Definition | Nocardioides sp. JS614 chromosome, complete genome. |
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Accession | NC_008699 |
Length | 4,985,871 |
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The map label for this gene is 119717350
Identifier: 119717350
GI number: 119717350
Start: 3329291
End: 3330568
Strand: Reverse
Name: 119717350
Synonym: Noca_3126
Alternate gene names: NA
Gene position: 3330568-3329291 (Counterclockwise)
Preceding gene: 119717351
Following gene: 119717349
Centisome position: 66.8
GC content: 77.86
Gene sequence:
>1278_bases GTGACCGAGCCCGTGCTGCGCTCGCTCGCCGAGCTGCCGGAGCCTGTCCGCGCTCGCGTCGTCGCGATGACCGCGGAGGC GCTGCCGGACGTGCCCCGGCTGCCCGCCGCCGTACGCCGGGTGGCGGGCTTCGCCCCGACCCGCCGCGCGCGCCTGGGCG GGACCGCGATCGCGGGGGCGCTAGCGGACGACGACTTCCGGGCCCGGGTCGGCACCCAGGTCGCCGCCCGGCCCGCCCCG GCCGAGGACGACGCGGCCGCGGTGGCCGCGCACCGGTGGCTGACCCGGGCCGAGGGGTGGGAGACCGAGCTGGAGGACGC CGTACGACGCATGTCCGAGCGCTCCGCTCCCGCTCGGCCGGACCCCGACGACCATGAGCTCGAGCGACTGCGCGGCCGGC TCGCCGACGCCGAGCAGACGCTGCGCGACCTGCGGGCCGCACACCGATCTGAGATCGGCGAGTACAAGACCGAGAACGCA GCGTTGCGGCGCAAGCTCGGGGACACCCGGGCCGCCGAGCGCGAGGCGCGCGCGGCGGCCGACGAGGCCGGCCAGGCGCA GCAGGCCGCGGAGGCCCTGGCTGCGGAGCGGTGTGCGGTGCTGGAGAAGGACAACCGGCGGCTGCGCGGGCAGCTGGAGC GGCTCGAGGCGGAGGCCGCCCGGGGCCGGCGCGACGCCCGCTCGGAGCGCGACGACGCCACGTTGCGCGCGCGGATGCTC CTCGACACCGTGATCGACGCGGCCGCGGGCCTGCGCCGCGAGCTGGCCCTGCCGCCGGTCGCCGGGGCGCCCGGGGACCG CGTGGAGGCCGACGTGGCCGCGGCGGGGACCCGGGAGCCGAGCGCGGCGGGCGCGCTCGGGACCTCCAGCGCCGCGCTGC TCGAGCAGTACCTCGCGATGCCCCGGGCCCGGCTCCTCATCGACGGCTACAACGTGACCAAGACCGCCTGGCCGACGACA CCCCTCGAGGCGCAGCGCAACCGCCTGGTCACCGCGCTCGCCCCCCTGGTCGCCCGGACCCGGGCAGAGACGACCGTGGT GTTCGACGCGGCGGACACCGACCACCGTCCCCTGGTGCACACGCCACGGGGCGTCAAGGTGCTCTTCAGCCCGCGCGGGG TGATCGCCGACGACGTGCTCCGCGACCTGGTGGCCGTCGAGCCCGAGGGCCGGGTGGTGGTCGTCGTCACCGGTGACCGG GCGGTCGCCGAGGACGTCGCCCGCAGTGGCGCCCGGGTGATCTCGTCCGAGGCGCTCGTCGAGGTCCTGACCCGGTAG
Upstream 100 bases:
>100_bases TGTCGCTGGTGCGGCCGCTCCGACGCGATCGAGGTGGTGTCGCGGCACCCGGTCGAGGAGCCGGCGGGCGCGGACTCCGG GCCGAGCTGACGGGCCGGCC
Downstream 100 bases:
>100_bases TCACCTGGTCCGCGCGACACGCCGGGAGGTGGCGCTCCCCGGCGCCGCTGTCGGTGGTCCCTGCGACCGTTCCTGACATG ACGACGCGAATCGACTGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 425; Mature: 424
Protein sequence:
>425_residues MTEPVLRSLAELPEPVRARVVAMTAEALPDVPRLPAAVRRVAGFAPTRRARLGGTAIAGALADDDFRARVGTQVAARPAP AEDDAAAVAAHRWLTRAEGWETELEDAVRRMSERSAPARPDPDDHELERLRGRLADAEQTLRDLRAAHRSEIGEYKTENA ALRRKLGDTRAAEREARAAADEAGQAQQAAEALAAERCAVLEKDNRRLRGQLERLEAEAARGRRDARSERDDATLRARML LDTVIDAAAGLRRELALPPVAGAPGDRVEADVAAAGTREPSAAGALGTSSAALLEQYLAMPRARLLIDGYNVTKTAWPTT PLEAQRNRLVTALAPLVARTRAETTVVFDAADTDHRPLVHTPRGVKVLFSPRGVIADDVLRDLVAVEPEGRVVVVVTGDR AVAEDVARSGARVISSEALVEVLTR
Sequences:
>Translated_425_residues MTEPVLRSLAELPEPVRARVVAMTAEALPDVPRLPAAVRRVAGFAPTRRARLGGTAIAGALADDDFRARVGTQVAARPAP AEDDAAAVAAHRWLTRAEGWETELEDAVRRMSERSAPARPDPDDHELERLRGRLADAEQTLRDLRAAHRSEIGEYKTENA ALRRKLGDTRAAEREARAAADEAGQAQQAAEALAAERCAVLEKDNRRLRGQLERLEAEAARGRRDARSERDDATLRARML LDTVIDAAAGLRRELALPPVAGAPGDRVEADVAAAGTREPSAAGALGTSSAALLEQYLAMPRARLLIDGYNVTKTAWPTT PLEAQRNRLVTALAPLVARTRAETTVVFDAADTDHRPLVHTPRGVKVLFSPRGVIADDVLRDLVAVEPEGRVVVVVTGDR AVAEDVARSGARVISSEALVEVLTR >Mature_424_residues TEPVLRSLAELPEPVRARVVAMTAEALPDVPRLPAAVRRVAGFAPTRRARLGGTAIAGALADDDFRARVGTQVAARPAPA EDDAAAVAAHRWLTRAEGWETELEDAVRRMSERSAPARPDPDDHELERLRGRLADAEQTLRDLRAAHRSEIGEYKTENAA LRRKLGDTRAAEREARAAADEAGQAQQAAEALAAERCAVLEKDNRRLRGQLERLEAEAARGRRDARSERDDATLRARMLL DTVIDAAAGLRRELALPPVAGAPGDRVEADVAAAGTREPSAAGALGTSSAALLEQYLAMPRARLLIDGYNVTKTAWPTTP LEAQRNRLVTALAPLVARTRAETTVVFDAADTDHRPLVHTPRGVKVLFSPRGVIADDVLRDLVAVEPEGRVVVVVTGDRA VAEDVARSGARVISSEALVEVLTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45737; Mature: 45606
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEPVLRSLAELPEPVRARVVAMTAEALPDVPRLPAAVRRVAGFAPTRRARLGGTAIAGA CCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHCCCHHHHHH LADDDFRARVGTQVAARPAPAEDDAAAVAAHRWLTRAEGWETELEDAVRRMSERSAPARP HCCCHHHHHHCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCC DPDDHELERLRGRLADAEQTLRDLRAAHRSEIGEYKTENAALRRKLGDTRAAEREARAAA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH DEAGQAQQAAEALAAERCAVLEKDNRRLRGQLERLEAEAARGRRDARSERDDATLRARML HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHHH LDTVIDAAAGLRRELALPPVAGAPGDRVEADVAAAGTREPSAAGALGTSSAALLEQYLAM HHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHC PRARLLIDGYNVTKTAWPTTPLEAQRNRLVTALAPLVARTRAETTVVFDAADTDHRPLVH CCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEE TPRGVKVLFSPRGVIADDVLRDLVAVEPEGRVVVVVTGDRAVAEDVARSGARVISSEALV CCCCCEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHCCHHHHHHHHHH EVLTR HHHCC >Mature Secondary Structure TEPVLRSLAELPEPVRARVVAMTAEALPDVPRLPAAVRRVAGFAPTRRARLGGTAIAGA CCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHCCCHHHHHH LADDDFRARVGTQVAARPAPAEDDAAAVAAHRWLTRAEGWETELEDAVRRMSERSAPARP HCCCHHHHHHCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCC DPDDHELERLRGRLADAEQTLRDLRAAHRSEIGEYKTENAALRRKLGDTRAAEREARAAA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH DEAGQAQQAAEALAAERCAVLEKDNRRLRGQLERLEAEAARGRRDARSERDDATLRARML HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHHH LDTVIDAAAGLRRELALPPVAGAPGDRVEADVAAAGTREPSAAGALGTSSAALLEQYLAM HHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHC PRARLLIDGYNVTKTAWPTTPLEAQRNRLVTALAPLVARTRAETTVVFDAADTDHRPLVH CCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEE TPRGVKVLFSPRGVIADDVLRDLVAVEPEGRVVVVVTGDRAVAEDVARSGARVISSEALV CCCCCEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHCCHHHHHHHHHH EVLTR HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA