Definition | Nocardioides sp. JS614 chromosome, complete genome. |
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Accession | NC_008699 |
Length | 4,985,871 |
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The map label for this gene is 119717349
Identifier: 119717349
GI number: 119717349
Start: 3329004
End: 3329237
Strand: Reverse
Name: 119717349
Synonym: Noca_3125
Alternate gene names: NA
Gene position: 3329237-3329004 (Counterclockwise)
Preceding gene: 119717350
Following gene: 119717348
Centisome position: 66.77
GC content: 73.08
Gene sequence:
>234_bases GTGGTCCCTGCGACCGTTCCTGACATGACGACGCGAATCGACTGCGAGACCTGCACGGTGCGGGGTCTGCACTGCCACGA CTGCGTGGTGACCGTGCTGCTCGGGCCGCCTCCCGAGCTCACCTTCGACGACGACGGCCGGCGCGCCCTCGACGTCCTGG CCCGCGGCGGCCTGGTCCCGCCCCTGCGGCTCGTCCAGCCCGTCGACGGCCCACCGGTGGTGGAGTCGGCGTGA
Upstream 100 bases:
>100_bases CCCGGGTGATCTCGTCCGAGGCGCTCGTCGAGGTCCTGACCCGGTAGTCACCTGGTCCGCGCGACACGCCGGGAGGTGGC GCTCCCCGGCGCCGCTGTCG
Downstream 100 bases:
>100_bases GCCCGACGCGGCCAGGCTGTGACTTCTGTGACTCTTGTGACTGGCGTGACTTCTGTGGTCCATCTCGGGTAAAGATCCGG CTGGCGTGACAAGAAATTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 77; Mature: 77
Protein sequence:
>77_residues MVPATVPDMTTRIDCETCTVRGLHCHDCVVTVLLGPPPELTFDDDGRRALDVLARGGLVPPLRLVQPVDGPPVVESA
Sequences:
>Translated_77_residues MVPATVPDMTTRIDCETCTVRGLHCHDCVVTVLLGPPPELTFDDDGRRALDVLARGGLVPPLRLVQPVDGPPVVESA >Mature_77_residues MVPATVPDMTTRIDCETCTVRGLHCHDCVVTVLLGPPPELTFDDDGRRALDVLARGGLVPPLRLVQPVDGPPVVESA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8202; Mature: 8202
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 5.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPATVPDMTTRIDCETCTVRGLHCHDCVVTVLLGPPPELTFDDDGRRALDVLARGGLVP CCCCCCCCCCEEECCCCEEECCCEECCEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCC PLRLVQPVDGPPVVESA CHHEECCCCCCCCCCCC >Mature Secondary Structure MVPATVPDMTTRIDCETCTVRGLHCHDCVVTVLLGPPPELTFDDDGRRALDVLARGGLVP CCCCCCCCCCEEECCCCEEECCCEECCEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCC PLRLVQPVDGPPVVESA CHHEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA