Definition | Nocardioides sp. JS614 chromosome, complete genome. |
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Accession | NC_008699 |
Length | 4,985,871 |
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The map label for this gene is wecC [H]
Identifier: 119717219
GI number: 119717219
Start: 3185143
End: 3186342
Strand: Reverse
Name: wecC [H]
Synonym: Noca_2995
Alternate gene names: 119717219
Gene position: 3186342-3185143 (Counterclockwise)
Preceding gene: 119717222
Following gene: 119717218
Centisome position: 63.91
GC content: 71.92
Gene sequence:
>1200_bases GTGGCAGATCAGTTCGACTTCGACGTCTGCGTCGTGGGTGGCGGCGGGCACGTCGGGTTCCCGTTGGCGGTCGCGTTCGC CTCCCGGGGGCTCCGGGTGGCGGTCTACGACGTGAACGCGGCGGTCGTCGCGACCATCGCCTCCGGACGCGCCCCGTTCC TCGAGCCCGGGGTCCACGCACCGCTCGCCGACGCGATCGCGTCGGACCGTCTGGTCGCGACGACCGAGCGCGAGGTCGTC CGCCGGGCCGAGCACGTCGTGATCGTGGTCGGCACCCCGGTCGACCAGTACCTCAGCCCCGACCCCGAGGCCGTGCCGCG GGTGGTCGGGGAGCTGGAGGACCTGCTCGTGGCCGGACAGCTGGTCGTGCTCAGGAGCACCGTCTTCCCCGGGGTGACCC GCCGGGTCGAGCAGCTGCTCGCCGGCAGCCACCCCGACGTCGACCTGGCCTTCTGCCCCGAGCGGATCGCCGAGGGCCGG GCCATGACCGAGCTCTTCACGCTGCCGCAGCTGGTGGCTGCGCGCAGCGACCGGCCGATGCAGCGTGCAGCGGCCCTGTT CGGCAAGCTCACCGACACCGTCATCGAGCTGGCGCCCGAGGAGGCGGAGCTCGCGAAGCTGTTCACCAACTCCTGGCGCT ACATCAAGTTCGCGGCCGCCAACCAGTACTACATGATCGCCAACGACCTCGGTCTCGACTTCGCCCGGATCCGCGACGCC ATGACCACGGACTACCCCCGCTCCGCGGACCTGCCGGGCGCGGGGTTCGCCGCCGGCCCCTGCCTGTTCAAGGACACCAT GCAGCTCGCCTCGGTCACCGGGGGCGCCTTCGCGCTCGGCCACTCCGCGATGCTCGTCAACGAGGGCCTCCCCGACTACC TCGTCCGCGGGATGGAGCAACGCCACGACCTCCCGGCGCTCACTGTCGGGATCCTCGGCATGGCGTTCAAGGCCGAGAGC GACGACCGGCGCTCCAGCCTGTCCTACCGGCTCAAGCGGGTGCTGTCCTTCCGCGCCGGCCGCGTCCTGACCACCGACCC CTACGTCGCGGACGACTCCGACCTCCTGCCCCTCGAGCGGGTGCTGTCCGAGGCCGACCTGCTCGTGATCGGGGCGCCGC ACGCGGTCTACCGGGACCTCGAGCCGGCGGTCCCGGTCGTCGACGTGTGGAACCTGCTCGGAATGGGGTCGGCCCTGTGA
Upstream 100 bases:
>100_bases CACCGATGACCCCGGAACCGGGCTGCCCGGCCGCTCCGTCGCGGTAGTTTGGGCGAGACCTCTCGACCCGAGCCGACCGA CCCGACGGAGCAGCAGCAGC
Downstream 100 bases:
>100_bases CGCCCACCGCCGTGTCCGTGATCGTCCCGGCCTACCACGAGGATCAGGGCATCGGACGGGTGCTCGACCGGCTGATCGAC GCCATCACTCTCGACTTCGA
Product: UDP-glucose/GDP-mannose dehydrogenase
Products: UDP-N-acetyl-D-mannosaminuronic-acid; NADH; Proton [C]
Alternate protein names: UDP-ManNAc 6-dehydrogenase [H]
Number of amino acids: Translated: 399; Mature: 398
Protein sequence:
>399_residues MADQFDFDVCVVGGGGHVGFPLAVAFASRGLRVAVYDVNAAVVATIASGRAPFLEPGVHAPLADAIASDRLVATTEREVV RRAEHVVIVVGTPVDQYLSPDPEAVPRVVGELEDLLVAGQLVVLRSTVFPGVTRRVEQLLAGSHPDVDLAFCPERIAEGR AMTELFTLPQLVAARSDRPMQRAAALFGKLTDTVIELAPEEAELAKLFTNSWRYIKFAAANQYYMIANDLGLDFARIRDA MTTDYPRSADLPGAGFAAGPCLFKDTMQLASVTGGAFALGHSAMLVNEGLPDYLVRGMEQRHDLPALTVGILGMAFKAES DDRRSSLSYRLKRVLSFRAGRVLTTDPYVADDSDLLPLERVLSEADLLVIGAPHAVYRDLEPAVPVVDVWNLLGMGSAL
Sequences:
>Translated_399_residues MADQFDFDVCVVGGGGHVGFPLAVAFASRGLRVAVYDVNAAVVATIASGRAPFLEPGVHAPLADAIASDRLVATTEREVV RRAEHVVIVVGTPVDQYLSPDPEAVPRVVGELEDLLVAGQLVVLRSTVFPGVTRRVEQLLAGSHPDVDLAFCPERIAEGR AMTELFTLPQLVAARSDRPMQRAAALFGKLTDTVIELAPEEAELAKLFTNSWRYIKFAAANQYYMIANDLGLDFARIRDA MTTDYPRSADLPGAGFAAGPCLFKDTMQLASVTGGAFALGHSAMLVNEGLPDYLVRGMEQRHDLPALTVGILGMAFKAES DDRRSSLSYRLKRVLSFRAGRVLTTDPYVADDSDLLPLERVLSEADLLVIGAPHAVYRDLEPAVPVVDVWNLLGMGSAL >Mature_398_residues ADQFDFDVCVVGGGGHVGFPLAVAFASRGLRVAVYDVNAAVVATIASGRAPFLEPGVHAPLADAIASDRLVATTEREVVR RAEHVVIVVGTPVDQYLSPDPEAVPRVVGELEDLLVAGQLVVLRSTVFPGVTRRVEQLLAGSHPDVDLAFCPERIAEGRA MTELFTLPQLVAARSDRPMQRAAALFGKLTDTVIELAPEEAELAKLFTNSWRYIKFAAANQYYMIANDLGLDFARIRDAM TTDYPRSADLPGAGFAAGPCLFKDTMQLASVTGGAFALGHSAMLVNEGLPDYLVRGMEQRHDLPALTVGILGMAFKAESD DRRSSLSYRLKRVLSFRAGRVLTTDPYVADDSDLLPLERVLSEADLLVIGAPHAVYRDLEPAVPVVDVWNLLGMGSAL
Specific function: Catalyzes the four-electron oxidation of UDP-N-acetyl-D- mannosamine (UDP-ManNAc), reducing NAD(+) and releasing UDP-N- acetylmannosaminuronic acid (UDP-ManNAcA) [H]
COG id: COG0677
COG function: function code M; UDP-N-acetyl-D-mannosaminuronate dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-glucose/GDP-mannose dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI48994968, Length=406, Percent_Identity=26.8472906403941, Blast_Score=115, Evalue=5e-27, Organism=Escherichia coli, GI1788340, Length=400, Percent_Identity=26.25, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR016040 - InterPro: IPR017476 - InterPro: IPR014027 - InterPro: IPR014026 - InterPro: IPR014028 - InterPro: IPR001732 [H]
Pfam domain/function: PF00984 UDPG_MGDP_dh; PF03720 UDPG_MGDP_dh_C; PF03721 UDPG_MGDP_dh_N [H]
EC number: 1.1.1.- [C]
Molecular weight: Translated: 42942; Mature: 42811
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADQFDFDVCVVGGGGHVGFPLAVAFASRGLRVAVYDVNAAVVATIASGRAPFLEPGVHA CCCCCCCCEEEECCCCCCHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCCCCCCCCCC PLADAIASDRLVATTEREVVRRAEHVVIVVGTPVDQYLSPDPEAVPRVVGELEDLLVAGQ CHHHHHHCCCEEEHHHHHHHHHCCEEEEEEECCHHHHCCCCHHHHHHHHHHHHHHHHHHH LVVLRSTVFPGVTRRVEQLLAGSHPDVDLAFCPERIAEGRAMTELFTLPQLVAARSDRPM HHHHHHHHCHHHHHHHHHHHCCCCCCCCCEECCHHHHCCHHHHHHHHHHHHHHHCCCCHH QRAAALFGKLTDTVIELAPEEAELAKLFTNSWRYIKFAAANQYYMIANDLGLDFARIRDA HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEECCCEEEEECCCCCHHHHHHHH MTTDYPRSADLPGAGFAAGPCLFKDTMQLASVTGGAFALGHSAMLVNEGLPDYLVRGMEQ HCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHCCCEEEECCCCHHHHHHHHHH RHDLPALTVGILGMAFKAESDDRRSSLSYRLKRVLSFRAGRVLTTDPYVADDSDLLPLER HCCCCHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHH VLSEADLLVIGAPHAVYRDLEPAVPVVDVWNLLGMGSAL HHCCCCEEEEECCHHHHHCCCCCCCHHHHHHHHCCCCCC >Mature Secondary Structure ADQFDFDVCVVGGGGHVGFPLAVAFASRGLRVAVYDVNAAVVATIASGRAPFLEPGVHA CCCCCCCEEEECCCCCCHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCCCCCCCCCC PLADAIASDRLVATTEREVVRRAEHVVIVVGTPVDQYLSPDPEAVPRVVGELEDLLVAGQ CHHHHHHCCCEEEHHHHHHHHHCCEEEEEEECCHHHHCCCCHHHHHHHHHHHHHHHHHHH LVVLRSTVFPGVTRRVEQLLAGSHPDVDLAFCPERIAEGRAMTELFTLPQLVAARSDRPM HHHHHHHHCHHHHHHHHHHHCCCCCCCCCEECCHHHHCCHHHHHHHHHHHHHHHCCCCHH QRAAALFGKLTDTVIELAPEEAELAKLFTNSWRYIKFAAANQYYMIANDLGLDFARIRDA HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEECCCEEEEECCCCCHHHHHHHH MTTDYPRSADLPGAGFAAGPCLFKDTMQLASVTGGAFALGHSAMLVNEGLPDYLVRGMEQ HCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHCCCEEEECCCCHHHHHHHHHH RHDLPALTVGILGMAFKAESDDRRSSLSYRLKRVLSFRAGRVLTTDPYVADDSDLLPLER HCCCCHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHH VLSEADLLVIGAPHAVYRDLEPAVPVVDVWNLLGMGSAL HHCCCCEEEEECCHHHHHCCCCCCCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: UDP-N-acetyl-D-mannosamine; NAD [C]
Specific reaction: UDP-N-acetyl-D-mannosamine + NAD = UDP-N-acetyl-D-mannosaminuronic-acid + NADH + Proton [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11586360; 12142430 [H]