Definition | Nocardioides sp. JS614 chromosome, complete genome. |
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Accession | NC_008699 |
Length | 4,985,871 |
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The map label for this gene is 119717206
Identifier: 119717206
GI number: 119717206
Start: 3170008
End: 3170412
Strand: Reverse
Name: 119717206
Synonym: Noca_2982
Alternate gene names: NA
Gene position: 3170412-3170008 (Counterclockwise)
Preceding gene: 119717207
Following gene: 119717205
Centisome position: 63.59
GC content: 73.83
Gene sequence:
>405_bases ATGAACCTGCCCCGGGTCGTCGTCGCCGTCCTGCTCCGCTCCCTCGTGATCGTCGGGGTGACGGCGGCCTACGTCGCCGC CGTCGCCCGCAGCGAGACCACCGACGCGCTCGGCGCCGGGCTGCTCGCGTTCCTCATCCTGGTCACGATCGCGTTCGTCT GGGCGGTGGTCGACGGCATCCGGCGCGGCCTCCTCGAGGCGTTGCTCACCTGGCTCCTCGCCTCGGTCGTCGCGGGGGTG GGCATCCCGGTGGCGCTCGCCCTCACCGACGACCGGGACCTGGCCGCAGAGGTGGGCGACGGGGCAGTCTTCTTCGCCGT CCTCCTCGTGGTGCCCGCCCTGCTCGGTCTCTCGGTGGGTGGCCTGGTGCACCGGCTCCGCGACCGCTCGGAGGTCGCCG CCTGA
Upstream 100 bases:
>100_bases CGGCGGCGGGGGTGGCTCCCGGGGCGGCGGCGGAGGCGGGTCGCGCGGCTTCTGAGCCGGTTCGCCTGACGGGGGCCTCC AGATCGGGGAGGCTGTGCGG
Downstream 100 bases:
>100_bases CCGACGCGTCGCGGCGGCTCGGGCAGGATGACCCCATGCGAGTGGGACTCACCGGCGGCATCGCCTCGGGCAAGAGCACG GTGTCGGCGATCCTGGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MNLPRVVVAVLLRSLVIVGVTAAYVAAVARSETTDALGAGLLAFLILVTIAFVWAVVDGIRRGLLEALLTWLLASVVAGV GIPVALALTDDRDLAAEVGDGAVFFAVLLVVPALLGLSVGGLVHRLRDRSEVAA
Sequences:
>Translated_134_residues MNLPRVVVAVLLRSLVIVGVTAAYVAAVARSETTDALGAGLLAFLILVTIAFVWAVVDGIRRGLLEALLTWLLASVVAGV GIPVALALTDDRDLAAEVGDGAVFFAVLLVVPALLGLSVGGLVHRLRDRSEVAA >Mature_134_residues MNLPRVVVAVLLRSLVIVGVTAAYVAAVARSETTDALGAGLLAFLILVTIAFVWAVVDGIRRGLLEALLTWLLASVVAGV GIPVALALTDDRDLAAEVGDGAVFFAVLLVVPALLGLSVGGLVHRLRDRSEVAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13779; Mature: 13779
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLPRVVVAVLLRSLVIVGVTAAYVAAVARSETTDALGAGLLAFLILVTIAFVWAVVDGI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRGLLEALLTWLLASVVAGVGIPVALALTDDRDLAAEVGDGAVFFAVLLVVPALLGLSVG HHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHH GLVHRLRDRSEVAA HHHHHHHHHHHCCC >Mature Secondary Structure MNLPRVVVAVLLRSLVIVGVTAAYVAAVARSETTDALGAGLLAFLILVTIAFVWAVVDGI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRGLLEALLTWLLASVVAGVGIPVALALTDDRDLAAEVGDGAVFFAVLLVVPALLGLSVG HHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHH GLVHRLRDRSEVAA HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA