Definition | Nocardioides sp. JS614 chromosome, complete genome. |
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Accession | NC_008699 |
Length | 4,985,871 |
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The map label for this gene is 119717218
Identifier: 119717218
GI number: 119717218
Start: 3184376
End: 3185146
Strand: Reverse
Name: 119717218
Synonym: Noca_2994
Alternate gene names: NA
Gene position: 3185146-3184376 (Counterclockwise)
Preceding gene: 119717219
Following gene: 119717217
Centisome position: 63.88
GC content: 70.56
Gene sequence:
>771_bases GTGACGCCCACCGCCGTGTCCGTGATCGTCCCGGCCTACCACGAGGATCAGGGCATCGGACGGGTGCTCGACCGGCTGAT CGACGCCATCACTCTCGACTTCGAGGTGCTCGTGGTCGTCGACGACGAAGAGGACCCCACGGTGGCCGCCGTCCGTGAGC ACGTCCCGGACGATCCTCGCGTGCGGACGCTGGTCAACACCTACGGGCGTGGCCCCGCCAACGCGATCCGCTACGGCATC GACGCGGCTCGCCACCCGGTCGTCGTCGTGACGATGGCCGACGGGAGTGACGACCCCCGGATGATCGACCCGCTCTCCCG GCTCGTCGAGCGGGGCGTCGTCGTCGCCGCGGCCTCGCGCTACTCGCCCGGCGGCCAGCAGGTGGGCGGGCCGATCCTCA AGGGCATGCTGTCGCGCACCGCAGGCCGCACGCTGGGGACCTTCGCTCGCGTCGGCACCGACGACGCCACCAACAGCTTC AAGGCCTTCGACACCGACTTCGTGCGCGAGGTCGGCATCCACAGCCGGAGCGGCTTCGAGATCGGGCTCGAGCTGACGGC GAAGGCCCGGCGGTTGCGCCGCCCGGTCGCCGAGCTGCCGACGATCTGGCTCGACCGCACGGTCGGAGAGTCCAGCTTCG ACCTCAGGGGCTGGATCCCCAAGTACCTGCGCTGGTACCGCTTCGCCTTCGGTCCAGAGCTCACCGTCGAGCAGGTGCGC GCCGAGGGTGCGAGGATCGCTGCTCGCAACGACAGGAGGGGACGTCCGTGA
Upstream 100 bases:
>100_bases ACCTGCTCGTGATCGGGGCGCCGCACGCGGTCTACCGGGACCTCGAGCCGGCGGTCCCGGTCGTCGACGTGTGGAACCTG CTCGGAATGGGGTCGGCCCT
Downstream 100 bases:
>100_bases CCGAGGGAGCGGGCCAGCGGGTCCTGGTGACCGGGTCGGCCGGGTTCATCGGCGGCTATGTCGTGGAGGACCTCCTCCGT CGTGGGTACGCCGTGACCGG
Product: glycosyl transferase family protein
Products: GDP; dolichyl D-mannosyl phosphate
Alternate protein names: Family 2 Glycosyl Transferase; Polyprenol-Phosphate Mannosyltransferase; Apolipoprotein N-Acyltransferase; Glycosyl Transferase
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MTPTAVSVIVPAYHEDQGIGRVLDRLIDAITLDFEVLVVVDDEEDPTVAAVREHVPDDPRVRTLVNTYGRGPANAIRYGI DAARHPVVVVTMADGSDDPRMIDPLSRLVERGVVVAAASRYSPGGQQVGGPILKGMLSRTAGRTLGTFARVGTDDATNSF KAFDTDFVREVGIHSRSGFEIGLELTAKARRLRRPVAELPTIWLDRTVGESSFDLRGWIPKYLRWYRFAFGPELTVEQVR AEGARIAARNDRRGRP
Sequences:
>Translated_256_residues MTPTAVSVIVPAYHEDQGIGRVLDRLIDAITLDFEVLVVVDDEEDPTVAAVREHVPDDPRVRTLVNTYGRGPANAIRYGI DAARHPVVVVTMADGSDDPRMIDPLSRLVERGVVVAAASRYSPGGQQVGGPILKGMLSRTAGRTLGTFARVGTDDATNSF KAFDTDFVREVGIHSRSGFEIGLELTAKARRLRRPVAELPTIWLDRTVGESSFDLRGWIPKYLRWYRFAFGPELTVEQVR AEGARIAARNDRRGRP >Mature_255_residues TPTAVSVIVPAYHEDQGIGRVLDRLIDAITLDFEVLVVVDDEEDPTVAAVREHVPDDPRVRTLVNTYGRGPANAIRYGID AARHPVVVVTMADGSDDPRMIDPLSRLVERGVVVAAASRYSPGGQQVGGPILKGMLSRTAGRTLGTFARVGTDDATNSFK AFDTDFVREVGIHSRSGFEIGLELTAKARRLRRPVAELPTIWLDRTVGESSFDLRGWIPKYLRWYRFAFGPELTVEQVRA EGARIAARNDRRGRP
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4503363, Length=214, Percent_Identity=23.8317757009346, Blast_Score=69, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6325441, Length=240, Percent_Identity=27.9166666666667, Blast_Score=64, Evalue=2e-11, Organism=Drosophila melanogaster, GI24585265, Length=214, Percent_Identity=24.7663551401869, Blast_Score=64, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.4.1.83
Molecular weight: Translated: 28204; Mature: 28073
Theoretical pI: Translated: 7.83; Mature: 7.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPTAVSVIVPAYHEDQGIGRVLDRLIDAITLDFEVLVVVDDEEDPTVAAVREHVPDDPR CCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHCCCCHH VRTLVNTYGRGPANAIRYGIDAARHPVVVVTMADGSDDPRMIDPLSRLVERGVVVAAASR HHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCEEEEECCC YSPGGQQVGGPILKGMLSRTAGRTLGTFARVGTDDATNSFKAFDTDFVREVGIHSRSGFE CCCCCHHCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCE IGLELTAKARRLRRPVAELPTIWLDRTVGESSFDLRGWIPKYLRWYRFAFGPELTVEQVR EEEEHHHHHHHHHCCHHHCCCEEHHCCCCCCCCCHHCCHHHHHHHHHHHCCCCHHHHHHH AEGARIAARNDRRGRP HCCCEEEECCCCCCCC >Mature Secondary Structure TPTAVSVIVPAYHEDQGIGRVLDRLIDAITLDFEVLVVVDDEEDPTVAAVREHVPDDPR CCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHCCCCHH VRTLVNTYGRGPANAIRYGIDAARHPVVVVTMADGSDDPRMIDPLSRLVERGVVVAAASR HHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCEEEEECCC YSPGGQQVGGPILKGMLSRTAGRTLGTFARVGTDDATNSFKAFDTDFVREVGIHSRSGFE CCCCCHHCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCE IGLELTAKARRLRRPVAELPTIWLDRTVGESSFDLRGWIPKYLRWYRFAFGPELTVEQVR EEEEHHHHHHHHHCCHHHCCCEEHHCCCCCCCCCHHCCHHHHHHHHHHHCCCCHHHHHHH AEGARIAARNDRRGRP HCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GDPmannose; dolichyl phosphate
Specific reaction: GDP-mannose + dolichyl phosphate = GDP + dolichyl D-mannosyl phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA