Definition | Nocardioides sp. JS614 chromosome, complete genome. |
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Accession | NC_008699 |
Length | 4,985,871 |
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The map label for this gene is 119717207
Identifier: 119717207
GI number: 119717207
Start: 3170458
End: 3172794
Strand: Reverse
Name: 119717207
Synonym: Noca_2983
Alternate gene names: NA
Gene position: 3172794-3170458 (Counterclockwise)
Preceding gene: 119717209
Following gene: 119717206
Centisome position: 63.64
GC content: 78.78
Gene sequence:
>2337_bases ATGTGCGGCATGCGAAGGCTGCTCGCCGTCTCGGGCGCACTCCTCACCCTGGCGCTCGGCCCGGCGGGGCCGGCTCCGGC ACTCACCCCGCTGGCGCCTGCCGACGAGCCCATCTGCTCGGGGGACCCGGTCTTCGACGCCGCGGGAGTCCTCGACGACG CGCGCATCGAGCGCGCGGCCGCCGCGTTCGGCGACGGGATCGTCGTCAAGGTGCTCAGCTACCGCAGCACCGACGGGCAG GACCTCTACGACCGGATCCGCGACGAACGCGAGCGGTGCGCGGGCTGGGGCTTCCGGCCAGGTCGCGGCGAGTCCCTCCT CGTGCTGGCGGTCGCGACCGAGGACCGGCGGCTCGCCAGCCACTACGACGGCCGGGCCATGGACCGGTTCGAGGCGGCGC GCGAGCACGCCGAGGTCGACGGCATGGGCGCGAGCTTCGGCAACGCCCGCTGGACCCGCGGCATGGTCGACGGCCTGGCG ATCTACGCCCGTGCGTACGCGCGCGGCTCCGGTGGCGGCCCGGACTCCGGGGTCGGCGCGCCCGCGACGGCCGGGCCGGG ACCGAGCGGGACGCCGGAGGAGGGTGTCGAGGCGTCCGGATCGGCCGGGCCGTGGCTGCTCCTGCTCCCGGCGGCGCTGG TCGCCGGGGCAGCGGGCTGGGGCGGGCTGGTGCTCGCACGCCGACGTCGGGCCAGGCGCGCGGCGCGGGCGGCGCTGGGG GTGGCGACCGACGACCTGGCCGCCGCGTGGCTCGAGGTGGAGGAGGGGAGCGAGTACGTCCACGCGCGGGTCGCCTCGCT GCCCTCGGTCGACGACGCGACCCTCAAGCAGATCCGCGCCGCCCACCAGACGGCCCGAGCCGGGCTCGAGCACGCGACCG CGGCGTACCTCACCCTCGCCCAGACCTACGACGTCACCCGGGTCCCGCAGCTGGGAACGGACGAGGCGACGGCCGGCGTC GGCCCGGTGACCGCCGTGGCGGCCGACCTGCGCGCCGCCCACGCCGAGCTGGCCGAGGTCGAGGCGGCGGTGACCGGGTT CGAGAGGCTCCGTGACGACCTCCCGGAGCAGATCGGCACGCTGCGTGGCGCGGCCGGGCGCCTGACCGGGCTGTTGGAGC GGCGGCGCGCCGACGGCTACCGCACCGCAGACCTGGACGGGGCGCCGGGCGCGGCCGAGCAGGCCGCTCGTGACGCGGAG ACGCTGGGCCGCCAGCTCCGCTTCGGCGACGCCGCGCTCCGCCTCGCGACGGCCGCCGAGGCGGTCGGCGAGCACTTGGC CTGGTTGGAGGGACTCGACGGCTACCGAACGGCGTTGGCCACCGACCTGGCCGCCCTCGAGGCCCGCCGGGCCGGCCTGG ACGCCGCCATCGCCGACGCGCGGGTGACGCTCGAGCACCTGGAGACGACGTACGACTCCTCCTGCGTCGCCGGCGTGCGC GACCGGGTCGAGGCCGCGGCGCTCGGCCGCGGGCAGCTGGACGGCGAGCTCGCGGCGATCCGCGGGGATGCCTCGATGGC GACCCAGGAGTTCCGGCGGGCGCGGGAGCGGATCGCCGCCGCGGCTCAGGCCGCGGACCGGATCACCACCGACGCCGCCA CCGCCGGGGAGCGCGAGCGGGAGCTGACCGAGCTGACCGCCCGGCTGCCGCTGACCGCGCAGCGCCTGGCGGCCGACGCC GCCGGCGTCGGCGCCCGGATCGAGGCCAACGCGACCGCGATCTCCTACCTCGACGTGGCGCTCCCGGTCGCCGAGCTCGA GGCGGAGGCGACCCGGCTTGGTGAGCGGGCCCGAGCGCCGAAGGCGCCGCTGCTCGCGGTGCGCGCCGACCTGGACACCC TCGGCCGGCGGATCGTGGAGAGTGCGGGGGTGGTCGAGGCGGTCATCGCCGCCTACGAGGACGCCCAGCGCCTGCTGACG GCGGCGGCCGCGGCGGCCGCCGACGCCCGCGACGAGGTGGACCGCGCGGACGTCGGCCGCGCCGCCCGCGCCACCCTCGC CGAGGCGGAGGAGGCACTGGCCCGAGCCGAGTCGGCCGACGCCCTGGACGCCGTGCGACGAGCGGCCGAGGAGGCGCGCG ACCTCGCCAACGACGCCGCGGCCCGCGCCCGCCGCGACGGGCGCGAGGCCGAGCAGCAGCGCGCGGCCGCGCGCCGCAGG TCGGCGGGCGGGTCGTTCTTCGGCGGGGGCGGCGGTGGGTTCGGCGGCTTCGGCGGGGGACGGGGCGGCTTCGGCGGCGG CGGGTCCGGGGGCTTCGGTGGCGGTGGTGGCTCTCGGGGCTTCGGCGGCGGGGGTGGCTCCCGGGGCGGCGGCGGAGGCG GGTCGCGCGGCTTCTGA
Upstream 100 bases:
>100_bases CCGAGGTCCCGATCGGCGGACTGAGACGCCGTCTTAATCCGCGTGCGCCAGATCACAGTCCCGGTGCGGCGGCGGTTGAT CAGCGGTCCGCCAGGGCACG
Downstream 100 bases:
>100_bases GCCGGTTCGCCTGACGGGGGCCTCCAGATCGGGGAGGCTGTGCGGATGAACCTGCCCCGGGTCGTCGTCGCCGTCCTGCT CCGCTCCCTCGTGATCGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 778; Mature: 778
Protein sequence:
>778_residues MCGMRRLLAVSGALLTLALGPAGPAPALTPLAPADEPICSGDPVFDAAGVLDDARIERAAAAFGDGIVVKVLSYRSTDGQ DLYDRIRDERERCAGWGFRPGRGESLLVLAVATEDRRLASHYDGRAMDRFEAAREHAEVDGMGASFGNARWTRGMVDGLA IYARAYARGSGGGPDSGVGAPATAGPGPSGTPEEGVEASGSAGPWLLLLPAALVAGAAGWGGLVLARRRRARRAARAALG VATDDLAAAWLEVEEGSEYVHARVASLPSVDDATLKQIRAAHQTARAGLEHATAAYLTLAQTYDVTRVPQLGTDEATAGV GPVTAVAADLRAAHAELAEVEAAVTGFERLRDDLPEQIGTLRGAAGRLTGLLERRRADGYRTADLDGAPGAAEQAARDAE TLGRQLRFGDAALRLATAAEAVGEHLAWLEGLDGYRTALATDLAALEARRAGLDAAIADARVTLEHLETTYDSSCVAGVR DRVEAAALGRGQLDGELAAIRGDASMATQEFRRARERIAAAAQAADRITTDAATAGERERELTELTARLPLTAQRLAADA AGVGARIEANATAISYLDVALPVAELEAEATRLGERARAPKAPLLAVRADLDTLGRRIVESAGVVEAVIAAYEDAQRLLT AAAAAAADARDEVDRADVGRAARATLAEAEEALARAESADALDAVRRAAEEARDLANDAAARARRDGREAEQQRAAARRR SAGGSFFGGGGGGFGGFGGGRGGFGGGGSGGFGGGGGSRGFGGGGGSRGGGGGGSRGF
Sequences:
>Translated_778_residues MCGMRRLLAVSGALLTLALGPAGPAPALTPLAPADEPICSGDPVFDAAGVLDDARIERAAAAFGDGIVVKVLSYRSTDGQ DLYDRIRDERERCAGWGFRPGRGESLLVLAVATEDRRLASHYDGRAMDRFEAAREHAEVDGMGASFGNARWTRGMVDGLA IYARAYARGSGGGPDSGVGAPATAGPGPSGTPEEGVEASGSAGPWLLLLPAALVAGAAGWGGLVLARRRRARRAARAALG VATDDLAAAWLEVEEGSEYVHARVASLPSVDDATLKQIRAAHQTARAGLEHATAAYLTLAQTYDVTRVPQLGTDEATAGV GPVTAVAADLRAAHAELAEVEAAVTGFERLRDDLPEQIGTLRGAAGRLTGLLERRRADGYRTADLDGAPGAAEQAARDAE TLGRQLRFGDAALRLATAAEAVGEHLAWLEGLDGYRTALATDLAALEARRAGLDAAIADARVTLEHLETTYDSSCVAGVR DRVEAAALGRGQLDGELAAIRGDASMATQEFRRARERIAAAAQAADRITTDAATAGERERELTELTARLPLTAQRLAADA AGVGARIEANATAISYLDVALPVAELEAEATRLGERARAPKAPLLAVRADLDTLGRRIVESAGVVEAVIAAYEDAQRLLT AAAAAAADARDEVDRADVGRAARATLAEAEEALARAESADALDAVRRAAEEARDLANDAAARARRDGREAEQQRAAARRR SAGGSFFGGGGGGFGGFGGGRGGFGGGGSGGFGGGGGSRGFGGGGGSRGGGGGGSRGF >Mature_778_residues MCGMRRLLAVSGALLTLALGPAGPAPALTPLAPADEPICSGDPVFDAAGVLDDARIERAAAAFGDGIVVKVLSYRSTDGQ DLYDRIRDERERCAGWGFRPGRGESLLVLAVATEDRRLASHYDGRAMDRFEAAREHAEVDGMGASFGNARWTRGMVDGLA IYARAYARGSGGGPDSGVGAPATAGPGPSGTPEEGVEASGSAGPWLLLLPAALVAGAAGWGGLVLARRRRARRAARAALG VATDDLAAAWLEVEEGSEYVHARVASLPSVDDATLKQIRAAHQTARAGLEHATAAYLTLAQTYDVTRVPQLGTDEATAGV GPVTAVAADLRAAHAELAEVEAAVTGFERLRDDLPEQIGTLRGAAGRLTGLLERRRADGYRTADLDGAPGAAEQAARDAE TLGRQLRFGDAALRLATAAEAVGEHLAWLEGLDGYRTALATDLAALEARRAGLDAAIADARVTLEHLETTYDSSCVAGVR DRVEAAALGRGQLDGELAAIRGDASMATQEFRRARERIAAAAQAADRITTDAATAGERERELTELTARLPLTAQRLAADA AGVGARIEANATAISYLDVALPVAELEAEATRLGERARAPKAPLLAVRADLDTLGRRIVESAGVVEAVIAAYEDAQRLLT AAAAAAADARDEVDRADVGRAARATLAEAEEALARAESADALDAVRRAAEEARDLANDAAARARRDGREAEQQRAAARRR SAGGSFFGGGGGGFGGFGGGRGGFGGGGSGGFGGGGGSRGFGGGGGSRGGGGGGSRGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 79621; Mature: 79621
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCGMRRLLAVSGALLTLALGPAGPAPALTPLAPADEPICSGDPVFDAAGVLDDARIERAA CCCHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHH AAFGDGIVVKVLSYRSTDGQDLYDRIRDERERCAGWGFRPGRGESLLVLAVATEDRRLAS HHHCCCCEEHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCHHHHH HYDGRAMDRFEAAREHAEVDGMGASFGNARWTRGMVDGLAIYARAYARGSGGGPDSGVGA HCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC PATAGPGPSGTPEEGVEASGSAGPWLLLLPAALVAGAAGWGGLVLARRRRARRAARAALG CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC VATDDLAAAWLEVEEGSEYVHARVASLPSVDDATLKQIRAAHQTARAGLEHATAAYLTLA CCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QTYDVTRVPQLGTDEATAGVGPVTAVAADLRAAHAELAEVEAAVTGFERLRDDLPEQIGT HHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRGAAGRLTGLLERRRADGYRTADLDGAPGAAEQAARDAETLGRQLRFGDAALRLATAAE HHCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH AVGEHLAWLEGLDGYRTALATDLAALEARRAGLDAAIADARVTLEHLETTYDSSCVAGVR HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHH DRVEAAALGRGQLDGELAAIRGDASMATQEFRRARERIAAAAQAADRITTDAATAGERER HHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH ELTELTARLPLTAQRLAADAAGVGARIEANATAISYLDVALPVAELEAEATRLGERARAP HHHHHHHHCCCHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KAPLLAVRADLDTLGRRIVESAGVVEAVIAAYEDAQRLLTAAAAAAADARDEVDRADVGR CCCEEEEHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AARATLAEAEEALARAESADALDAVRRAAEEARDLANDAAARARRDGREAEQQRAAARRR HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH SAGGSFFGGGGGGFGGFGGGRGGFGGGGSGGFGGGGGSRGFGGGGGSRGGGGGGSRGF HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MCGMRRLLAVSGALLTLALGPAGPAPALTPLAPADEPICSGDPVFDAAGVLDDARIERAA CCCHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHH AAFGDGIVVKVLSYRSTDGQDLYDRIRDERERCAGWGFRPGRGESLLVLAVATEDRRLAS HHHCCCCEEHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCHHHHH HYDGRAMDRFEAAREHAEVDGMGASFGNARWTRGMVDGLAIYARAYARGSGGGPDSGVGA HCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC PATAGPGPSGTPEEGVEASGSAGPWLLLLPAALVAGAAGWGGLVLARRRRARRAARAALG CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC VATDDLAAAWLEVEEGSEYVHARVASLPSVDDATLKQIRAAHQTARAGLEHATAAYLTLA CCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QTYDVTRVPQLGTDEATAGVGPVTAVAADLRAAHAELAEVEAAVTGFERLRDDLPEQIGT HHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRGAAGRLTGLLERRRADGYRTADLDGAPGAAEQAARDAETLGRQLRFGDAALRLATAAE HHCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH AVGEHLAWLEGLDGYRTALATDLAALEARRAGLDAAIADARVTLEHLETTYDSSCVAGVR HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHH DRVEAAALGRGQLDGELAAIRGDASMATQEFRRARERIAAAAQAADRITTDAATAGERER HHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH ELTELTARLPLTAQRLAADAAGVGARIEANATAISYLDVALPVAELEAEATRLGERARAP HHHHHHHHCCCHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KAPLLAVRADLDTLGRRIVESAGVVEAVIAAYEDAQRLLTAAAAAAADARDEVDRADVGR CCCEEEEHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AARATLAEAEEALARAESADALDAVRRAAEEARDLANDAAARARRDGREAEQQRAAARRR HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH SAGGSFFGGGGGGFGGFGGGRGGFGGGGSGGFGGGGGSRGFGGGGGSRGGGGGGSRGF HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA