAGGTGTTGAGTCTGCAACTCCCCAAGCGCGCCGCCGGCAGCCG
CGGGACCGCCCGTCGGGTGGCCGCCCTGGCAGCGATCGGCGTGGGCGTCCTGGTCCTCGGTGGCTGCTCGTCCGAGACCC
AGGGCGAGTGGAAGCGATTGGCGATGCCCGACCCGGCGTCGGAGCAGGGCGAGCAGGTGCTCAACCTGTGGCAGGGCGCC
TGGATCGCGGCGCTCGTGACCGGTGTCATCGTGTGGGGCCTGATCTTCTACGCGATCTGGCGGTTCCGCCGGCGCAGCGA
GGACGAGATCCCCGTCCAGACCCGCTACAACCTGCCGCTCGAGATCTTCTACACGATCGCGCCGATCATCATGGTGATCG
TCTTCTTCGCGCACACGGTCAAGGTCCAGAACGCCATCCTCGACGACGACCTCCCGGTCGACAACACGATCGAGGTCGTC
GGCCAGCAGTGGTCGTGGACCTTCAACTACGGCATCGGTGAGCAGGACGCGTCGGCCAACGACGACGCGACCGACGACGT
CTTCGCGTACTCCTCCTACGTCCACGAGGCCGGCACCGGCTCCTACATCCCGACCCTGGTGCTGCCGGTGGGGGAGACCA
CCCGCTTCAACCTCCACTCCCCGGACGTGATCCACGACCTGAGCGTCCCGGCGTTCCTGCTGAAGATGGACGTGGTCCCG
GGCCGGGTGAACCACTACGAGATCACCCCGACCCGGATCGGCGAGTACGCCGGCAAGTGCTTCGAGCTCTGCGGCGTCTA
CCACTCGCGGATGCTCTTCAACGTCAAGGTCGTCAGCGCCGACGACTACCAGACCTACCTCCAGCAGCTCCAGGACGCCG
GTGCGACGTCGCAGGCGCCGCTGCTGGGCGGCGAGTACGCCAGCACGCAGGCCGGACTCGACTCCGGCGACCAGTCCGAG
GAGGGCGCGGAGTGA

Upstream 100 bases:

>100_bases
CTATCCGTCCCGTCCGCGGCCGGCAGGCCGGGTACAAAGTCCCGGGACTCGGCGTGGCACCAGGGGGCCCCACCGGGTCT
TAGGTCCCGGGATTCCGCTA

Downstream 100 bases:

>100_bases
CCGCCACCGCTGCACCGTCGACCACCATCACGGCACGCCCGCCGCTGGGTCAGCAGCTCGCGCGCATCATGACGACGACC
GATCACAAGGTGATCGGCAA

Product: cytochrome c oxidase subunit II

Products: NA

Alternate protein names: Cytochrome aa3 subunit 2; Cytochrome c oxidase polypeptide II [H]

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MFGLSVFVEREAQVLSLQLPKRAAGSRGTARRVAALAAIGVGVLVLGGCSSETQGEWKRLAMPDPASEQGEQVLNLWQGA
WIAALVTGVIVWGLIFYAIWRFRRRSEDEIPVQTRYNLPLEIFYTIAPIIMVIVFFAHTVKVQNAILDDDLPVDNTIEVV
GQQWSWTFNYGIGEQDASANDDATDDVFAYSSYVHEAGTGSYIPTLVLPVGETTRFNLHSPDVIHDLSVPAFLLKMDVVP
GRVNHYEITPTRIGEYAGKCFELCGVYHSRMLFNVKVVSADDYQTYLQQLQDAGATSQAPLLGGEYASTQAGLDSGDQSE
EGAE

Sequences:

>Translated_324_residues
MFGLSVFVEREAQVLSLQLPKRAAGSRGTARRVAALAAIGVGVLVLGGCSSETQGEWKRLAMPDPASEQGEQVLNLWQGA
WIAALVTGVIVWGLIFYAIWRFRRRSEDEIPVQTRYNLPLEIFYTIAPIIMVIVFFAHTVKVQNAILDDDLPVDNTIEVV
GQQWSWTFNYGIGEQDASANDDATDDVFAYSSYVHEAGTGSYIPTLVLPVGETTRFNLHSPDVIHDLSVPAFLLKMDVVP
GRVNHYEITPTRIGEYAGKCFELCGVYHSRMLFNVKVVSADDYQTYLQQLQDAGATSQAPLLGGEYASTQAGLDSGDQSE
EGAE
>Mature_324_residues
MFGLSVFVEREAQVLSLQLPKRAAGSRGTARRVAALAAIGVGVLVLGGCSSETQGEWKRLAMPDPASEQGEQVLNLWQGA
WIAALVTGVIVWGLIFYAIWRFRRRSEDEIPVQTRYNLPLEIFYTIAPIIMVIVFFAHTVKVQNAILDDDLPVDNTIEVV
GQQWSWTFNYGIGEQDASANDDATDDVFAYSSYVHEAGTGSYIPTLVLPVGETTRFNLHSPDVIHDLSVPAFLLKMDVVP
GRVNHYEITPTRIGEYAGKCFELCGVYHSRMLFNVKVVSADDYQTYLQQLQDAGATSQAPLLGGEYASTQAGLDSGDQSE
EGAE

Specific function: Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) [H]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 2 family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6226540, Length=239, Percent_Identity=27.6150627615063, Blast_Score=81, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001505
- InterPro:   IPR008972
- InterPro:   IPR014222
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759 [H]

Pfam domain/function: PF00116 COX2 [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 35572; Mature: 35572

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: PS00078 COX2 ; PS50999 COX2_TM ; PS50857 COX2_CUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGLSVFVEREAQVLSLQLPKRAAGSRGTARRVAALAAIGVGVLVLGGCSSETQGEWKRL
CCCCEEEEECCCEEEEEECCHHHCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCCHHCC
AMPDPASEQGEQVLNLWQGAWIAALVTGVIVWGLIFYAIWRFRRRSEDEIPVQTRYNLPL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCH
EIFYTIAPIIMVIVFFAHTVKVQNAILDDDLPVDNTIEVVGQQWSWTFNYGIGEQDASAN
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCEEEEEECCCCCCCCCCC
DDATDDVFAYSSYVHEAGTGSYIPTLVLPVGETTRFNLHSPDVIHDLSVPAFLLKMDVVP
CCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEECCCCCHHHHCCHHHHHHHCCCCC
GRVNHYEITPTRIGEYAGKCFELCGVYHSRMLFNVKVVSADDYQTYLQQLQDAGATSQAP
CCCCEEEECHHHHHHHHHHHHHHHHHHHHCEEEEEEEEECCHHHHHHHHHHHCCCCCCCC
LLGGEYASTQAGLDSGDQSEEGAE
CCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFGLSVFVEREAQVLSLQLPKRAAGSRGTARRVAALAAIGVGVLVLGGCSSETQGEWKRL
CCCCEEEEECCCEEEEEECCHHHCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCCHHCC
AMPDPASEQGEQVLNLWQGAWIAALVTGVIVWGLIFYAIWRFRRRSEDEIPVQTRYNLPL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCH
EIFYTIAPIIMVIVFFAHTVKVQNAILDDDLPVDNTIEVVGQQWSWTFNYGIGEQDASAN
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCEEEEEECCCCCCCCCCC
DDATDDVFAYSSYVHEAGTGSYIPTLVLPVGETTRFNLHSPDVIHDLSVPAFLLKMDVVP
CCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEECCCCCHHHHCCHHHHHHHCCCCC
GRVNHYEITPTRIGEYAGKCFELCGVYHSRMLFNVKVVSADDYQTYLQQLQDAGATSQAP
CCCCEEEECHHHHHHHHHHHHHHHHHHHHCEEEEEEEEECCHHHHHHHHHHHCCCCCCCC
LLGGEYASTQAGLDSGDQSEEGAE
CCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11572948; 12692562 [H]